Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N15
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p pro...    70   2e-12
AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB...    70   2e-12
AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA...    70   2e-12
BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p pro...    30   2.4  
AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB...    30   2.4  
AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA...    30   2.4  

>AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p
           protein.
          Length = 239

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
 Frame = +1

Query: 172 LQQDYRGVNIAVYALATAGLAISIHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV 342
           L++D RG  +A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV
Sbjct: 19  LERDTRGSELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGV 78

Query: 343 --QHSPVRVLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKP 516
             Q     +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P
Sbjct: 79  KQQEQDTLLMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLP 135

Query: 517 I-GRDNDDLVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 636
           +      D V   L  +  P+    + LD+ + L++L FA+
Sbjct: 136 LKSAKGQDFVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB,
           isoform B protein.
          Length = 239

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
 Frame = +1

Query: 172 LQQDYRGVNIAVYALATAGLAISIHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV 342
           L++D RG  +A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV
Sbjct: 19  LERDTRGSELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGV 78

Query: 343 --QHSPVRVLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKP 516
             Q     +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P
Sbjct: 79  KQQEQDTLLMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLP 135

Query: 517 I-GRDNDDLVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 636
           +      D V   L  +  P+    + LD+ + L++L FA+
Sbjct: 136 LKSAKGQDFVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA,
           isoform A protein.
          Length = 239

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
 Frame = +1

Query: 172 LQQDYRGVNIAVYALATAGLAISIHKIRP---VSKFSKASKVPDHFIRNHEPLKGLYAGV 342
           L++D RG  +A+Y  +   LA++  K +P   V +F + S +P+  I       G  AGV
Sbjct: 19  LERDTRGSELAIYGTSAIMLAVAYAKRKPAYLVRQFKQPSHIPERLINERVMHTGKIAGV 78

Query: 343 --QHSPVRVLVNHKAPIYLPLWHSSKPPLPVKLWGIEVVSGNAVNWLECVARGQQVTLKP 516
             Q     +++ H+ P++ P++ SSK  LPVKL G+  V+ N  +WL+    G++ T  P
Sbjct: 79  KQQEQDTLLMIQHR-PLF-PIFTSSKRLLPVKLPGVR-VNANGYSWLQQCLIGREATFLP 135

Query: 517 I-GRDNDDLVSTVLLHLPQPKSKDVQTLDIGKKLVELGFAK 636
           +      D V   L  +  P+    + LD+ + L++L FA+
Sbjct: 136 LKSAKGQDFVVCQLCLVHPPRGN--RLLDVSETLLKLRFAR 174


>BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p
           protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 PPLVSPYLFIRFALLASFRKPVKFQIISSE 307
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 771 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 800


>AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB,
           isoform B protein.
          Length = 725

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 PPLVSPYLFIRFALLASFRKPVKFQIISSE 307
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 571 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 600


>AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA,
           isoform A protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 218 PPLVSPYLFIRFALLASFRKPVKFQIISSE 307
           PPL  P LFIR+  LA+F   ++F  + SE
Sbjct: 771 PPLPDPELFIRWLQLATFMPAMQFSHLPSE 800


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,609,500
Number of Sequences: 53049
Number of extensions: 616246
Number of successful extensions: 1422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)