Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_N09
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O75251 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 190 2e-47
UniRef50_Q9DC70 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 188 1e-46
UniRef50_A6R2Y3 Cluster: NADH-ubiquinone oxidoreductase 20 kDa s... 159 5e-38
UniRef50_O68853 Cluster: NADH-quinone oxidoreductase subunit B 1... 155 7e-37
UniRef50_O67334 Cluster: NADH-quinone oxidoreductase chain B; n=... 151 2e-35
UniRef50_P56897 Cluster: NADH-quinone oxidoreductase subunit B 2... 141 1e-32
UniRef50_A2ZXB2 Cluster: Putative uncharacterized protein; n=2; ... 140 3e-32
UniRef50_Q26783 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 138 8e-32
UniRef50_Q3ZXS0 Cluster: Proton-translocating NADH-quinone oxido... 135 1e-30
UniRef50_Q1IPE7 Cluster: NADH-quinone oxidoreductase, B subunit;... 135 1e-30
UniRef50_Q1IL91 Cluster: NADH-quinone oxidoreductase, B subunit;... 133 4e-30
UniRef50_Q8A0F5 Cluster: NADH dehydrogenase I, chain B; n=6; Bac... 132 5e-30
UniRef50_Q746S4 Cluster: NADH dehydrogenase I, B/C/D subunits; n... 131 2e-29
UniRef50_Q8KEC2 Cluster: NADH dehydrogenase I, 20 kDa subunit; n... 128 1e-28
UniRef50_Q608X8 Cluster: NADH dehydrogenase I, B subunit; n=7; B... 128 2e-28
UniRef50_A5UXK1 Cluster: NADH-quinone oxidoreductase, B subunit;... 127 3e-28
UniRef50_P65576 Cluster: NADH-quinone oxidoreductase subunit B; ... 123 4e-27
UniRef50_Q6MIR4 Cluster: NADH dehydrogenase I chain B; n=2; Delt... 122 1e-26
UniRef50_A5GIB4 Cluster: NAD(P)H-quinone oxidoreductase subunit ... 122 1e-26
UniRef50_Q1K3R2 Cluster: NADH-quinone oxidoreductase, B subunit;... 121 1e-26
UniRef50_P19050 Cluster: NAD(P)H-quinone oxidoreductase subunit ... 120 4e-26
UniRef50_Q44240 Cluster: NAD(P)H-quinone oxidoreductase subunit ... 119 5e-26
UniRef50_A3PKI1 Cluster: NADH-quinone oxidoreductase, B subunit;... 119 7e-26
UniRef50_Q9F2W1 Cluster: NADH dehydrogenase subunit NuoB2; n=5; ... 118 2e-25
UniRef50_Q2H7B9 Cluster: Putative uncharacterized protein; n=1; ... 117 3e-25
UniRef50_Q9I0K0 Cluster: NADH-quinone oxidoreductase subunit B; ... 117 3e-25
UniRef50_Q2S5J2 Cluster: NADH-quinone oxidoreductase chain b; n=... 116 4e-25
UniRef50_Q9P9G2 Cluster: F420H2 dehydrogenase subunit FpoB; n=6;... 116 4e-25
UniRef50_Q9HRM0 Cluster: NADH dehydrogenase/oxidoreductase; n=6;... 114 2e-24
UniRef50_Q67KN6 Cluster: NADH dehydrogenase I subunit B; n=5; Ba... 111 2e-23
UniRef50_A4J659 Cluster: NADH-quinone oxidoreductase, B subunit;... 108 1e-22
UniRef50_Q8F7Q0 Cluster: NADH dehydrogenase I chain B; n=7; Bact... 106 4e-22
UniRef50_A0RY66 Cluster: NADH-ubiquinone oxidoreductase, subunit... 105 1e-21
UniRef50_A7H9V3 Cluster: NADH-quinone oxidoreductase, B subunit;... 102 9e-21
UniRef50_Q8ZU66 Cluster: NADH-ubiquinone oxidoreductase subunit;... 102 9e-21
UniRef50_A3H7K7 Cluster: NADH-quinone oxidoreductase, B subunit;... 96 8e-19
UniRef50_Q4J8C7 Cluster: NADH:ubiquinone oxidoreductase, B subun... 94 2e-18
UniRef50_UPI00015BB165 Cluster: NADH-quinone oxidoreductase, B s... 94 3e-18
UniRef50_A0L9R6 Cluster: NADH-quinone oxidoreductase, B subunit;... 93 7e-18
UniRef50_Q9YC23 Cluster: NuoB homolog; n=1; Aeropyrum pernix|Rep... 87 3e-16
UniRef50_O28446 Cluster: F420H2:quinone oxidoreductase, 39.7 kDa... 86 8e-16
UniRef50_Q9V0S7 Cluster: NuoB NADH dehydrogenase I, subunit B; n... 83 8e-15
UniRef50_A6Q8J4 Cluster: NADH-quinone oxidoreductase, chain B; n... 79 7e-14
UniRef50_A6DBV2 Cluster: NADH:ubiquinone oxidoreductase 20 kD su... 79 1e-13
UniRef50_A2YHL1 Cluster: Putative uncharacterized protein; n=2; ... 78 2e-13
UniRef50_Q609U0 Cluster: Hydrogenase subunit; n=2; Proteobacteri... 75 2e-12
UniRef50_A1ALK4 Cluster: NADH-quinone oxidoreductase, B subunit;... 74 3e-12
UniRef50_Q89GK1 Cluster: HycG protein; n=14; Proteobacteria|Rep:... 74 3e-12
UniRef50_A5FPI3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 74 3e-12
UniRef50_Q9X0U1 Cluster: NADH dehydrogenase, putative; n=4; Ther... 73 6e-12
UniRef50_A4YGN5 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 73 8e-12
UniRef50_Q57936 Cluster: Uncharacterized protein MJ0516; n=15; E... 73 8e-12
UniRef50_A3DKH2 Cluster: NADH-quinone oxidoreductase, B subunit;... 72 1e-11
UniRef50_Q8PY02 Cluster: Formate hydrogenlyase subunit 7; n=3; M... 70 4e-11
UniRef50_Q978D5 Cluster: Formate hydrogenlyase subunit 2; n=2; T... 70 6e-11
UniRef50_Q0W3I3 Cluster: Ech hydrogenase, subunit C; n=6; cellul... 69 1e-10
UniRef50_Q58758 Cluster: Uncharacterized protein MJ1363; n=9; Eu... 69 1e-10
UniRef50_Q9V0R6 Cluster: NADH ubiquinone oxidoreductase subunit;... 69 1e-10
UniRef50_A6Q6W5 Cluster: Ni-Fe hydrogenase, small subunit HycG; ... 68 2e-10
UniRef50_A1ASR2 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 68 2e-10
UniRef50_Q21TB3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 67 3e-10
UniRef50_A5FW47 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 66 7e-10
UniRef50_Q0W2C0 Cluster: Hydrogenase, small subunit-like protein... 65 1e-09
UniRef50_A1RWL1 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 65 1e-09
UniRef50_A7CX02 Cluster: NADH ubiquinone oxidoreductase 20 kDa s... 64 2e-09
UniRef50_A5FR05 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 64 2e-09
UniRef50_A0UXP2 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 64 4e-09
UniRef50_A3DM92 Cluster: NADH-quinone oxidoreductase, B subunit;... 64 4e-09
UniRef50_Q7M874 Cluster: HYDROGENASE-Ni,Fe-hydrogenase III small... 63 5e-09
UniRef50_Q12F15 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 63 5e-09
UniRef50_Q9UYN6 Cluster: Hydrogenase 4, component I or formate h... 63 5e-09
UniRef50_A7HGW9 Cluster: NADH ubiquinone oxidoreductase 20 kDa s... 62 9e-09
UniRef50_A6DB47 Cluster: HYDROGENASE-Ni,Fe-hydrogenase III small... 61 2e-08
UniRef50_P72317 Cluster: CooL; n=8; Bacteria|Rep: CooL - Rhodosp... 61 3e-08
UniRef50_A1SQ82 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 61 3e-08
UniRef50_Q0W6T1 Cluster: [NiFe]-hydrogenase, small subunit; n=1;... 60 5e-08
UniRef50_P16433 Cluster: Formate hydrogenlyase subunit 7; n=57; ... 60 5e-08
UniRef50_Q24ST9 Cluster: Formate hydrogenlyase subunit 7; n=2; D... 59 1e-07
UniRef50_A7BSF1 Cluster: NADH-plastoquinone oxidoreductase subun... 58 1e-07
UniRef50_Q6L0U2 Cluster: Formate hydrogenlyase subunit 7; n=3; c... 58 1e-07
UniRef50_Q7WT80 Cluster: EchC; n=2; Deltaproteobacteria|Rep: Ech... 56 1e-06
UniRef50_UPI00015BC86C Cluster: UPI00015BC86C related cluster; n... 54 3e-06
UniRef50_A0LSU0 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 53 7e-06
UniRef50_A2XI26 Cluster: Putative uncharacterized protein; n=3; ... 53 7e-06
UniRef50_A3ETD3 Cluster: Ni,Fe-hydrogenase III small subunit; n=... 50 6e-05
UniRef50_Q0BPG7 Cluster: Formate hydrogenlyase subunit 7; n=1; G... 49 9e-05
UniRef50_A6DAC3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa ... 40 0.040
UniRef50_Q5FU78 Cluster: Putative uncharacterized protein; n=1; ... 40 0.053
UniRef50_A2DFR6 Cluster: Phosphoribulokinase / Uridine kinase fa... 38 0.16
UniRef50_UPI0000E81815 Cluster: PREDICTED: hypothetical protein;... 37 0.37
