BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_N15 (649 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_07_0231 - 28547468-28547636,28547767-28547839,28548382-285484... 29 3.2 05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654 29 4.2 12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 5.6 04_04_0096 - 22777684-22777797,22778668-22779047,22779162-227793... 28 5.6 03_05_1156 - 30814037-30814190,30814277-30815166 28 5.6 01_06_1623 - 38716606-38717424 28 5.6 01_06_0849 + 32433429-32433743,32433840-32434021,32434235-324343... 28 5.6 10_01_0212 - 2278447-2279580 27 9.7 09_03_0101 + 12374771-12374926,12375505-12375731,12375816-123759... 27 9.7 02_05_0032 - 25221039-25221138,25221618-25222135 27 9.7 >05_07_0231 - 28547468-28547636,28547767-28547839,28548382-28548463, 28548880-28548970,28549042-28549118,28549493-28549534, 28550101-28550108,28550404-28550534,28551358-28551385, 28551580-28551689,28551843-28551988,28552670-28552711, 28552824-28552832,28552888-28553032,28553596-28553687 Length = 414 Score = 29.1 bits (62), Expect = 3.2 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +1 Query: 499 QVTLKPIGRDNDDLVSTVLLHLPQP 573 +V LKP+ + DL++TVLL LP P Sbjct: 63 RVMLKPLEDPHVDLIATVLLQLPLP 87 >05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654 Length = 381 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +1 Query: 385 IYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKPIG 522 + LPL KP P +L +E G +NW G T + IG Sbjct: 234 VALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIG 279 >12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915, 7694019-7694142,7696084-7696189,7696346-7696532 Length = 1184 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 516 WL*CHLLAPSNTFQP-IDCIPTNYFNSPQLN 427 WL H AP+N F+P + +PT FN+ + N Sbjct: 395 WLMDHRKAPNNMFRPLLSSVPTTTFNAGKGN 425 >04_04_0096 - 22777684-22777797,22778668-22779047,22779162-22779373, 22780119-22780561 Length = 382 Score = 28.3 bits (60), Expect = 5.6 Identities = 18/65 (27%), Positives = 29/65 (44%) Frame = +1 Query: 172 LQQDYRGVNIAVYALATAGLAISIHKIRPVSKFSKASKVPDHFIRNHEPLKGLYAGVQHS 351 L D+RG V +AT+GL + H I V + + V DH + + L +++ Sbjct: 218 LVPDFRGDPACVEKVATSGLHVFAHNIETVEELQR--NVRDHRANFKQSIDVLKLAKEYA 275 Query: 352 PVRVL 366 P L Sbjct: 276 PAGTL 280 >03_05_1156 - 30814037-30814190,30814277-30815166 Length = 347 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +2 Query: 527 IMMI*FLLYYC-IYLSLRVKMFKHWILVKNWWSLDLQ 634 I+M F +Y IY R KM +W+L + +DL+ Sbjct: 250 IIMAQFFMYLAEIYTERRQKMLANWVLTRKMTKMDLE 286 >01_06_1623 - 38716606-38717424 Length = 272 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 331 YAGVQHSPVRVLVNHKAPIYLP 396 YA SPVR++VN+K+P +P Sbjct: 196 YAAPDMSPVRIVVNNKSPSEIP 217 >01_06_0849 + 32433429-32433743,32433840-32434021,32434235-32434310, 32434413-32434570,32435567-32435738,32435817-32435927, 32436197-32436280 Length = 365 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +1 Query: 172 LQQDYRGVNIAVYALATAGLAISIHKIRPVSKFSKASKVP 291 L D+RG AV ALA +GL + H I V + + P Sbjct: 202 LTSDFRGDLEAVSALANSGLDVFAHNIETVRSLQRIVRDP 241 >10_01_0212 - 2278447-2279580 Length = 377 Score = 27.5 bits (58), Expect = 9.7 Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%) Frame = +1 Query: 526 DNDDLVSTVLLHL-PQPKS 579 D+DDL+S +LLHL P+P S Sbjct: 20 DDDDLLSEILLHLPPRPSS 38 >09_03_0101 + 12374771-12374926,12375505-12375731,12375816-12375971, 12376066-12376251,12376407-12376591,12376984-12376991 Length = 305 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +2 Query: 512 SQSEEIMMI*FLLYYCIYLSLRVKMFKHWILVKNWW----SLDLQKHHF 646 S E + + FLL+ ++ LR+ +F WIL + +LD +KH F Sbjct: 208 SSCEGLAVAAFLLFVASWILLRLIIFPFWILRSTSYEVLLTLDKEKHKF 256 >02_05_0032 - 25221039-25221138,25221618-25222135 Length = 205 Score = 27.5 bits (58), Expect = 9.7 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 505 TLKPIGRDNDDLVSTVLLHLPQPKSK-DVQTLDIGKKLVELGFAKAS 642 TL +G D+DD T + PQP S+ ++ +D+G G A A+ Sbjct: 19 TLLRLGGDDDDDACTKVTTTPQPVSECELPMIDVGCLTAPTGAAAAA 65 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,869,717 Number of Sequences: 37544 Number of extensions: 354629 Number of successful extensions: 742 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 728 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 742 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1608522592 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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