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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N12
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary...   337   1e-91
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi...   308   1e-82
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;...   265   7e-70
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr...   237   2e-61
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n...   222   5e-57
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ...   145   7e-34
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m...    98   2e-19
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop...    97   4e-19
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m...    93   5e-18
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc...    92   9e-18
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo...    89   1e-16
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    89   1e-16
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc...    87   3e-16
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar...    85   1e-15
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop...    85   1e-15
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ...    83   7e-15
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi...    82   1e-14
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N...    80   5e-14
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc...    74   3e-12
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha...    72   1e-11
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella...    69   1e-10
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc...    67   4e-10
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ...    65   1e-09
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop...    62   8e-09
UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN full-le...    40   0.052
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742...    36   1.1  
UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2; Clost...    35   1.9  
UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to ENSANGP000...    34   3.4  
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4; ...    33   4.5  
UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsi...    33   5.9  
UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma j...    33   7.8  

>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
           Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
           (Human)
          Length = 403

 Score =  337 bits (828), Expect = 1e-91
 Identities = 146/208 (70%), Positives = 175/208 (84%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE 
Sbjct: 1   MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383
           DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR   TV+AEH+S++C+RRFYK
Sbjct: 61  DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120

Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563
           NW+             WQDE G+K +EKDF  M +YC V+RVIAHTQM+LL  RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180

Query: 564 MEIQLNGGTIEDKVKWAREHLEKPIPVD 647
           MEIQ+NGGT+ +K+ WARE LE+ +PV+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVN 208


>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
           Bilateria|Rep: 60S ribosomal protein L3-like - Homo
           sapiens (Human)
          Length = 407

 Score =  308 bits (755), Expect = 1e-82
 Identities = 136/209 (65%), Positives = 165/209 (78%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           MSHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE 
Sbjct: 1   MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383
            RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+  T++AEH+S++CRRRFYK
Sbjct: 61  HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120

Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563
           +W+             W+D  G+K ++KDF  M +YC V+RVI HTQMKLL  RQKKAHI
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180

Query: 564 MEIQLNGGTIEDKVKWAREHLEKPIPVDS 650
           MEIQLNGGT+ +KV WA+  LEK +PV S
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHS 209


>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein rpl-3 - Caenorhabditis elegans
          Length = 353

 Score =  265 bits (649), Expect = 7e-70
 Identities = 115/168 (68%), Positives = 135/168 (80%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           MSHRKFSAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ 
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383
           D+PGSK+NKKE+VEAVTI+ETPPMV  GV GY++TP G RAL T+WAEH+SE+ RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 527
           NW              WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168


>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
           Trypanosomatidae|Rep: Ribosomal protein L3, putative -
           Trypanosoma brucei
          Length = 480

 Score =  237 bits (579), Expect = 2e-61
 Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 3/214 (1%)
 Frame = +3

Query: 18  SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 197
           ++MSH KF  PRHG +GF P+KRSR+ RG+ ++FPKDDPS+  HLT+F+ YKAGMTH+VR
Sbjct: 50  TNMSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVR 109

Query: 198 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 377
           + DRPGSK+NKKE+VE VTI+E PPMV VG+VGY +TP G + + TVWA H S + RRRF
Sbjct: 110 DVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRF 169

Query: 378 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ--- 548
           YKNW               +   GR +  +  K   +   ++RV+AHTQ++ L+  +   
Sbjct: 170 YKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGV 229

Query: 549 KKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDS 650
           KKAH+ EIQ+NGGTI  K++ A+  LEK + +DS
Sbjct: 230 KKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDS 263


>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
           Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
           Rattus norvegicus
          Length = 380

 Score =  222 bits (543), Expect = 5e-57
 Identities = 102/187 (54%), Positives = 133/187 (71%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           MS+R FSAPRHGS+GF P+K S  H GKVK FPKDD SKPVHLT F+ +KA MTH++++ 
Sbjct: 1   MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383
           DRP SK+NKKE+VE V I+ETPPMV +G+VGYIE P GL     V+AEH+S   ++ FYK
Sbjct: 61  DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120

