BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_N12 (651 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 337 1e-91 UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 308 1e-82 UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 265 7e-70 UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 237 2e-61 UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 222 5e-57 UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 145 7e-34 UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 98 2e-19 UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 97 4e-19 UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 93 5e-18 UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 92 9e-18 UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 89 1e-16 UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 89 1e-16 UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 87 3e-16 UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 85 1e-15 UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 85 1e-15 UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 83 7e-15 UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 82 1e-14 UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 80 5e-14 UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 74 3e-12 UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 72 1e-11 UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 69 1e-10 UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 67 4e-10 UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09 UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 62 8e-09 UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le... 40 0.052 UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742... 36 1.1 UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost... 35 1.9 UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6 UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000... 34 3.4 UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4 UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4 UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ... 33 4.5 UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi... 33 5.9 UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma j... 33 7.8 >UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens (Human) Length = 403 Score = 337 bits (828), Expect = 1e-91 Identities = 146/208 (70%), Positives = 175/208 (84%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383 DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120 Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563 NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+ Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180 Query: 564 MEIQLNGGTIEDKVKWAREHLEKPIPVD 647 MEIQ+NGGT+ +K+ WARE LE+ +PV+ Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVN 208 >UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bilateria|Rep: 60S ribosomal protein L3-like - Homo sapiens (Human) Length = 407 Score = 308 bits (755), Expect = 1e-82 Identities = 136/209 (65%), Positives = 165/209 (78%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 MSHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383 RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120 Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563 +W+ W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHI Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180 Query: 564 MEIQLNGGTIEDKVKWAREHLEKPIPVDS 650 MEIQLNGGT+ +KV WA+ LEK +PV S Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHS 209 >UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3; n=1; Caenorhabditis elegans|Rep: Putative uncharacterized protein rpl-3 - Caenorhabditis elegans Length = 353 Score = 265 bits (649), Expect = 7e-70 Identities = 115/168 (68%), Positives = 135/168 (80%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383 D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 527 NW WQDE G+K IE DF K+ +YCS +RVIAHTQM Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168 >UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Trypanosomatidae|Rep: Ribosomal protein L3, putative - Trypanosoma brucei Length = 480 Score = 237 bits (579), Expect = 2e-61 Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 3/214 (1%) Frame = +3 Query: 18 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 197 ++MSH KF PRHG +GF P+KRSR+ RG+ ++FPKDDPS+ HLT+F+ YKAGMTH+VR Sbjct: 50 TNMSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVR 109 Query: 198 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 377 + DRPGSK+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRF Sbjct: 110 DVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRF 169 Query: 378 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ--- 548 YKNW + GR + + K + ++RV+AHTQ++ L+ + Sbjct: 170 YKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGV 229 Query: 549 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDS 650 KKAH+ EIQ+NGGTI K++ A+ LEK + +DS Sbjct: 230 KKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDS 263 >UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2; Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry - Rattus norvegicus Length = 380 Score = 222 bits (543), Expect = 5e-57 Identities = 102/187 (54%), Positives = 133/187 (71%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 MS+R FSAPRHGS+GF P+K S H GKVK FPKDD SKPVHLT F+ +KA MTH++++ Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383 DRP SK+NKKE+VE V I+ETPPMV +G+VGYIE P GL V+AEH+S ++ FYK Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120 Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563 NW+ ++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+ Sbjct: 121 NWHSEKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHL 174 Query: 564 MEIQLNG 584 MEIQ+ G Sbjct: 175 MEIQVMG 181 >UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep: 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B) (TARBP-B). - Bos Taurus Length = 340 Score = 145 bits (352), Expect = 7e-34 Identities = 83/189 (43%), Positives = 113/189 (59%) Frame = +3 Query: 81 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 260 K S +H+GKV FPKD SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+ Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60 Query: 261 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 440 ET P + VG VG ET GL+ +V+A+H+S +C+R K Y W+ Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117 Query: 441 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 620 G ++ TQM LL QKKAH+ E Q+N G + K+ WA + Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155 Query: 621 HLEKPIPVD 647 LE+ +PV+ Sbjct: 156 KLEQQVPVN 164 >UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured marine group II euryarchaeote DeepAnt-JyKC7|Rep: Ribosomal protein L3 - uncultured marine group II euryarchaeote DeepAnt-JyKC7 Length = 358 Score = 97.9 bits (233), Expect = 2e-19 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 P+ GSMGF P+KR+ R G++ ++P+ + S+ + + F G+KAGMTHV+ P S Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65 Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 401 +EI +AVT++E PPM + V GY TP+G++ +WA+ S + RF Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125 Query: 402 XXXXXX--XXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 566 + + + D + ++ VR+I TQ L+K K IM Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185 Query: 567 EIQLNGGTIEDKVKWAREHLEKPIPVD 647 E+ L GG K++WA E L I +D Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGID 212 >UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum pernix Length = 344 Score = 96.7 bits (230), Expect = 4e-19 Identities = 57/119 (47%), Positives = 72/119 (60%), Gaps = 2/119 (1%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 M RK APR GS+GF P+KR+ R +VK +P+ D KPV L AF+GY+AGMTHV Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRR 374 DRPG + KEI VTI+ETPPM V Y P+ G +L WA+ E + +RR Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118 >UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured marine group II euryarchaeote HF70_59C08|Rep: Ribosomal protein L3 - uncultured marine group II euryarchaeote HF70_59C08 Length = 338 Score = 93.1 bits (221), Expect = 5e-18 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 1/201 (0%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 P+ GSMGF P+KR+ R G+VK++P+ D S V + F G+KAGMTHV+ PGS Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65 Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407 E+ +AVT++E PPM + V GY TP+G + WA S D + Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122 Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM-KLLKQRQKKAHIMEIQLNG 584 D+L + + VR+I +Q K+ K IME+ L G Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171 Query: 585 GTIEDKVKWAREHLEKPIPVD 647 G + ++ WA E L + + ++ Sbjct: 172 GDLGAQLDWAAEKLGEELGIE 192 >UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarchaeota|Rep: 50S ribosomal protein L3P - Methanococcus jannaschii Length = 335 Score = 92.3 bits (219), Expect = 9e-18 Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 PR GS+ F P+KR++R +++++P++D V L AF YKAGM+H + D P S Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64 Query: 228 KKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 401 +E+ +TI+E PP+ VC + V G E + L L VWA+++ ++ R+ Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI-------- 115 Query: 402 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 581 + RK++E D + + VRV+ HT KL +KK I+EI++ Sbjct: 116 ---------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165 Query: 582 GGTIEDKVKWAREHLEKPIPV 644 G IE+++ +A+E L K + + Sbjct: 166 GKDIEERLNYAKEILGKQLNI 186 >UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylothermus marinus F1|Rep: 50S ribosomal protein L3 - Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) Length = 395 Score = 88.6 bits (210), Expect = 1e-16 Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 41/249 (16%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVH 149 M HRK+SAPRHGS+G P+KR+ + +++++P K KPV Sbjct: 1 MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59 Query: 150 LTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRA 326 L ++ YKAGM+H + DRP + + KEI VT+++ PP++ +G+ GY I HGL + Sbjct: 60 LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119 Query: 327 LLTVW---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRK 455 VW E + E + + N + E G K Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179 Query: 456 SIEKDFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 620 +E ++K+ + +RVIA T L +KK I+EI++ GGT+ +++ +A + Sbjct: 180 FLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEK 239 Query: 621 HLEKPIPVD 647 L + VD Sbjct: 240 LLGNYVTVD 248 >UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarchaeota|Rep: 50S ribosomal protein L3P - Halobacterium salinarium (Halobacterium halobium) Length = 335 Score = 88.6 bits (210), Expect = 1e-16 Identities = 66/195 (33%), Positives = 93/195 (47%), Gaps = 1/195 (0%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 PR GSMGF P+KR+ + ++P DD V L F GYKAGMTHVV D+ + Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64 Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407 E VT++ETPPM V Y +TP+G + L VWA+ E R Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR-----------T 113 Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 584 DEL IE + I + +RVI HT +K +ME ++ G Sbjct: 114 LSVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166 Query: 585 GTIEDKVKWAREHLE 629 GT+ D++++A + +E Sbjct: 167 GTLADRLEFAADLIE 181 >UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermococcaceae|Rep: 50S ribosomal protein L3P - Pyrococcus furiosus Length = 365 Score = 87.0 bits (206), Expect = 3e-16 Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 10/213 (4%) Frame = +3 Query: 36 KFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 215 K PR GS+GF P+KR++ +++++PK+ V + F GYKAGMTH++ D PG Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59 Query: 216 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK- 383 N KEI VTIIETPP+ G+ Y GL V D + R K Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118 