UniRef50_Q6A6I9 Cluster: NADH dehydrogenase subunit; n=1; Propio... 36 1.1
UniRef50_A7BS42 Cluster: Exoribonuclease II; n=1; Beggiatoa sp. ... 34 2.6
UniRef50_Q6MT46 Cluster: Tetrapyrrole methylas family protein; n... 34 3.5
UniRef50_A7S1C1 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.5
UniRef50_Q8EYD8 Cluster: Formate hydrogenlyase subunit 7; n=4; L... 33 6.0
UniRef50_Q2H944 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q8ZL73 Cluster: Putative cytoplasmic protein; n=10; cel... 33 8.0
UniRef50_Q61MI5 Cluster: Putative uncharacterized protein CBG084... 33 8.0
>UniRef50_O75251 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor; n=9;
Catarrhini|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor - Homo
sapiens (Human)
Length = 213
Score = 190 bits (464), Expect = 2e-47
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +2
Query: 350 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 529
S+ E VA+LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ
Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQ 116
Query: 530 SDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
SDVMIVAGTLTNKMAPALRKVYD MP+P +V+SMG CANGGG
Sbjct: 117 SDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGG 158
>UniRef50_Q9DC70 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor; n=117;
cellular organisms|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor - Mus
musculus (Mouse)
Length = 224
Score = 188 bits (458), Expect = 1e-46
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = +2
Query: 359 AEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDV 538
AE V +LDDL+NW R+ SLWPMTFGLACCAVEMMH+AAPRYDMDR+GVVFRASPRQ+DV
Sbjct: 71 AEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADV 130
Query: 539 MIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
MIVAGTLTNKMAPALRKVYD MP+P +V+SMG CANGGG
Sbjct: 131 MIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGG 169
>UniRef50_A6R2Y3 Cluster: NADH-ubiquinone oxidoreductase 20 kDa
subunit, mitochondrial; n=1; Ajellomyces capsulatus
NAm1|Rep: NADH-ubiquinone oxidoreductase 20 kDa subunit,
mitochondrial - Ajellomyces capsulatus NAm1
Length = 242
Score = 159 bits (386), Expect = 5e-38
Identities = 67/92 (72%), Positives = 78/92 (84%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
+D + NW R+GSLWP++ GLACC VEMM ++ PRYD DR G +FRASPRQSD++IVAGT+
Sbjct: 95 IDAVTNWARQGSLWPVSLGLACCGVEMMAVSMPRYDQDRLGTIFRASPRQSDLLIVAGTV 154
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
TNKMAPALR VYD MPDP WVISMG CANGGG
Sbjct: 155 TNKMAPALRLVYDQMPDPKWVISMGSCANGGG 186
>UniRef50_O68853 Cluster: NADH-quinone oxidoreductase subunit B 1;
n=215; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit B 1 - Rhizobium meliloti
(Sinorhizobium meliloti)
Length = 192
Score = 155 bits (377), Expect = 7e-37
Identities = 71/95 (74%), Positives = 79/95 (83%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 550
V D+L+NW R GSL MTFGLACCAVEMM ++ PRYD +R+G RASPRQSDVMIVA
Sbjct: 47 VTSTDELINWARTGSLMWMTFGLACCAVEMMQMSMPRYDAERFGFAPRASPRQSDVMIVA 106
Query: 551 GTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
GTLTNKMAPALRKVYD MP+P +VISMG CANGGG
Sbjct: 107 GTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGG 141
>UniRef50_O67334 Cluster: NADH-quinone oxidoreductase chain B; n=2;
Aquifex aeolicus|Rep: NADH-quinone oxidoreductase chain
B - Aquifex aeolicus
Length = 179
Score = 151 bits (365), Expect = 2e-35
Identities = 63/103 (61%), Positives = 80/103 (77%)
Frame = +2
Query: 347 ASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPR 526
A N +++LL WGR+ SLWP+T GLACCA+EMMH AA R+D+DR GV+FRASPR
Sbjct: 3 AINSNGFVTTTVEELLRWGRRNSLWPVTIGLACCAIEMMHTAASRFDLDRLGVIFRASPR 62
Query: 527 QSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
Q+DV+IVAGT+ NK+AP L+ ++D MPDP W ISMG CA+ GG
Sbjct: 63 QADVLIVAGTVVNKVAPMLKLIWDQMPDPKWCISMGGCASAGG 105
>UniRef50_P56897 Cluster: NADH-quinone oxidoreductase subunit B 2;
n=43; cellular organisms|Rep: NADH-quinone
oxidoreductase subunit B 2 - Rhizobium meliloti
(Sinorhizobium meliloti)
Length = 167
Score = 141 bits (342), Expect = 1e-32
Identities = 56/91 (61%), Positives = 73/91 (80%)
Frame = +2
Query: 383 DDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLT 562
D +++W R+ +LWP TFG+ACCA+EM+ RYD+DR+GVVFR SPRQSDVMI+AGT+T
Sbjct: 18 DSIISWSRRSALWPETFGIACCAIEMISAGCARYDLDRFGVVFRPSPRQSDVMIIAGTVT 77
Query: 563 NKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
K AP +R++YD MP+P WVI+MG CA GG
Sbjct: 78 RKFAPVVRRLYDQMPEPRWVIAMGTCAISGG 108
>UniRef50_A2ZXB2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 149
Score = 140 bits (339), Expect = 3e-32
Identities = 60/80 (75%), Positives = 69/80 (86%)
Frame = +2
Query: 350 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 529
S AE ++++DDL+NW R+GS+WPMTFGLACCAVEMMH A RYD DR+GV+FR SPRQ
Sbjct: 43 SKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGASRYDFDRFGVIFRPSPRQ 102
Query: 530 SDVMIVAGTLTNKMAPALRK 589
SD MIVAGTLTNKMAPALRK
Sbjct: 103 SDCMIVAGTLTNKMAPALRK 122
>UniRef50_Q26783 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor; n=6;
Trypanosomatidae|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 7, mitochondrial precursor -
Trypanosoma brucei brucei
Length = 202
Score = 138 bits (335), Expect = 8e-32
Identities = 61/102 (59%), Positives = 76/102 (74%)
Frame = +2
Query: 350 SNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQ 529
+N + A L DL W S WP+TFGLACCAVEMMH A RYD+DR+G+V R +PRQ
Sbjct: 46 NNALQYAQMTLHDLTEWCLAYSPWPLTFGLACCAVEMMHAYASRYDLDRFGIVPRPTPRQ 105
Query: 530 SDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
++++IV+GT+TNKMAP LR +Y M +P WVISMG CANGGG
Sbjct: 106 AEIIIVSGTVTNKMAPILRNIYVQMVNPKWVISMGSCANGGG 147
>UniRef50_Q3ZXS0 Cluster: Proton-translocating NADH-quinone
oxidoreductase, B subunit; n=3; Dehalococcoides|Rep:
Proton-translocating NADH-quinone oxidoreductase, B
subunit - Dehalococcoides sp. (strain CBDB1)
Length = 200
Score = 135 bits (326), Expect = 1e-30
Identities = 57/96 (59%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIV 547
+ ++ +LNW R SLWP+ FGLACCA+EMM +AA R+D+ R+G+ +FRASPRQ+D+MIV
Sbjct: 54 ITSVEKVLNWSRHYSLWPVMFGLACCAIEMMCMAASRWDLARFGMDIFRASPRQADLMIV 113
Query: 548 AGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
AGTLT KMAP L+++YD MP+P WV++MG C GG
Sbjct: 114 AGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGG 149
>UniRef50_Q1IPE7 Cluster: NADH-quinone oxidoreductase, B subunit;
n=7; Bacteria|Rep: NADH-quinone oxidoreductase, B
subunit - Acidobacteria bacterium (strain Ellin345)
Length = 213
Score = 135 bits (326), Expect = 1e-30
Identities = 58/98 (59%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Frame = +2
Query: 365 MAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVM 541
+ + LD+ +NW RK S+WPMTFGLACCA+EMM + A R+D+ R+G VFR SPRQSD+M
Sbjct: 56 IVLTTLDNAVNWIRKNSIWPMTFGLACCAIEMMSMGASRFDIARFGAEVFRPSPRQSDLM 115
Query: 542 IVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
I+AG ++ KMAP +R +Y MP+P WVISMG CA GG
Sbjct: 116 IIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGG 153
>UniRef50_Q1IL91 Cluster: NADH-quinone oxidoreductase, B subunit;