Query: 384 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 563
           NW+                ++G++ +E +FK M +YC V+ ++AHTQM LL   QKKAH+
Sbjct: 121 NWHSEKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHL 174

Query: 564 MEIQLNG 584
           MEIQ+ G
Sbjct: 175 MEIQVMG 181


>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
           RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
           60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
           B) (TARBP-B). - Bos Taurus
          Length = 340

 Score =  145 bits (352), Expect = 7e-34
 Identities = 83/189 (43%), Positives = 113/189 (59%)
 Frame = +3

Query: 81  KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 260
           K S +H+GKV  FPKD  SKPV+L+AF+GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1   KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60

Query: 261 ETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQD 440
           ET P + VG VG  ET  GL+   +V+A+H+S +C+R   K  Y             W+ 
Sbjct: 61  ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117

Query: 441 ELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 620
             G  ++                   TQM LL   QKKAH+ E Q+N G +  K+ WA +
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155

Query: 621 HLEKPIPVD 647
            LE+ +PV+
Sbjct: 156 KLEQQVPVN 164


>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote DeepAnt-JyKC7|Rep:
           Ribosomal protein L3 - uncultured marine group II
           euryarchaeote DeepAnt-JyKC7
          Length = 358

 Score = 97.9 bits (233), Expect = 2e-19
 Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 7/207 (3%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           P+ GSMGF P+KR+ R  G++ ++P+ + S+ + +  F G+KAGMTHV+     P S   
Sbjct: 7   PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65

Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMS--EDCRRRFYKNWYXXX 401
            +EI +AVT++E PPM  + V GY  TP+G++    +WA+  S  +    RF        
Sbjct: 66  GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125

Query: 402 XXXXXX--XXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQRQKKAH-IM 566
                        +  +    +  D    +   ++  VR+I  TQ  L+K    K   IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185

Query: 567 EIQLNGGTIEDKVKWAREHLEKPIPVD 647
           E+ L GG    K++WA E L   I +D
Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGID 212


>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
           pernix
          Length = 344

 Score = 96.7 bits (230), Expect = 4e-19
 Identities = 57/119 (47%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           M  RK  APR GS+GF P+KR+ R   +VK +P+ D  KPV L AF+GY+AGMTHV    
Sbjct: 1   MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPH-GLRALLTVWAEHMSE-DCRRR 374
           DRPG   + KEI   VTI+ETPPM    V  Y   P+ G  +L   WA+   E + +RR
Sbjct: 60  DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118


>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
           marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
           protein L3 - uncultured marine group II euryarchaeote
           HF70_59C08
          Length = 338

 Score = 93.1 bits (221), Expect = 5e-18
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           P+ GSMGF P+KR+ R  G+VK++P+ D S  V +  F G+KAGMTHV+     PGS   
Sbjct: 7   PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65

Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407
             E+ +AVT++E PPM  + V GY  TP+G +     WA   S D       +       
Sbjct: 66  GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122

Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM-KLLKQRQKKAHIMEIQLNG 584
                     D+L    + +           VR+I  +Q  K+     K   IME+ L G
Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171

Query: 585 GTIEDKVKWAREHLEKPIPVD 647
           G +  ++ WA E L + + ++
Sbjct: 172 GDLGAQLDWAAEKLGEELGIE 192


>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanococcus jannaschii
          Length = 335

 Score = 92.3 bits (219), Expect = 9e-18
 Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 2/201 (0%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           PR GS+ F P+KR++R   +++++P++D    V L AF  YKAGM+H   + D P S   
Sbjct: 8   PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64

Query: 228 KKEIVEAVTIIETPPM-VC-VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXX 401
            +E+   +TI+E PP+ VC + V G  E  + L  L  VWA+++ ++  R+         
Sbjct: 65  GQEVFTPITILEAPPINVCAIRVYGRNERNY-LTTLTEVWADNLDKELERKI-------- 115

