Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N21
         (654 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g07020.1 68415.m00803 protein kinase family protein contains ...    31   0.51 
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa...    30   1.5  
At4g13130.1 68417.m02045 DC1 domain-containing protein contains ...    29   3.6  
At5g16710.1 68418.m01956 dehydroascorbate reductase, putative St...    28   4.7  
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ...    28   6.2  
At2g27035.1 68415.m03248 plastocyanin-like domain-containing pro...    28   6.2  
At2g23100.1 68415.m02756 DC1 domain-containing protein contains ...    27   8.2  

>At2g07020.1 68415.m00803 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 700

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +1

Query: 226 EYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENEKIE-RH 402
           +Y MD+Y  A  + I+ K TT+++ K   + +   E     +  +  +AI ENEK + R 
Sbjct: 300 KYTMDMYNSACKEAIAAKKTTIELHKWKEERKHKLE--EAILAKEAAMAIAENEKAKSRA 357

Query: 403 IMKSVPGGHNLFVQDKEVASLIE 471
            M+++   H +   + +    IE
Sbjct: 358 AMEALEAAHRMAETEAQKRKQIE 380


>At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 199

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 190 DGRRKGACLFCQEYFMD-LYLLAELKTISL 276
           +GRR+GAC++C   F++ LY   EL    L
Sbjct: 24  EGRREGACIYCGNTFLERLYENVELSPFDL 53


>At4g13130.1 68417.m02045 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 767

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 211 CLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILI 357
           C  C EY MD Y        ++ V+   ++KPPP    +    H   LI
Sbjct: 278 CYCCDEYLMDYYYYCSSCDFAMNVSC--LEKPPPVLSIDHPKWHQHPLI 324


>At5g16710.1 68418.m01956 dehydroascorbate reductase, putative
           Strong similarity to dehydroascorbate reductase
           [Spinacia oleracea] gi:10952512 gb:AAG24945
          Length = 258

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 160 IELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDF 318
           +E+ +KAS     + G C FCQ+    + L  E K +   +  VD+   P  F
Sbjct: 49  LEICVKASITTPNKLGDCPFCQK----VLLTMEEKNVPYDMKMVDLSNKPEWF 97


>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 599

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 213 TGALSSSIDRRC---LYYKLDFRNVSISCTIFC 124
           T  + S  + RC   +Y+K+D RNV  SC + C
Sbjct: 566 TRPVCSRCEDRCQGSIYFKVDVRNVCASCLLKC 598


>At2g27035.1 68415.m03248 plastocyanin-like domain-containing
           protein low similarity to SP:P80728 Mavicyanin
           {Cucurbita pepo}; contains Pfam profile PF02298:
           Plastocyanin-like domain
          Length = 163

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 259 LKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGL 369
           LK + L +T   + +PPP   TNF +T  P++  N +
Sbjct: 115 LKGMKLAITV--LPQPPPSAPTNFTSTTTPLIPPNAI 149


>At2g23100.1 68415.m02756 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 711

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 205 GACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPIL 354
           G C  CQ+ F D+Y    +   SL  T     KPPP   T+ + +H  IL
Sbjct: 223 GKCKCCQKRFEDIYYHCSVCNFSLNFTCT--IKPPPLTITHLK-SHSHIL 269


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,220,460
Number of Sequences: 28952
Number of extensions: 299090
Number of successful extensions: 790
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)