n=2; Acidobacteria|Rep: NADH-quinone oxidoreductase, B
subunit - Acidobacteria bacterium (strain Ellin345)
Length = 202
Score = 133 bits (321), Expect = 4e-30
Identities = 56/96 (58%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIV 547
++ +D + NW RK S+WPMTFGLACCA+EM+ + RYD+ R+G VFR SPRQSD+MIV
Sbjct: 14 LSSVDYVFNWARKSSVWPMTFGLACCAIEMITASTARYDIARFGSEVFRPSPRQSDLMIV 73
Query: 548 AGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
AGT+T KMAP ++++Y+ MP+P WV++MG CA+ GG
Sbjct: 74 AGTVTLKMAPVVQRIYEQMPEPKWVMAMGACASVGG 109
>UniRef50_Q8A0F5 Cluster: NADH dehydrogenase I, chain B; n=6;
Bacteroides|Rep: NADH dehydrogenase I, chain B -
Bacteroides thetaiotaomicron
Length = 197
Score = 132 bits (320), Expect = 5e-30
Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 359 AEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSD 535
A + + LDDL+NWGR SLWP+TF +CC +E M + A RYDM R+G V RASPRQ+D
Sbjct: 35 ANVFLGVLDDLVNWGRSNSLWPLTFATSCCGIEFMALGAARYDMARFGFEVARASPRQAD 94
Query: 536 VMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+++V GT+TNKMAP L+++YD MPDP +V+++G CA GG
Sbjct: 95 MIMVCGTITNKMAPVLKRLYDQMPDPKYVVAVGGCAVSGG 134
>UniRef50_Q746S4 Cluster: NADH dehydrogenase I, B/C/D subunits;
n=32; Proteobacteria|Rep: NADH dehydrogenase I, B/C/D
subunits - Geobacter sulfurreducens
Length = 792
Score = 131 bits (316), Expect = 2e-29
Identities = 55/96 (57%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIV 547
+A LDDL+NWGR SLWPM FGL+CC VEMM RYD+ R+G V R +PR++D+M++
Sbjct: 13 LASLDDLINWGRANSLWPMFFGLSCCFVEMMTSFTSRYDVSRFGAEVLRGTPREADLMVI 72
Query: 548 AGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
AGT+ KMAP++ ++Y+ M +P WVISMG CAN GG
Sbjct: 73 AGTVFKKMAPSILRLYEQMAEPKWVISMGSCANSGG 108
>UniRef50_Q8KEC2 Cluster: NADH dehydrogenase I, 20 kDa subunit;
n=26; Bacteria|Rep: NADH dehydrogenase I, 20 kDa subunit
- Chlorobium tepidum
Length = 189
Score = 128 bits (309), Expect = 1e-28
Identities = 54/95 (56%), Positives = 73/95 (76%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 550
V +D+++NW R SLWPM FGLACCA+EMM A YD++R+G+ R+SPRQSD+MIVA
Sbjct: 15 VTSVDNVMNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGIFPRSSPRQSDLMIVA 74
Query: 551 GTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
GT+T KMA + +Y+ MP+P +V+SMG C+N GG
Sbjct: 75 GTVTMKMAERVVTLYEQMPEPRYVLSMGSCSNSGG 109
>UniRef50_Q608X8 Cluster: NADH dehydrogenase I, B subunit; n=7;
Bacteria|Rep: NADH dehydrogenase I, B subunit -
Methylococcus capsulatus
Length = 213
Score = 128 bits (308), Expect = 2e-28
Identities = 60/128 (46%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Frame = +2
Query: 275 SQIRDTHLPAPNPTEKRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAV 454
S R PAP P + +++A + ARLDDL+ WGRK S+WP FGL+CC V
Sbjct: 4 SLTRADQTPAPKPGGQT----YEEALRR-NILFARLDDLVRWGRKNSIWPFNFGLSCCYV 58
Query: 455 EMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISM 631
EM R+D+ R+G V RASPRQ+D+M+++GT+ KMAP ++ +YD + +P W+ISM
Sbjct: 59 EMATAFTSRFDIARFGSEVIRASPRQADLMVISGTVFRKMAPVVKHLYDQLLEPKWIISM 118
Query: 632 GXCANGGG 655
G CAN GG
Sbjct: 119 GSCANSGG 126
>UniRef50_A5UXK1 Cluster: NADH-quinone oxidoreductase, B subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, B subunit - Roseiflexus sp. RS-1
Length = 268
Score = 127 bits (306), Expect = 3e-28
Identities = 53/88 (60%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +2
Query: 395 NWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVAGTLTNKM 571
NWGR+ S+WP++FGLACCA+EMM R+D+ R+G +FRASPRQ+D+MIVAGT+T KM
Sbjct: 26 NWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRASPRQADLMIVAGTVTKKM 85
Query: 572 APALRKVYDXMPDPXWVISMGXCANGGG 655
AP + ++Y+ MP+P +VISMG CA GG
Sbjct: 86 APQVVRLYNQMPEPRYVISMGACATSGG 113
>UniRef50_P65576 Cluster: NADH-quinone oxidoreductase subunit B;
n=45; Bacteria|Rep: NADH-quinone oxidoreductase subunit
B - Mycobacterium bovis
Length = 184
Score = 123 bits (296), Expect = 4e-27
Identities = 52/96 (54%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Frame = +2
Query: 371 VARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVV-FRASPRQSDVMIV 547
++ ++ + + RK SLWP TFGLACCA+EMM A PR+D+ R+G+ F A+PRQ+D+MIV
Sbjct: 13 LSTVEKVAGYVRKNSLWPATFGLACCAIEMMATAGPRFDIARFGMERFSATPRQADLMIV 72
Query: 548 AGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
AG ++ KMAP LR++YD M +P WV++MG CA+ GG
Sbjct: 73 AGRVSQKMAPVLRQIYDQMAEPKWVLAMGVCASSGG 108
>UniRef50_Q6MIR4 Cluster: NADH dehydrogenase I chain B; n=2;
Deltaproteobacteria|Rep: NADH dehydrogenase I chain B -
Bdellovibrio bacteriovorus
Length = 187
Score = 122 bits (293), Expect = 1e-26
Identities = 49/95 (51%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +2
Query: 374 ARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVA 550
++LD ++ WGRK SLWPM +G ACC +E M + P+YD+ R+G V R SPRQ+D+++VA
Sbjct: 32 SKLDAIVAWGRKNSLWPMPYGTACCGIEFMSVMGPKYDLARFGAEVARFSPRQADLLVVA 91
Query: 551 GTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
GT+T KMAP + ++Y M +P +V+SMG CA+ GG
Sbjct: 92 GTITEKMAPVIVRIYQQMLEPKYVLSMGACASSGG 126
>UniRef50_A5GIB4 Cluster: NAD(P)H-quinone oxidoreductase subunit K;
n=10; cellular organisms|Rep: NAD(P)H-quinone
oxidoreductase subunit K - Synechococcus sp. (strain
WH7803)
Length = 248
Score = 122 bits (293), Expect = 1e-26
Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Frame = +2
Query: 263 TPVVSQIRDTHLPAPNPTEKRPYSPFQDASNMAEMAV-ARLDDLLNWGRKGSLWPMTFGL 439
+P + +RD + P +++E + LDDL NW R SLWP+ +G
Sbjct: 5 SPSIQALRDLREASCGPVAGAADGAPTVTQDLSENVILTSLDDLHNWARLSSLWPLLYGT 64
Query: 440 ACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXW 619
ACC +E + R+D DR+G+V R+SPRQ+D++IVAGT+T KMAPAL ++Y+ MP+P +
Sbjct: 65 ACCFIEFAALLGSRFDFDRFGLVPRSSPRQADLLIVAGTVTMKMAPALVRLYEQMPEPKY 124
Query: 620 VISMGXCANGGG 655
VI+MG C GG
Sbjct: 125 VIAMGACTITGG 136
>UniRef50_Q1K3R2 Cluster: NADH-quinone oxidoreductase, B subunit;
n=1; Desulfuromonas acetoxidans DSM 684|Rep:
NADH-quinone oxidoreductase, B subunit - Desulfuromonas
acetoxidans DSM 684
Length = 196
Score = 121 bits (292), Expect = 1e-26
Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
Frame = +2
Query: 344 DASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRAS 520
D M ++ +A D +LN R SLWPMTFGLACCA+EMM R+D+ RYG VFR S
Sbjct: 33 DPGAMVQLELA--DKILNLCRANSLWPMTFGLACCAIEMMCSGMARFDISRYGAEVFRPS 90
Query: 521 PRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
PRQSD+MIVAGT+ KMAPA+ +Y+ MP P +VI++G CA GG
Sbjct: 91 PRQSDLMIVAGTVNKKMAPAVVTLYEQMPAPRYVIALGNCAISGG 135
>UniRef50_P19050 Cluster: NAD(P)H-quinone oxidoreductase subunit K
(EC 1.6.5.-) (NAD(P)H dehydrogenase I, subunit K); n=16;
cellular organisms|Rep: NAD(P)H-quinone oxidoreductase
subunit K (EC 1.6.5.-) (NAD(P)H dehydrogenase I, subunit
K) - Synechocystis sp. (strain PCC 6803)
Length = 248
Score = 120 bits (288), Expect = 4e-26
Identities = 52/111 (46%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Frame = +2
Query: 326 PYSPFQDASNMAEMAV-ARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYG 502
P S Q +++E + +DDL NW + SLWP+ +G ACC +E + R+D DR+G
Sbjct: 22 PASRSQVTQDLSENVILTTVDDLYNWAKLSSLWPLLYGTACCFIEFAALIGSRFDFDRFG 81