Query: 402 XXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLN 581
                        +  RK++E D + +      VRV+ HT  KL    +KK  I+EI++ 
Sbjct: 116 ---------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRIG 165

Query: 582 GGTIEDKVKWAREHLEKPIPV 644
           G  IE+++ +A+E L K + +
Sbjct: 166 GKDIEERLNYAKEILGKQLNI 186


>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
           Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
           - Staphylothermus marinus (strain ATCC 43588 / DSM 3639
           / F1)
          Length = 395

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 41/249 (16%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFP------------------KDDPSKPVH 149
           M HRK+SAPRHGS+G  P+KR+ +   +++++P                  K    KPV 
Sbjct: 1   MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59

Query: 150 LTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGY-IETPHGLRA 326
           L  ++ YKAGM+H +   DRP +  + KEI   VT+++ PP++ +G+ GY I   HGL +
Sbjct: 60  LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119

Query: 327 LLTVW---AEHMSEDCRRRFYKNWYXXXXXXXXXXXXXW--------------QDELGRK 455
              VW    E + E   + +  N +                              E G K
Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179

Query: 456 SIEKDFKKMIRYCSV-----VRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWARE 620
            +E ++K+ +          +RVIA T   L    +KK  I+EI++ GGT+ +++ +A +
Sbjct: 180 FLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERIDYAEK 239

Query: 621 HLEKPIPVD 647
            L   + VD
Sbjct: 240 LLGNYVTVD 248


>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Halobacterium salinarium (Halobacterium halobium)
          Length = 335

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 66/195 (33%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           PR GSMGF P+KR+     +  ++P DD    V L  F GYKAGMTHVV   D+  +   
Sbjct: 7   PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64

Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407
             E    VT++ETPPM    V  Y +TP+G + L  VWA+   E   R            
Sbjct: 65  GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR-----------T 113

Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHT-QMKLLKQRQKKAHIMEIQLNG 584
                     DEL    IE    + I   + +RVI HT         +K   +ME ++ G
Sbjct: 114 LSVPDEGGDTDEL----IEALDTEEI---ADIRVITHTVPGDTAGVPKKNPDVMETRVGG 166

Query: 585 GTIEDKVKWAREHLE 629
           GT+ D++++A + +E
Sbjct: 167 GTLADRLEFAADLIE 181


>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
           Thermococcaceae|Rep: 50S ribosomal protein L3P -
           Pyrococcus furiosus
          Length = 365

 Score = 87.0 bits (206), Expect = 3e-16
 Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
 Frame = +3

Query: 36  KFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPG 215
           K   PR GS+GF P+KR++    +++++PK+     V +  F GYKAGMTH++   D PG
Sbjct: 3   KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59

Query: 216 SKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED---CRRRFYK- 383
              N KEI   VTIIETPP+   G+  Y     GL     V       D    + R  K 
Sbjct: 60  -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118

Query: 384 ----NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSV--VRVIAHTQMKLLKQR 545
                +Y             +  E+  + + +  + MI+   +  VR I  TQ  ++K +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVIKLK 177

Query: 546 QKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPV 644
            KK  +ME  + G ++E+K  + +E L K + V
Sbjct: 178 -KKPEVMEYAIGGTSVEEKFNYIKEKLGKELRV 209


>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Methanopyrus kandleri
          Length = 361

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 59/197 (29%), Positives = 92/197 (46%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           PR GS+ F P+KR+ R   +++++P ++    V +  F GYKAGMTH +   D P S   
Sbjct: 12  PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68

Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407
            +EI   VTI++ PPM    +  Y  TP G R +   WAE   E    R +         
Sbjct: 69  GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF-----TVPK 123

Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587
                     +EL  + I ++          +RVI  TQ K     +KK  +ME ++ G 
Sbjct: 124 DGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYRIGGK 173