Query: 384 ----NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQR 545 +Y + E+ + + + + MI+ + VR I TQ ++K + Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK 177 Query: 546 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPV 644 KK +ME + G ++E+K + +E L K + V Sbjct: 178 -KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRV 209 >UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryarchaeota|Rep: 50S ribosomal protein L3P - Methanopyrus kandleri Length = 361 Score = 85.4 bits (202), Expect = 1e-15 Identities = 59/197 (29%), Positives = 92/197 (46%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 PR GS+ F P+KR+ R +++++P ++ V + F GYKAGMTH + D P S Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68 Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407 +EI VTI++ PPM + Y TP G R + WAE E R + Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123 Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587 +EL + I ++ +RVI TQ K +KK +ME ++ G Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173 Query: 588 TIEDKVKWAREHLEKPI 638 + ++ ++A E L + I Sbjct: 174 DVRERFEYAVEILSEEI 190 >UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus solfataricus Length = 351 Score = 85.0 bits (201), Expect = 1e-15 Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 5/212 (2%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 M HRK ++PR GS G P+KRS + +P+ + P L F+GYK GMTHV Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRR 374 D P S N KEI VT++E PP++ + + Y G ++T W+ + D RR Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119 Query: 375 FYK-NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQK 551 + + + + +L I+ + +++ + R++ TQ + + K Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGK 173 Query: 552 KA-HIMEIQLNGGTIEDKVKWAREHLEKPIPV 644 KA ++EIQ+ GG + ++ +A L K I + Sbjct: 174 KAPDLVEIQIGGGEKKSQLDYALNILGKEITI 205 >UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein L3P - Ignicoccus hospitalis KIN4/I Length = 358 Score = 82.6 bits (195), Expect = 7e-15 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 M RK APR GS G P+KR+ +V+++P D KP+ AF+GYK GMTHV+ Sbjct: 1 MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW 341 DR +EI VT+IETPPMV +G V GY + G AL VW Sbjct: 58 DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVW 104 >UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum pendens Hrk 5|Rep: 50S ribosomal protein L3 - Thermofilum pendens (strain Hrk 5) Length = 334 Score = 81.8 bits (193), Expect = 1e-14 Identities = 61/199 (30%), Positives = 94/199 (47%) Frame = +3 Query: 48 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227 PR GS +YP+KR+R +V+ +P++ F GYK GM HV+ S Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62 Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407 +E A T+IE PP+ V V Y +TP+G + L VWA+ + +D R F Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112 Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587 +D+ + K +++ S VRV+A TQ +L +KK ++EI + GG Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165 Query: 588 TIEDKVKWAREHLEKPIPV 644 E + A E L K + + Sbjct: 166 PPEKALSLALEKLGKDLTI 184 >UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3 - Candidatus Nitrosopumilus maritimus SCM1 Length = 331 Score = 79.8 bits (188), Expect = 5e-14 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 M RK +PR GS+ + P+ R++ +++A+PK D +P + A G+KAG +V Sbjct: 1 MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-Y 380 DR K++V T++ TPP++ +G+ GY + GL A V+AE + + + Sbjct: 60 DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISL 119 Query: 381 KNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 560 KN + E + EK KK+ ++V I+ + L QKK + Sbjct: 120 KN----------------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPY 159 Query: 561 IMEIQLNGGTIEDKVKWAREHLEKPIPVD 647 I E ++GG I + +E L K I +D Sbjct: 160 IFEASVSGGDIPKQFAHVKELLGKEIKID 188 >UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarchaeota|Rep: 50S ribosomal protein L3P - Uncultured methanogenic archaeon RC-I Length = 337 Score = 73.7 bits (173), Expect = 3e-12 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = +3 Query: 45 APRHGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 218 APR GS+G+ P+ R+R + K++ + + D P + F+G+KAGM+H+V DRP S Sbjct: 6 APRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHS 61 Query: 219 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVW 341 EI VTI+E P M G+ Y ++P+G + + W Sbjct: 62 ATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAW 102 >UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum symbiosum Length = 328 Score = 71.7 bits (168), Expect = 1e-11 Identities = 37/113 (32%), Positives = 62/113 (54%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 M HRKFS PR GS+ + P+ R+R +++ +P+ +P L A G+KAG +V Sbjct: 1 MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 362 DR + K++V T++ TPP+ +G+ GY + +G V+AE + + Sbjct: 59 DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111 >UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella natans|Rep: Ribosomal protein L3 - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 370 Score = 68.5 bits (160), Expect = 1e-10 Identities = 39/105 (37%), Positives = 56/105 (53%) Frame = +3 Query: 24 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203 MSHRKF PR GS+GF PKKRS R K + + +++ F K THV+R Sbjct: 1 MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60 Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 338 + SK + I++ VT++E PP+ VG+ Y + L L T+ Sbjct: 61 NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105 >UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P - Nanoarchaeum equitans Length = 321 Score = 66.9 bits (156), Expect = 4e-10 Identities = 36/113 (31%), Positives = 61/113 (53%) Frame = +3 Query: 45 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 224 APR GSMGF+P+KR+ R ++K +PK + KP+ AF YK GMTH + I Sbjct: 8 APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNI 57 Query: 225 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383 N + + VT++E P ++ +G Y + L+ + +++ + + R+ K Sbjct: 58 NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK 110 >UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; Candida albicans|Rep: Putative uncharacterized protein - Candida albicans (Yeast) Length = 173 Score = 65.3 bits (152), Expect = 1e-09 Identities = 40/108 (37%), Positives = 53/108 (49%) Frame = -2 Query: 650 RIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVGNDSYNTTVADHLLE 471 R++R+ F ++F GP +FV DGTTV LDF V V DS N +V + Sbjct: 68 RVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDSDNRSVLLDSGQ 127 Query: 470 IFFY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQ 327 F F + F F E LL F+PV VE++S F + PDS Q Sbjct: 128 FSFNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDSGQ 173 >UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermoplasmatales|Rep: 50S ribosomal protein L3P - Thermoplasma volcanium Length = 331 Score = 62.5 bits (145), Expect = 8e-09 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +3 Query: 51 RHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINK 230 R GSM +YP+ R++ +++++P + S PV + F G+K GMTHV R S Sbjct: 8 RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65 Query: 231 KEIVEAVTIIETPPMVCVGVVGYIETPHG-LRALLTVWAEHMSED 362 + I VT+IE PP+ +G+ Y E G + + W +++ ++ Sbjct: 66 QPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKE 110 >UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130041A08 product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1; Mus musculus|Rep: 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130041A08 product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus musculus (Mouse) Length = 109 Score = 39.9 bits (89), Expect = 0.052 Identities = 20/46 (43%), Positives = 27/46 (58%) Frame = +3 Query: 96 HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 233 HR + K FPK+D K HL F+ +A MT+ V E +R G K +K Sbjct: 8 HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53 >UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742_G01.32; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice) Length = 100 Score = 35.5 bits (78), Expect = 1.1 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 230 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWTTRSVD 334 E DRG CHH+ S GLCR C + P+ T V+ Sbjct: 36 EGDRGCCHHYLTGSPGLCRRCPLRAHPAATGFEVE 70 >UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clostridiaceae|Rep: Purine catabolism PurC-like - Clostridium oremlandii OhILAs Length = 551 Score = 34.7 bits (76), Expect = 1.9 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +3 Query: 495 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPI 638 SV + I + Q LL QR +K H +M + L GG+IED + RE+L P+ Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPL 174 >UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 1205 Score = 34.3 bits (75), Expect = 2.6 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 81 KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 254 K +++ K+K +++ K + AFI A ++ +R DR ++N I + T Sbjct: 19 KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78 Query: 255 IIETPPMVCVGVVG 296 +ETPP V + VVG Sbjct: 79 AVETPPYV-IAVVG 91 >UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP00000006197; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to ENSANGP00000006197 - Nasonia vitripennis Length = 1307 Score = 33.9 bits (74), Expect = 3.4 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = -1 Query: 408 PSSCICTSFCRSDVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSEESR 259 PS+ I T SD++ L P QS+ V+ +GS+ HR K SEE R Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886 >UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized protein - Sulfurovum sp. (strain NBC37-1) Length = 135 Score = 33.9 bits (74), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 432 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587 WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79 >UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; Vanderwaltozyma polyspora DSM 70294|Rep: Putative uncharacterized protein - Vanderwaltozyma polyspora DSM 70294 Length = 253 Score = 33.9 bits (74), Expect = 3.4 Identities = 20/68 (29%), Positives = 37/68 (54%) Frame = +3 Query: 444 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 623 L RKSIE + + IR+ +V I +K++++++ + E +L GT + + A Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194 Query: 624 LEKPIPVD 647 EKPI ++ Sbjct: 195 KEKPISLE 202 >UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; Arabidopsis thaliana|Rep: Putative F-box protein At1g33020 - Arabidopsis thaliana (Mouse-ear cress) Length = 518 Score = 33.5 bits (73), Expect = 4.5 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -3 Query: 649 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 524 E TG+ S+C +H +S + PL W+SI+ F + SF+ Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514 >UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis invicta virus 1|Rep: Structural polyprotein - Solenopsis invicta virus 1 Length = 1137 Score = 33.1 bits (72), Expect = 5.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -2 Query: 275 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 126 HRR + ++ D+ LVD T++ VG GLITD +S ++ A V Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524 >UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma japonicum|Rep: SJCHGC03405 protein - Schistosoma japonicum (Blood fluke) Length = 321 Score = 32.7 bits (71), Expect = 7.8 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 42 SAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 164 SA H + G+Y + + RR G AF K D LTAF+ Sbjct: 225 SAQSHITSGYYQQMKYRRDDGSFSAFGKSDKHGSTWLTAFV 265 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 695,721,833 Number of Sequences: 1657284 Number of extensions: 14186632 Number of successful extensions: 35572 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34275 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 35535 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 48760335122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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