Query: 503 VVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+V R+SPRQ+D++I AGT+T KMAPAL ++Y+ MP+P +VI+MG C GG
Sbjct: 82 LVPRSSPRQADLIITAGTITMKMAPALVRLYEEMPEPKYVIAMGACTITGG 132
>UniRef50_Q44240 Cluster: NAD(P)H-quinone oxidoreductase subunit K
(EC 1.6.5.-) (NAD(P)H dehydrogenase I, subunit K); n=65;
cellular organisms|Rep: NAD(P)H-quinone oxidoreductase
subunit K (EC 1.6.5.-) (NAD(P)H dehydrogenase I, subunit
K) - Anabaena sp. (strain PCC 7120)
Length = 245
Score = 119 bits (287), Expect = 5e-26
Identities = 54/116 (46%), Positives = 77/116 (66%)
Frame = +2
Query: 308 NPTEKRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYD 487
NP E+ + QD S + + +DDL NW R SLWP+ FG ACC +E + R+D
Sbjct: 17 NPIERPTIT--QDLSE--NVILTTVDDLYNWARLSSLWPLLFGTACCFIEFAALIGSRFD 72
Query: 488 MDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
DR+G++ R+SPRQ+D++I AGT+T KMAP L ++Y+ MP+P +VI+MG C GG
Sbjct: 73 FDRFGLIPRSSPRQADLIITAGTITMKMAPQLVRLYEQMPEPKYVIAMGACTITGG 128
>UniRef50_A3PKI1 Cluster: NADH-quinone oxidoreductase, B subunit;
n=5; Proteobacteria|Rep: NADH-quinone oxidoreductase, B
subunit - Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9)
Length = 205
Score = 119 bits (286), Expect = 7e-26
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Frame = +2
Query: 323 RPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYG 502
RP + + A RLDDL+ W RK SLWP FGL+CC VEM P YD R+G
Sbjct: 7 RPDAEAPEDRMAASHLFTRLDDLVAWSRKHSLWPFNFGLSCCYVEMATALTPVYDQARFG 66
Query: 503 V-VFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
V R++PRQ+D++IV+GT+ KMA L ++Y M +P WVISMG CAN GG
Sbjct: 67 AEVIRSTPRQADLLIVSGTVFRKMAVPLYRLYSQMREPRWVISMGACANSGG 118
>UniRef50_Q9F2W1 Cluster: NADH dehydrogenase subunit NuoB2; n=5;
Actinomycetales|Rep: NADH dehydrogenase subunit NuoB2 -
Streptomyces coelicolor
Length = 232
Score = 118 bits (283), Expect = 2e-25
Identities = 55/120 (45%), Positives = 79/120 (65%), Gaps = 1/120 (0%)
Frame = +2
Query: 299 PAPNPTEKRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAP 478
P P P KR +A +A + +LNWGR+ SLW FGLACCA+E + +
Sbjct: 11 PVPLPEPKR-------LGTLARLAPEPMKVVLNWGRRYSLWVFNFGLACCAIEFIAASMA 63
Query: 479 RYDMDRYGVV-FRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
R+D R GV+ F PRQ+D+M+V+GT+T+KMAPA++++Y+ MP+P +VIS G C+N GG
Sbjct: 64 RHDFIRLGVIPFAPGPRQADLMVVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGG 123
>UniRef50_Q2H7B9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 189
Score = 117 bits (281), Expect = 3e-25
Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = +2
Query: 263 TPVVSQIRDTHLPAP-NPTEKRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGL 439
T S R +P P PT S + +++ E A++ LD L+NW R+GSLWPM+FGL
Sbjct: 48 TEQTSPARQPRIPPPVRPT--LAVSTEKRPNSVTEYALSTLDGLINWARQGSLWPMSFGL 105
Query: 440 ACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAG 553
ACCA+EMMH++ PRYD DR G++FRASPRQSDVMIVAG
Sbjct: 106 ACCAIEMMHLSMPRYDNDRQGIIFRASPRQSDVMIVAG 143
>UniRef50_Q9I0K0 Cluster: NADH-quinone oxidoreductase subunit B;
n=78; Bacteria|Rep: NADH-quinone oxidoreductase subunit
B - Pseudomonas aeruginosa
Length = 225
Score = 117 bits (281), Expect = 3e-25
Identities = 51/93 (54%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVAGT 556
L+ +NWGRK SLWP FGL+CC VEM +D+ R+G V RASPRQ+D M++AGT
Sbjct: 47 LNSTVNWGRKNSLWPYNFGLSCCYVEMTTAFTAPHDIARFGAEVIRASPRQADFMVIAGT 106
Query: 557 LTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
KMAP ++++Y+ M +P WVISMG CAN GG
Sbjct: 107 CFIKMAPVIQRLYEQMLEPKWVISMGSCANSGG 139
>UniRef50_Q2S5J2 Cluster: NADH-quinone oxidoreductase chain b; n=3;
Bacteria|Rep: NADH-quinone oxidoreductase chain b -
Salinibacter ruber (strain DSM 13855)
Length = 213
Score = 116 bits (280), Expect = 4e-25
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +2
Query: 377 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVAG 553
R+D LNW R SL PM GLACCA+EMM A P+YD R+G R SPRQ+D+MIVAG
Sbjct: 16 RVDTFLNWARSNSLMPMPMGLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQADLMIVAG 75
Query: 554 TLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ KM+ A+R+V+D M DP W I+MG CA+ GG
Sbjct: 76 WCSYKMSHAIRRVWDQMGDPKWCIAMGACASTGG 109
>UniRef50_Q9P9G2 Cluster: F420H2 dehydrogenase subunit FpoB; n=6;
Archaea|Rep: F420H2 dehydrogenase subunit FpoB -
Methanosarcina mazei (Methanosarcina frisia)
Length = 184
Score = 116 bits (280), Expect = 4e-25
Identities = 48/93 (51%), Positives = 65/93 (69%)
Frame = +2
Query: 377 RLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 556
+ D++NWGRK SLW MT + CC VEM+ YD DR+G++ R SPR +DVMI++G
Sbjct: 39 KAQDIINWGRKNSLWFMTQPMGCCGVEMIATGCAHYDTDRFGIIPRNSPRHADVMIISGY 98
Query: 557 LTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+T K PAL++++D MP P WVI+MG CA GG
Sbjct: 99 VTKKYLPALKRLWDQMPAPKWVIAMGDCAISGG 131
>UniRef50_Q9HRM0 Cluster: NADH dehydrogenase/oxidoreductase; n=6;
Halobacteriaceae|Rep: NADH dehydrogenase/oxidoreductase
- Halobacterium salinarium (Halobacterium halobium)
Length = 235
Score = 114 bits (274), Expect = 2e-24
Identities = 48/109 (44%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
Frame = +2
Query: 332 SPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-V 508
S ++A + + D +NW R S++ + FG+ACC++EMMH + ++D+DR+ V
Sbjct: 35 SRLREAFGSTPFILTKFDKFMNWVRGSSMFMLQFGIACCSIEMMHTYSVKHDLDRFHAGV 94
Query: 509 FRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
RASPRQ+DVMIV GT+ +K AP +++VYD MP+P +V++MG C+ GG
Sbjct: 95 PRASPRQADVMIVPGTIVSKFAPRMKRVYDQMPEPKFVVNMGNCSTSGG 143
>UniRef50_Q67KN6 Cluster: NADH dehydrogenase I subunit B; n=5;
Bacteria|Rep: NADH dehydrogenase I subunit B -
Symbiobacterium thermophilum
Length = 182
Score = 111 bits (266), Expect = 2e-23
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = +2
Query: 389 LLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQSDVMIVAGTLTN 565
+L WG S WP+ FG+ACCA+EMM + +YD+ R+G R SPRQ+DVMIVAGT+
Sbjct: 39 VLGWGYGNSTWPLGFGIACCAIEMMAACSSKYDIARFGSEAMRMSPRQADVMIVAGTVNE 98
Query: 566 KMAPALRKVYDXMPDPXWVISMGXCANGGG 655
KMA +R++YD M +P +VI+MG CA+ GG
Sbjct: 99 KMAVVVRRLYDQMSEPKFVIAMGACASNGG 128
>UniRef50_A4J659 Cluster: NADH-quinone oxidoreductase, B subunit;
n=1; Desulfotomaculum reducens MI-1|Rep: NADH-quinone
oxidoreductase, B subunit - Desulfotomaculum reducens
MI-1
Length = 196
Score = 108 bits (260), Expect = 1e-22
Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Frame = +2
Query: 365 MAVARLDDLLNWGRKGSLWPMTFGLACCAVE-MMHIAAPRYDMDRYGV-VFRASPRQSDV 538
++V L+ LLN R SLWPM FGLACCA+E +M R+D+ R+G V RASPRQ+DV
Sbjct: 43 VSVGPLEKLLNLARANSLWPMGFGLACCAIEGLMAANMARFDLARFGYEVMRASPRQADV 102
Query: 539 MIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
M+V GT+T K AP + ++Y+ M +P +VI+MG CA GG
Sbjct: 103 MLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAISGG 141
>UniRef50_Q8F7Q0 Cluster: NADH dehydrogenase I chain B; n=7;
Bacteria|Rep: NADH dehydrogenase I chain B - Leptospira
interrogans
Length = 186
Score = 106 bits (255), Expect = 4e-22
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = +2
Query: 332 SPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVF 511
+P Q +M ++ ++ ++ WGR SLWP F ACC +E M A YD+ R+G
Sbjct: 9 TPGQALGDMVQLG--NVESVIQWGRSYSLWPYPFATACCGIEYMSTACSDYDIARFGAER 66