Query: 588 TIEDKVKWAREHLEKPI 638
            + ++ ++A E L + I
Sbjct: 174 DVRERFEYAVEILSEEI 190


>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
           Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
           solfataricus
          Length = 351

 Score = 85.0 bits (201), Expect = 1e-15
 Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           M HRK ++PR GS G  P+KRS       + +P+ +   P  L  F+GYK GMTHV    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLT-VWAEHMSE--DCRRR 374
           D P S  N KEI   VT++E PP++ + +  Y     G   ++T  W+    +  D  RR
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119

Query: 375 FYK-NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQK 551
            +  + +             +  +L    I+ +  +++ +    R++  TQ + +    K
Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGK 173

Query: 552 KA-HIMEIQLNGGTIEDKVKWAREHLEKPIPV 644
           KA  ++EIQ+ GG  + ++ +A   L K I +
Sbjct: 174 KAPDLVEIQIGGGEKKSQLDYALNILGKEITI 205


>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
           Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
           L3P - Ignicoccus hospitalis KIN4/I
          Length = 358

 Score = 82.6 bits (195), Expect = 7e-15
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           M  RK  APR GS G  P+KR+     +V+++P  D  KP+   AF+GYK GMTHV+   
Sbjct: 1   MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVG--VVGYIETPHGLRALLTVW 341
           DR       +EI   VT+IETPPMV +G  V GY +   G  AL  VW
Sbjct: 58  DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGY-DPNRGRYALTEVW 104


>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
           pendens Hrk 5|Rep: 50S ribosomal protein L3 -
           Thermofilum pendens (strain Hrk 5)
          Length = 334

 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 61/199 (30%), Positives = 94/199 (47%)
 Frame = +3

Query: 48  PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 227
           PR GS  +YP+KR+R    +V+ +P++          F GYK GM HV+       S   
Sbjct: 7   PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62

Query: 228 KKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXX 407
            +E   A T+IE PP+  V V  Y +TP+G + L  VWA+ + +D  R F          
Sbjct: 63  GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112

Query: 408 XXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587
                    +D+   +   K  +++    S VRV+A TQ +L    +KK  ++EI + GG
Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165

Query: 588 TIEDKVKWAREHLEKPIPV 644
             E  +  A E L K + +
Sbjct: 166 PPEKALSLALEKLGKDLTI 184


>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
           Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
           - Candidatus Nitrosopumilus maritimus SCM1
          Length = 331

 Score = 79.8 bits (188), Expect = 5e-14
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           M  RK  +PR GS+ + P+ R++    +++A+PK D  +P  + A  G+KAG   +V   
Sbjct: 1   MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF-Y 380
           DR       K++V   T++ TPP++ +G+ GY +   GL A   V+AE + +   +    
Sbjct: 60  DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISL 119

Query: 381 KNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAH 560
           KN                + E    + EK  KK+    ++V  I+ +   L    QKK +
Sbjct: 120 KN----------------KQENALDNAEKSLKKIKEIFAIV-AISPSAAGL---EQKKPY 159

Query: 561 IMEIQLNGGTIEDKVKWAREHLEKPIPVD 647
           I E  ++GG I  +    +E L K I +D
Sbjct: 160 IFEASVSGGDIPKQFAHVKELLGKEIKID 188


>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L3P -
           Uncultured methanogenic archaeon RC-I
          Length = 337

 Score = 73.7 bits (173), Expect = 3e-12
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
 Frame = +3

Query: 45  APRHGSMGFYPKKRSRRHRGKVKAFPK--DDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 218
           APR GS+G+ P+ R+R  + K++ + +  D P     +  F+G+KAGM+H+V   DRP S
Sbjct: 6   APRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHS 61

Query: 219 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVW 341
                EI   VTI+E P M   G+  Y ++P+G + +   W
Sbjct: 62  ATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAW 102


>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
           symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
           symbiosum
          Length = 328

 Score = 71.7 bits (168), Expect = 1e-11
 Identities = 37/113 (32%), Positives = 62/113 (54%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           M HRKFS PR GS+ + P+ R+R    +++ +P+    +P  L A  G+KAG   +V   
Sbjct: 1   MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSED 362
           DR  +    K++V   T++ TPP+  +G+ GY +  +G      V+AE +  +
Sbjct: 59  DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111


>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
           natans|Rep: Ribosomal protein L3 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 370

 Score = 68.5 bits (160), Expect = 1e-10
 Identities = 39/105 (37%), Positives = 56/105 (53%)
 Frame = +3

Query: 24  MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 203
           MSHRKF  PR GS+GF PKKRS R     K + +       +++ F   K   THV+R  
Sbjct: 1   MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60

Query: 204 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTV 338
           +   SK  +  I++ VT++E PP+  VG+  Y  +   L  L T+
Sbjct: 61  NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105


>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
           Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
           Nanoarchaeum equitans
          Length = 321

 Score = 66.9 bits (156), Expect = 4e-10
 Identities = 36/113 (31%), Positives = 61/113 (53%)
 Frame = +3

Query: 45  APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKI 224
           APR GSMGF+P+KR+ R   ++K +PK +  KP+   AF  YK GMTH +         I
Sbjct: 8   APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNI 57

Query: 225 NKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 383
           N + +   VT++E P ++ +G   Y +    L+ + +++   + +   R+  K
Sbjct: 58  NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK 110


>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 173

 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 40/108 (37%), Positives = 53/108 (49%)
 Frame = -2

Query: 650 RIDRDRFLQMFSGPFHFVLDGTTVKLDFHNVXXXXXXXXXXXXSVGNDSYNTTVADHLLE 471
           R++R+ F ++F GP +FV DGTTV LDF  V             V  DS N +V     +
Sbjct: 68  RVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDLGVSQDSDNRSVLLDSGQ 127

Query: 470 IFFY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQ 327
             F  F    +  F   F E  LL F+PV VE++S  F  +  PDS Q
Sbjct: 128 FSFNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFSPDSGQ 173


>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
           Thermoplasmatales|Rep: 50S ribosomal protein L3P -
           Thermoplasma volcanium
          Length = 331

 Score = 62.5 bits (145), Expect = 8e-09
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 51  RHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINK 230
           R GSM +YP+ R++    +++++P  + S PV +  F G+K GMTHV     R  S    
Sbjct: 8   RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65

Query: 231 KEIVEAVTIIETPPMVCVGVVGYIETPHG-LRALLTVWAEHMSED 362
           + I   VT+IE PP+  +G+  Y E   G +  +   W +++ ++
Sbjct: 66  QPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKE 110


>UniRef50_Q78TB4 Cluster: 16 days embryo head cDNA, RIKEN
           full-length enriched library, clone:C130041A08
           product:weakly similar to 60S RIBOSOMAL PROTEIN L3; n=1;
           Mus musculus|Rep: 16 days embryo head cDNA, RIKEN
           full-length enriched library, clone:C130041A08
           product:weakly similar to 60S RIBOSOMAL PROTEIN L3 - Mus
           musculus (Mouse)
          Length = 109

 Score = 39.9 bits (89), Expect = 0.052
 Identities = 20/46 (43%), Positives = 27/46 (58%)
 Frame = +3

Query: 96  HRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 233
           HR + K FPK+D  K  HL  F+  +A MT+ V E +R G K  +K
Sbjct: 8   HRIQAKDFPKEDLPKSAHLIVFLVSRAVMTYFVWEINRSGPKWTRK 53


>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
           OJ1742_G01.32; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
          Length = 100

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 230 ERDRGGCHHHRDSSDGLCRCCWIH*DPSWTTRSVD 334
           E DRG CHH+   S GLCR C +   P+ T   V+
Sbjct: 36  EGDRGCCHHYLTGSPGLCRRCPLRAHPAATGFEVE 70