Query: 512 RA-SPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ SPRQ+D+++V GT+T KMAP LR++YD M +P +VIS+G CA+ GG
Sbjct: 67 PSFSPRQADMILVLGTITYKMAPVLRQIYDQMAEPKFVISVGACASSGG 115
>UniRef50_A0RY66 Cluster: NADH-ubiquinone oxidoreductase, subunit B;
n=2; Thermoprotei|Rep: NADH-ubiquinone oxidoreductase,
subunit B - Cenarchaeum symbiosum
Length = 160
Score = 105 bits (251), Expect = 1e-21
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +2
Query: 392 LNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFR-ASPRQSDVMIVAGTLTNK 568
+NWGR SLWP+ ACC+VE + P+YD++R+G++ S RQ D+++V GT+T K
Sbjct: 20 INWGRIWSLWPVHIETACCSVEFGAASGPKYDVERFGIIEAFGSLRQCDLIVVQGTITRK 79
Query: 569 MAPALRKVYDXMPDPXWVISMGXCANGGG 655
MAP LR VYD MP+P +VI+MG CA GG
Sbjct: 80 MAPRLRLVYDQMPEPKYVIAMGACAITGG 108
>UniRef50_A7H9V3 Cluster: NADH-quinone oxidoreductase, B subunit;
n=5; Bacteria|Rep: NADH-quinone oxidoreductase, B
subunit - Anaeromyxobacter sp. Fw109-5
Length = 183
Score = 102 bits (244), Expect = 9e-21
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +2
Query: 392 LNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVF-RASPRQSDVMIVAGTLTNK 568
L W RK SL+ F ACC +E M +A+ RYD+DR+G R SPRQ+D++IV GT+ K
Sbjct: 30 LGWARKYSLFQYPFVTACCGMEFMTVASARYDLDRFGAALPRFSPRQADLLIVVGTVNCK 89
Query: 569 MAPALRKVYDXMPDPXWVISMGXCANGGG 655
AP LR+VY+ + +P WV++ G CA+ GG
Sbjct: 90 QAPILRRVYEQIAEPKWVVAFGVCASSGG 118
>UniRef50_Q8ZU66 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=5; Pyrobaculum|Rep: NADH-ubiquinone oxidoreductase
subunit - Pyrobaculum aerophilum
Length = 190
Score = 102 bits (244), Expect = 9e-21
Identities = 44/97 (45%), Positives = 68/97 (70%)
Frame = +2
Query: 365 MAVARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMI 544
M A+L+ + WG + SLWP+ +CC VE+ H +AP +D +R+GV+ + RQ++V+I
Sbjct: 10 MKKAKLERVFKWGVRWSLWPVHLVTSCCGVEVAHTSAPGFDAERWGVLPFNTMRQTNVII 69
Query: 545 VAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
V GT+T KMA L++VY+ MP+P +V++MG CA GG
Sbjct: 70 VEGTITRKMAKVLKQVYEQMPEPKFVLAMGACAVRGG 106
>UniRef50_A3H7K7 Cluster: NADH-quinone oxidoreductase, B subunit;
n=4; Thermoproteaceae|Rep: NADH-quinone oxidoreductase,
B subunit - Caldivirga maquilingensis IC-167
Length = 374
Score = 95.9 bits (228), Expect = 8e-19
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = +2
Query: 383 DDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLT 562
D L +WG K S+WP ACC VE H +AP YD +R+G + PRQ++ +++ GT+T
Sbjct: 25 DSLASWGTKFSIWPAHLVTACCGVEFAHASAPGYDAERWGFLPIFGPRQTNSIVIEGTVT 84
Query: 563 NKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
KMA ++ Y+ MP P +VI+MG CA GG
Sbjct: 85 RKMARIVKTAYEQMPYPKFVIAMGSCAMEGG 115
>UniRef50_Q4J8C7 Cluster: NADH:ubiquinone oxidoreductase, B subunit;
n=6; Thermoprotei|Rep: NADH:ubiquinone oxidoreductase, B
subunit - Sulfolobus acidocaldarius
Length = 171
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
+ L +WG SLWP +CC E AA R+D +RYGV+ +S RQ++++++ GTL
Sbjct: 28 IKSLKDWGTSFSLWPPHLTTSCCGTEFGAFAAARFDAERYGVLPFSSARQTNLLVIEGTL 87
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
T KM A + VYD MP+P +VI+MG CA GG
Sbjct: 88 TRKMGRAAKIVYDQMPEPKFVIAMGACALEGG 119
>UniRef50_UPI00015BB165 Cluster: NADH-quinone oxidoreductase, B
subunit; n=1; Ignicoccus hospitalis KIN4/I|Rep:
NADH-quinone oxidoreductase, B subunit - Ignicoccus
hospitalis KIN4/I
Length = 207
Score = 93.9 bits (223), Expect = 3e-18
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = +2
Query: 374 ARLDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAG 553
A + + L W R+ SLW + G+ CCA+EMM A +D +R GV+ RA+PRQ DV+++ G
Sbjct: 18 APVKEALKWSRRNSLWLLHLGIMCCAIEMMQAAFAFHDFERLGVLARATPRQVDVILING 77
Query: 554 TLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ K+A LR+++ P P +VI MG CA GG
Sbjct: 78 PVNRKLAERLRRLFMQTPGPRFVIVMGECAINGG 111
>UniRef50_A0L9R6 Cluster: NADH-quinone oxidoreductase, B subunit;
n=1; Magnetococcus sp. MC-1|Rep: NADH-quinone
oxidoreductase, B subunit - Magnetococcus sp. (strain
MC-1)
Length = 213
Score = 92.7 bits (220), Expect = 7e-18
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
++DL NW R S+W + FG C A+EM + PR+D RYGV +RA+PRQS++ IV+G L
Sbjct: 43 VEDLFNWARSNSIWVLGFGTGCGAIEMRPLMTPRFDAYRYGVQWRATPRQSNLFIVSGYL 102
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ K + + Y+ M P +V+ +G C GG
Sbjct: 103 SVKTLKRVVRAYEQMQSPKYVMGLGSCTINGG 134
>UniRef50_Q9YC23 Cluster: NuoB homolog; n=1; Aeropyrum pernix|Rep:
NuoB homolog - Aeropyrum pernix
Length = 199
Score = 87.0 bits (206), Expect = 3e-16
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
LD +++W SLWP+ +CC+ E APR D +++G + PRQ++++I+ GT+
Sbjct: 31 LDKMVDWATSFSLWPVHLTTSCCSTEFAATFAPRIDGEQFGALPWVGPRQTNLIIIEGTV 90
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
T KMA A+R ++ MP P + I+MG CA GG
Sbjct: 91 TKKMACAVRLTWEQMPHPKFAIAMGACALDGG 122
>UniRef50_O28446 Cluster: F420H2:quinone oxidoreductase, 39.7 kDa
subunit, putative; n=4; Archaea|Rep: F420H2:quinone
oxidoreductase, 39.7 kDa subunit, putative -
Archaeoglobus fulgidus
Length = 353
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
L + WG K SLWP+ ACC E+ H A YD +R G + RQ++++IV G +
Sbjct: 16 LGPIKKWGTKWSLWPVHLVTACCGAELAHAFACGYDGERIGALNYGIARQTNLIIVEGAI 75
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
T KMA LR ++ MPDP +VI MG C GG
Sbjct: 76 TRKMAKVLRITWEQMPDPKFVIVMGACGLQGG 107
>UniRef50_Q9V0S7 Cluster: NuoB NADH dehydrogenase I, subunit B; n=4;
Thermococcaceae|Rep: NuoB NADH dehydrogenase I, subunit
B - Pyrococcus abyssi
Length = 195
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 356 MAEMAVARL-DDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQS 532
M EM RL + L NW RK SLW ++F C +EM + RYD++R+G++ SPRQ
Sbjct: 1 MREMVDWRLFEPLFNWARKKSLWIVSFCTGCGGIEMPPLMTSRYDIERFGMIPDPSPRQY 60
Query: 533 DVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
D+ ++ G +T K + Y+ PDP +V++ G C GG
Sbjct: 61 DLFLITGYVTPKTLKRIIITYELSPDPKYVLAHGSCPLNGG 101
>UniRef50_A6Q8J4 Cluster: NADH-quinone oxidoreductase, chain B; n=2;
Epsilonproteobacteria|Rep: NADH-quinone oxidoreductase,
chain B - Sulfurovum sp. (strain NBC37-1)
Length = 140
Score = 79.4 bits (187), Expect = 7e-14
Identities = 31/75 (41%), Positives = 50/75 (66%)
Frame = +2
Query: 431 FGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPD 610
F CC++EM PRYD +RYG + +PRQ+DV+++ G ++ K+ PAL + Y MP+
Sbjct: 4 FCTGCCSLEMAAAMGPRYDWERYGYMPTPTPRQADVLMITGLVSKKILPALLRTYAQMPE 63
Query: 611 PXWVISMGXCANGGG 655
P +V+++G C+ GG
Sbjct: 64 PKYVVALGACSFDGG 78
>UniRef50_A6DBV2 Cluster: NADH:ubiquinone oxidoreductase 20 kD
subunit and related Fe-S oxidoreductase; n=1;
Caminibacter mediatlanticus TB-2|Rep: NADH:ubiquinone
oxidoreductase 20 kD subunit and related Fe-S
oxidoreductase - Caminibacter mediatlanticus TB-2
Length = 164
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 404 RKGSLWPM---TFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMA 574
RK S W + T G C +E++ AP+YD++R+G + R +P+QSD+++V G +T
Sbjct: 8 RKKSPWILHYNTGGCNGCDIEILATLAPKYDIERFGALNRGNPKQSDILLVTGPVTMHCK 67
Query: 575 PALRKVYDXMPDPXWVISMGXCANGGG 655
LR++Y MP+P V++MG C +GGG
Sbjct: 68 DVLRRLYLEMPEPKVVVAMGACGHGGG 94
>UniRef50_A2YHL1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 135
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/51 (70%), Positives = 39/51 (76%)
Frame = +2
Query: 437 LACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRK 589
LA CAVEMMH A YD DR+ V+FR SPRQSD MI+ GTLTNKM PAL K
Sbjct: 58 LAYCAVEMMHAGASCYDFDRFRVIFRPSPRQSDCMIIVGTLTNKMGPALGK 108
>UniRef50_Q609U0 Cluster: Hydrogenase subunit; n=2;
Proteobacteria|Rep: Hydrogenase subunit - Methylococcus
capsulatus
Length = 169
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E+ + P YD++RYGV F ASPR +DV++V G ++ M AL+ ++ P+P WV+
Sbjct: 58 CELEIAALGNPFYDIERYGVHFVASPRHADVLMVTGPVSRHMQAALQATWEATPEPKWVV 117
Query: 626 SMGXCANGGG 655
++G CA GG
Sbjct: 118 AVGSCAADGG 127
>UniRef50_A1ALK4 Cluster: NADH-quinone oxidoreductase, B subunit;
n=2; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, B subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 164
Score = 74.1 bits (174), Expect = 3e-12
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGL-AC--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 550
+D ++NW R S W + + AC C +E++ P +D++R+G + +PR +DV++ +
Sbjct: 4 IDRIVNWARIKSPWVIHYNTGACNGCDIEIVATLTPVFDIERFGCQLKGTPRHADVLLCS 63
Query: 551 GTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
G +T + + ++Y+ MP+P +V+++G CA GG
Sbjct: 64 GPVTRQSRDRIIRIYEQMPEPKFVVAVGSCACSGG 98
>UniRef50_Q89GK1 Cluster: HycG protein; n=14; Proteobacteria|Rep:
HycG protein - Bradyrhizobium japonicum
Length = 177
Score = 73.7 bits (173), Expect = 3e-12
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = +2
Query: 314 TEKRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLAC--CAVEMMHIAAPRYD 487
TE+ P SP A AV R GR S+ + G +C C +E+ + YD
Sbjct: 15 TEQAP-SPDDAAVTELATAVGRAARR-RLGRSLSIREVDAG-SCNGCELEIHALNNAYYD 71
Query: 488 MDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
++R+G+ F ASPR +DV++V G +T M AL + Y PDP WV+++G CA GG
Sbjct: 72 VERFGLRFVASPRHADVLMVTGPVTKNMRDALERTYHATPDPKWVVAVGDCARDGG 127
>UniRef50_A5FPI3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=4; cellular organisms|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Dehalococcoides sp.
BAV1
Length = 171
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/68 (45%), Positives = 48/68 (70%)
Frame = +2
Query: 452 VEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISM 631
+E+ +++ P YD++R+G+ F ASPR +D++IV G +T MA A+RK +D MP P VI++
Sbjct: 58 IELNNLSNPYYDVERFGISFVASPRHADILIVTGAVTQNMAIAVRKTFDAMPSPKLVIAL 117
Query: 632 GXCANGGG 655
G A GG
Sbjct: 118 GDDACSGG 125
>UniRef50_Q9X0U1 Cluster: NADH dehydrogenase, putative; n=4;
Thermotogaceae|Rep: NADH dehydrogenase, putative -
Thermotoga maritima
Length = 178
Score = 72.9 bits (171), Expect = 6e-12
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +2
Query: 404 RKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPAL 583
R S+W + + C AVE+ R+DM+R+G+ A+PRQ+D++++ G L K +
Sbjct: 15 RSRSIWMLHYCTGCGAVELPPSMTSRFDMERFGIAPMATPRQADILLITGYLNTKTLRRV 74
Query: 584 RKVYDXMPDPXWVISMGXCANGGG 655
Y+ MPDP +V+ G C GG
Sbjct: 75 IYTYEQMPDPKYVVGFGSCTINGG 98
>UniRef50_A4YGN5 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=1; Metallosphaera sedula DSM 5348|Rep: NADH
ubiquinone oxidoreductase, 20 kDa subunit -
Metallosphaera sedula DSM 5348
Length = 203
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +2
Query: 416 LWPMTFGLAC--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRK 589
L+P+ G +C C +E+ I++P+YDM R+G+ F +P+ +D +++ G L +M +R+
Sbjct: 86 LYPLDAG-SCGGCNLELRLISSPQYDMTRFGIFFTNTPKHADALLIMGNLGKRMEEVIRR 144
Query: 590 VYDXMPDPXWVISMGXCANGGG 655
YD +P P VI +G CA GG
Sbjct: 145 AYDVIPSPKLVILLGTCAISGG 166
>UniRef50_Q57936 Cluster: Uncharacterized protein MJ0516; n=15;
Euryarchaeota|Rep: Uncharacterized protein MJ0516 -
Methanococcus jannaschii
Length = 148
Score = 72.5 bits (170), Expect = 8e-12
Identities = 29/76 (38%), Positives = 51/76 (67%)
Frame = +2
Query: 428 TFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMP 607
T G C +E++ APRYD+++YG+ +PR++DV++V G +T + A L+++Y+ P
Sbjct: 18 TGGCNGCDIEIVACLAPRYDIEQYGIYVHNNPREADVLLVTGPVTLQWAERLKEIYEKTP 77
Query: 608 DPXWVISMGXCANGGG 655
+P V+++G CA GG
Sbjct: 78 EPKIVVAVGACALSGG 93
>UniRef50_A3DKH2 Cluster: NADH-quinone oxidoreductase, B subunit;
n=1; Staphylothermus marinus F1|Rep: NADH-quinone
oxidoreductase, B subunit - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 165
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +2
Query: 419 WPMTFGL-AC--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRK 589
W + F AC C +E++ P YD +R+G+ S R +D+++V G +T K A L++
Sbjct: 32 WLIHFNTGACNGCDIEVLAAITPLYDPERFGIKLAPSIRHADILVVTGAVTKKAAERLKR 91
Query: 590 VYDXMPDPXWVISMGXCANGGG 655
+Y+ MPDP +V+++G CA GG
Sbjct: 92 LYEQMPDPKFVVAVGACAISGG 113
>UniRef50_Q8PY02 Cluster: Formate hydrogenlyase subunit 7; n=3;
Methanomicrobia|Rep: Formate hydrogenlyase subunit 7 -
Methanosarcina mazei (Methanosarcina frisia)
Length = 170
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = +2
Query: 452 VEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISM 631
+E+ ++ P YD++R+G+ F ASPR +DV++V G +T MA A +K Y+ MP P +VI++
Sbjct: 58 MEISNLGNPHYDVERFGISFVASPRHADVLLVTGAVTLNMAEAAKKTYEAMPYPKYVIAV 117
Query: 632 GXCANGGG 655
G A GG
Sbjct: 118 GDDACDGG 125
>UniRef50_Q978D5 Cluster: Formate hydrogenlyase subunit 2; n=2;
Thermoplasmatales|Rep: Formate hydrogenlyase subunit 2 -
Thermoplasma volcanium
Length = 222
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +2
Query: 404 RKGSLWPMTFGLAC--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAP 577
R ++P+ G AC C +E + I +P+YD +R G+ +PR +D +IV G +T M
Sbjct: 87 RSFHVFPIDSG-ACGACNMEFLSIFSPQYDANRLGIFMVNTPRYADALIVMGVMTPGMKE 145
Query: 578 ALRKVYDXMPDPXWVISMGXCANGGG 655
AL + Y+ MP+P VI+MG CA GG
Sbjct: 146 ALDRAYEAMPEPKLVIAMGACAVTGG 171
>UniRef50_Q0W3I3 Cluster: Ech hydrogenase, subunit C; n=6; cellular
organisms|Rep: Ech hydrogenase, subunit C - Uncultured
methanogenic archaeon RC-I
Length = 157
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +2
Query: 404 RKGSLWPM---TFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMA 574
RK S W + T G C +E++ PRYD+ R+GV +P+ +DVM+V G +T K
Sbjct: 8 RKKSPWVIHVNTGGCNGCDLEILSCLTPRYDISRFGVYSTGNPKHADVMLVVGPVTLKYK 67
Query: 575 PALRKVYDXMPDPXWVISMGXCANGG 652
+ +Y+ MPDP V+++G CA+ G
Sbjct: 68 EIITNLYNQMPDPKVVMAVGSCASTG 93
>UniRef50_Q58758 Cluster: Uncharacterized protein MJ1363; n=9;
Euryarchaeota|Rep: Uncharacterized protein MJ1363 -
Methanococcus jannaschii
Length = 151
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +2
Query: 428 TFGLACCAVEMMH-IAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXM 604
T G C +E+++ I +P YD ++Y V +PR++D+++V G +T +A +LRK+Y+ +
Sbjct: 21 TGGCNACDIEVVNAIFSPFYDAEQYNVFLTFNPREADILVVTGCVTKVVAESLRKIYEKI 80
Query: 605 PDPXWVISMGXCANGGG 655
P+P V+++G CA GG
Sbjct: 81 PEPKAVVAVGACALMGG 97
>UniRef50_Q9V0R6 Cluster: NADH ubiquinone oxidoreductase subunit;
n=8; Archaea|Rep: NADH ubiquinone oxidoreductase subunit
- Pyrococcus abyssi
Length = 170
Score = 68.5 bits (160), Expect = 1e-10
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E++ PRYD +R+GV SPR +D+++V G +TN+ ++ VY+ P+P VI