>UniRef50_Q1EYM9 Cluster: Purine catabolism PurC-like; n=2;
           Clostridiaceae|Rep: Purine catabolism PurC-like -
           Clostridium oremlandii OhILAs
          Length = 551

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = +3

Query: 495 SVVRVIAHTQMKLLKQRQKKAH--IMEIQLNGGTIEDKVKWAREHLEKPI 638
           SV + I + Q  LL QR +K H  +M + L GG+IED  +  RE+L  P+
Sbjct: 126 SVFKEIFNKQTSLL-QRLEKVHEQLMNVVLEGGSIEDIGRVTRENLRNPL 174


>UniRef50_Q54JS8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1205

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +3

Query: 81  KRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTH--VVREPDRPGSKINKKEIVEAVT 254
           K +++   K+K   +++  K  +  AFI   A  ++   +R  DR   ++N   I  + T
Sbjct: 19  KANKKKAAKLKKLEQNEALKGRNPKAFISQAAYASNRLTIRNLDREAKRVNLPVIDRSGT 78

Query: 255 IIETPPMVCVGVVG 296
            +ETPP V + VVG
Sbjct: 79  AVETPPYV-IAVVG 91


>UniRef50_UPI00015B6051 Cluster: PREDICTED: similar to
           ENSANGP00000006197; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000006197 - Nasonia
           vitripennis
          Length = 1307

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = -1

Query: 408 PSSCICTSFCRSDVDSLQTYAPPRQSTERVVHEGSQCIQQHRHKPSEESR 259
           PS+ I T    SD++ L     P QS+  V+ +GS+    HR K SEE R
Sbjct: 840 PSASINTKKYESDIEILSN---PSQSSIEVLDDGSKSTTPHRKKSSEERR 886


>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
           Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
           protein - Sulfurovum sp. (strain NBC37-1)
          Length = 135

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 432 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGG 587
           WQD    K I+KD+   + YC  +R+  H   +L   ++ K HI+  +   G
Sbjct: 29  WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79


>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 253

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 20/68 (29%), Positives = 37/68 (54%)
 Frame = +3

Query: 444 LGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREH 623
           L RKSIE +  + IR+ +V   I    +K++++++   +  E +L  GT + +   A   
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194

Query: 624 LEKPIPVD 647
            EKPI ++
Sbjct: 195 KEKPISLE 202


>UniRef50_Q9MAP1 Cluster: Putative F-box protein At1g33020; n=4;
           Arabidopsis thaliana|Rep: Putative F-box protein
           At1g33020 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 518

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 649 ESTGIGFSRCSLAHFTLSSMVPPLSWISIM*AFFCRCFNSFI 524
           E TG+  S+C  +H  +S  + PL W+SI+  F    + SF+
Sbjct: 474 EFTGVKTSKCDTSHLQVSCELSPLCWLSIL-LFLVMVYMSFM 514


>UniRef50_Q5Y974 Cluster: Structural polyprotein; n=13; Solenopsis
           invicta virus 1|Rep: Structural polyprotein - Solenopsis
           invicta virus 1
          Length = 1137

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -2

Query: 275 HRRSLDDGDSLHDLFLVDF*TGTVRFSNHVGHTGLITDKSSQMNRFARVV 126
           HRR +    ++ D+ LVD    T++    VG  GLITD +S ++  A  V
Sbjct: 475 HRRDVTAARAIADMILVDERDATMQVQAEVGGQGLITDIASTVSAVAGAV 524


>UniRef50_Q5C2N1 Cluster: SJCHGC03405 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03405 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 321

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 42  SAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFI 164
           SA  H + G+Y + + RR  G   AF K D      LTAF+
Sbjct: 225 SAQSHITSGYYQQMKYRRDDGSFSAFGKSDKHGSTWLTAFV 265


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,721,833
Number of Sequences: 1657284
Number of extensions: 14186632
Number of successful extensions: 35572
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35535
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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