Sbjct: 43 CDIEIIAALTPRYDAERFGVKLVGSPRHADILLVTGPVTNQSLERVKLVYEQTPEPKIVI 102
Query: 626 SMGXCANGG 652
++G C GG
Sbjct: 103 AIGSCPTGG 111
>UniRef50_A6Q6W5 Cluster: Ni-Fe hydrogenase, small subunit HycG;
n=2; unclassified Epsilonproteobacteria|Rep: Ni-Fe
hydrogenase, small subunit HycG - Sulfurovum sp. (strain
NBC37-1)
Length = 168
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E ++ P YD++R G+ F ASPR +DVM++ G +T M P + Y +P+P WVI
Sbjct: 56 CEAECNALSNPYYDLERLGIYFVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVI 115
Query: 626 SMGXC 640
++G C
Sbjct: 116 TLGAC 120
>UniRef50_A1ASR2 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=3; cellular organisms|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 179
Score = 67.7 bits (158), Expect = 2e-10
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E++++ P YD++R+G+ SPR +DVM+ G AL++ Y MP P V
Sbjct: 27 CDIEVLNVLTPYYDVERFGIKLVGSPRHADVMLCQGPAMRSTGKALQRAYAAMPGPKLVF 86
Query: 626 SMGXCANGGG 655
++G CA GGG
Sbjct: 87 AIGSCACGGG 96
>UniRef50_Q21TB3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=1; Rhodoferax ferrireducens T118|Rep: NADH
ubiquinone oxidoreductase, 20 kDa subunit - Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
Length = 254
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/74 (37%), Positives = 48/74 (64%)
Frame = +2
Query: 434 GLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDP 613
G + C +E+ ++ +D+ RYG+ ASPR +D ++++G +T MA AL+ +D +P+P
Sbjct: 137 GCSGCEMEINALSNVNFDLGRYGIDIVASPRHADALVLSGPITRNMAQALQICWDAIPEP 196
Query: 614 XWVISMGXCANGGG 655
VI++G CA GG
Sbjct: 197 KLVIAVGACAISGG 210
>UniRef50_A5FW47 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit precursor; n=1; Acidiphilium cryptum JF-5|Rep:
NADH ubiquinone oxidoreductase, 20 kDa subunit precursor
- Acidiphilium cryptum (strain JF-5)
Length = 264
Score = 66.1 bits (154), Expect = 7e-10
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E+ + P Y++ R G+ F SPR +D+++V G +T M LR+ ++ MP P WV+
Sbjct: 141 CESELQALNNPFYNLHRLGIFFTPSPRFADLLLVTGPVTRAMLEPLRRTWEAMPAPRWVM 200
Query: 626 SMGXCANGGG 655
+ G CA GG
Sbjct: 201 ASGTCAVSGG 210
>UniRef50_Q0W2C0 Cluster: Hydrogenase, small subunit-like protein;
n=2; cellular organisms|Rep: Hydrogenase, small
subunit-like protein - Uncultured methanogenic archaeon
RC-I
Length = 247
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C VE+ ++ YD++R+G+ ASPR +D ++V G +T M L + Y+ PDP VI
Sbjct: 130 CEVEVNSLSNAIYDIERFGLHIVASPRHADALLVTGPVTRNMERGLMQSYNATPDPKMVI 189
Query: 626 SMGXCANGGG 655
+MG CA GG
Sbjct: 190 AMGACAITGG 199
>UniRef50_A1RWL1 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=1; Thermofilum pendens Hrk 5|Rep: NADH
ubiquinone oxidoreductase, 20 kDa subunit - Thermofilum
pendens (strain Hrk 5)
Length = 245
Score = 65.3 bits (152), Expect = 1e-09
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E+ P +D++R GV SPR +DV++V G +T + P L+ Y+ P P V+
Sbjct: 30 CDIEVFDALTPYFDVERLGVKLVLSPRMADVILVTGPVTRQFLPVLKATYEAAPKPCVVV 89
Query: 626 SMGXCANGGG 655
+ G CA GGG
Sbjct: 90 ACGACACGGG 99
>UniRef50_A7CX02 Cluster: NADH ubiquinone oxidoreductase 20 kDa
subunit; n=1; Opitutaceae bacterium TAV2|Rep: NADH
ubiquinone oxidoreductase 20 kDa subunit - Opitutaceae
bacterium TAV2
Length = 294
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = +2
Query: 344 DASNMAEMAVARLDDLLN--WGRKGSLWPMTFG-LACCAVEMMHIAAPRYDMDRYGVVFR 514
D S A LD+ L +GR L ++ G C ++ + +D+ R+G+ F
Sbjct: 120 DPSREQIRLAAALDEKLRKLFGRSLKLRQVSAGGCNACEADVNVLGTIGWDLSRFGIQFV 179
Query: 515 ASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
ASPR +D +++ G ++ M AL+K +D +PDP VI+ G CA GG
Sbjct: 180 ASPRHADGLLITGPVSQGMELALKKTWDAVPDPKLVIATGACAISGG 226
>UniRef50_A5FR05 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=12; cellular organisms|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Dehalococcoides sp.
BAV1
Length = 155
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E++ P YD++R+G+V +P+ SDV++V G + LR +Y+ MP+P VI
Sbjct: 25 CDIEILACLTPLYDVERFGIVNMGNPKHSDVLLVTGPANKRNYRVLRNLYEQMPEPKVVI 84
Query: 626 SMGXCANGGG 655
+G C GG
Sbjct: 85 VIGTCGCSGG 94
>UniRef50_A0UXP2 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=2; Bacteria|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Clostridium
cellulolyticum H10
Length = 266
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E+ + P D++R+G+ F ASPR +D+++V G ++ M AL K Y+ P P V+
Sbjct: 154 CDYEVQALNGPYNDIERFGIHFVASPRHADMLLVTGCVSRNMEEALVKTYNATPSPKLVV 213
Query: 626 SMGXCANGGG 655
+ G CA GG
Sbjct: 214 AAGACACSGG 223
>UniRef50_A3DM92 Cluster: NADH-quinone oxidoreductase, B subunit;
n=1; Staphylothermus marinus F1|Rep: NADH-quinone
oxidoreductase, B subunit - Staphylothermus marinus
(strain ATCC 43588 / DSM 3639 / F1)
Length = 179
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/86 (33%), Positives = 48/86 (55%)
Frame = +2
Query: 398 WGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAP 577
W R S+W + + AC A+E+ D +R+G++ SPRQ+DV+++ G +T K
Sbjct: 14 WVRSRSIWMIHYCSACGAIELPPNMMAPLDAERWGIMPAPSPRQADVLVIMGYVTKKTLK 73
Query: 578 ALRKVYDXMPDPXWVISMGXCANGGG 655
L ++Y MP+P +V+ C GG
Sbjct: 74 VLMRLYHQMPEPRYVMVGCNCPATGG 99
>UniRef50_Q7M874 Cluster: HYDROGENASE-Ni,Fe-hydrogenase III small
subunit; n=3; cellular organisms|Rep:
HYDROGENASE-Ni,Fe-hydrogenase III small subunit -
Wolinella succinogenes
Length = 276
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +2
Query: 377 RLDDLLNWGRKGSLWPMTFGLAC--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVA 550
+L+ L + GR S++ + G +C C +E+ P +D +R+G A+PR +D+++
Sbjct: 19 KLELLKHIGRSFSVYRIDCG-SCNGCEIEIFAAITPLWDPERFGFKLVANPRHADILLCT 77
Query: 551 GTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
G +T +M L + Y+ PDP V+++G C + GG
Sbjct: 78 GPVTRQMYYPLLRAYEAAPDPKLVVALGACGSTGG 112
>UniRef50_Q12F15 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=11; Proteobacteria|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Polaromonas sp. (strain
JS666 / ATCC BAA-500)
Length = 181
Score = 63.3 bits (147), Expect = 5e-09
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +2
Query: 326 PYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLAC--CAVEMMHIAAPRYDMDRY 499
P DA A + R D LL G+ ++ + G +C C +E+ + P Y+++
Sbjct: 17 PAPGIDDAQRTAIERIHR-DILLILGQALTIRAVDAG-SCNGCELEIHALNNPYYNIEGL 74
Query: 500 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
G+ F ASPR +D+++V G ++ M ALR+ YD P+P V+++G C GG
Sbjct: 75 GIKFVASPRHADMLLVTGPVSRHMDEALRRTYDATPEPKLVVAVGDCGCTGG 126
>UniRef50_Q9UYN6 Cluster: Hydrogenase 4, component I or formate
hydrogen lyase, subunit 7; n=1; Pyrococcus abyssi|Rep:
Hydrogenase 4, component I or formate hydrogen lyase,
subunit 7 - Pyrococcus abyssi
Length = 271
Score = 63.3 bits (147), Expect = 5e-09
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXM-PDPXWV 622
C +E++ + P YD++R G+ +PR +D +++ G LT + A++K Y+ M P P V
Sbjct: 20 CDIEVLDVLTPYYDLERLGIKVVPNPRHADALLITGPLTRQTRMAIKKAYEAMPPKPRIV 79
Query: 623 ISMGXCANGGG 655
+++G CA GG
Sbjct: 80 VAIGTCACSGG 90
>UniRef50_A7HGW9 Cluster: NADH ubiquinone oxidoreductase 20 kDa
subunit; n=12; cellular organisms|Rep: NADH ubiquinone
oxidoreductase 20 kDa subunit - Anaeromyxobacter sp.
Fw109-5
Length = 256
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E+ ++D+ R+G+ F ASPR +D ++V G ++ M AL+K Y+ +P P VI
Sbjct: 140 CEAELNAAGNIQFDLGRFGIQFVASPRHADGIVVTGPVSENMRLALQKTYEAVPAPRLVI 199
Query: 626 SMGXCANGGG 655
++G CA GG
Sbjct: 200 AVGACAISGG 209
>UniRef50_A6DB47 Cluster: HYDROGENASE-Ni,Fe-hydrogenase III small
subunit; n=3; Epsilonproteobacteria|Rep:
HYDROGENASE-Ni,Fe-hydrogenase III small subunit -
Caminibacter mediatlanticus TB-2
Length = 280
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/70 (37%), Positives = 40/70 (57%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E+ P +D +R+G ASPR +D+++ G LT +M L + Y+ PDP VI
Sbjct: 46 CEIEIFAAITPMWDPERFGFKLVASPRHADILLCTGPLTRQMYYPLLRAYEATPDPKVVI 105
Query: 626 SMGXCANGGG 655
++G C GG
Sbjct: 106 AVGACGCTGG 115
>UniRef50_P72317 Cluster: CooL; n=8; Bacteria|Rep: CooL -
Rhodospirillum rubrum
Length = 142
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 CAVEMMHIAA-PRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWV 622
C VE+ A PRYD++R G + SP+ +D+++V G LT ++ + +VY+ +PDP
Sbjct: 25 CDVELATTACIPRYDVERLGCQYCGSPKHADIVLVTGPLTARVKDKVLRVYEEIPDPKVT 84
Query: 623 ISMGXCANGGG 655
+++G C GG
Sbjct: 85 VAIGVCPISGG 95
>UniRef50_A1SQ82 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=10; Actinomycetales|Rep: NADH ubiquinone
oxidoreductase, 20 kDa subunit - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 162
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E+ P YD +RYG ASPR +DV++V G +T+ M LR+ + P P V+
Sbjct: 51 CEIEVGGAFGPVYDAERYGARLVASPRHADVVLVTGVVTHNMLEPLRRTVEATPRPRLVL 110
Query: 626 SMGXCANGGG 655
++G CA G
Sbjct: 111 AVGDCARNCG 120
>UniRef50_Q0W6T1 Cluster: [NiFe]-hydrogenase, small subunit; n=1;
uncultured methanogenic archaeon RC-I|Rep:
[NiFe]-hydrogenase, small subunit - Uncultured
methanogenic archaeon RC-I
Length = 135
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +2
Query: 434 GLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDP 613
G C +E++ PRYD++R GV SPR +DV++V G + P L +VY P+P
Sbjct: 17 GCVGCDIELVASMGPRYDLERLGVRLVPSPRYADVLLVTGPVPLHTKPFLERVYAQTPEP 76
Query: 614 XWVISMGXC 640
VI++G C
Sbjct: 77 KRVIAIGAC 85
>UniRef50_P16433 Cluster: Formate hydrogenlyase subunit 7; n=57;
Bacteria|Rep: Formate hydrogenlyase subunit 7 -
Escherichia coli (strain K12)
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKM-APALRKVYDXMPDPXWV 622
C +E+ +P +D +R+G+ SPR +D+++ G +T M +PALR + PDP
Sbjct: 51 CEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALR-AWQSAPDPKIC 109
Query: 623 ISMGXCANGGG 655
IS G C N GG
Sbjct: 110 ISYGACGNSGG 120
>UniRef50_Q24ST9 Cluster: Formate hydrogenlyase subunit 7; n=2;
Desulfitobacterium hafniense|Rep: Formate hydrogenlyase
subunit 7 - Desulfitobacterium hafniense (strain Y51)
Length = 155
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C EM + P YD+ R+G+ F ASPR +D+++ G ++ + A Y+ P+P +I
Sbjct: 46 CDWEMSALLNPIYDLQRFGLDFVASPRHADILMCTGPMSTHLIQAALATYEGTPNPKRII 105
Query: 626 SMGXCANGGG 655
++G CA GG
Sbjct: 106 AVGDCALDGG 115
>UniRef50_A7BSF1 Cluster: NADH-plastoquinone oxidoreductase subunit
K; n=1; Beggiatoa sp. PS|Rep: NADH-plastoquinone
oxidoreductase subunit K - Beggiatoa sp. PS
Length = 250
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/92 (30%), Positives = 49/92 (53%)
Frame = +2
Query: 380 LDDLLNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTL 559
+D + + R SL+ + + C A+E+ R+D +R G+ +PRQ+D++++ G L
Sbjct: 34 IDRIADRCRSRSLFILHYCTGCGAIELPPTITSRFDAERLGIQPMVTPRQADILLITGYL 93
Query: 560 TNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ K + Y+ M P +VI MG C GG
Sbjct: 94 SVKTLKRVILSYEQMQAPKYVIGMGSCTINGG 125
>UniRef50_Q6L0U2 Cluster: Formate hydrogenlyase subunit 7; n=3;
cellular organisms|Rep: Formate hydrogenlyase subunit 7
- Picrophilus torridus
Length = 202
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E+ I+ P YD+ RY + F +PR +D +I++G M + MP P ++I
Sbjct: 100 CNSELFSISIPEYDLTRYHIFFTNTPRHADAIILSGIYNESMKDVIDNALGAMPKPGYLI 159
Query: 626 SMGXCANGGG 655
+G CA GG
Sbjct: 160 LLGACALSGG 169
>UniRef50_Q7WT80 Cluster: EchC; n=2; Deltaproteobacteria|Rep: EchC -
Desulfovibrio gigas
Length = 147
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +2
Query: 386 DLLNWGRKGSLWPMTFGLA-C--CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGT 556
D + R S W M F C C +E + P +G+V +P+ +D++IV+GT
Sbjct: 6 DFIKSSRIKSPWLMHFDCGFCNGCDIETLACLDPHLRRGTFGIVNVGNPKHADILIVSGT 65
Query: 557 LTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+ ++ L +Y+ MP P V+++G C GG
Sbjct: 66 VNHRNKKVLANLYEQMPHPKVVVAIGACGLSGG 98
>UniRef50_UPI00015BC86C Cluster: UPI00015BC86C related cluster; n=1;
unknown|Rep: UPI00015BC86C UniRef100 entry - unknown
Length = 165
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C E+ ++ YD++R+G+ F ASP+ DV+ + G +T M L P+P +I
Sbjct: 53 CEYELTALSNVFYDIERFGIKFVASPKHVDVLTITGPITRNMYKPLLDAIQNTPNPKVII 112
Query: 626 SMGXCANGGG 655
++G C+ GG
Sbjct: 113 AIGDCSIDGG 122
>UniRef50_A0LSU0 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=1; Acidothermus cellulolyticus 11B|Rep: NADH
ubiquinone oxidoreductase, 20 kDa subunit - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 269
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +2
Query: 455 EMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMG 634
E++ + P YD+ R G+ F ASPR +DV++V G + MA L + P P VI+ G
Sbjct: 141 EVLALLNPVYDIHRLGIFFTASPRHADVLLVTGVGSRGMAAPLARTLQAAPRPLVVIAAG 200
Query: 635 XCANGGG 655
A GG
Sbjct: 201 TDAISGG 207
>UniRef50_A2XI26 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 581
Score = 52.8 bits (121), Expect = 7e-06
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 347 ASNMAEMAVARLDDLLNWGRKGSLWPMTFGLA 442
AS E ++++DDL+NW R+GS+WPMTFGLA
Sbjct: 474 ASKAVEFVISKVDDLMNWARRGSIWPMTFGLA 505
>UniRef50_A3ETD3 Cluster: Ni,Fe-hydrogenase III small subunit; n=1;
Leptospirillum sp. Group II UBA|Rep: Ni,Fe-hydrogenase
III small subunit - Leptospirillum sp. Group II UBA
Length = 169
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 446 CAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVI 625
C +E+ + Y +R G+ F ASPR +D+++V G ++ +M L ++ M P V+
Sbjct: 49 CELELHAMNGSYYAPERDGIRFVASPRHADLLLVTGPVSCQMEQPLLDTHEAMASPKTVL 108
Query: 626 SMGXCANGGG 655
++G CA GG
Sbjct: 109 AVGDCACQGG 118
>UniRef50_Q0BPG7 Cluster: Formate hydrogenlyase subunit 7; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Formate
hydrogenlyase subunit 7 - Granulobacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1)
Length = 174
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +2
Query: 434 GLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDP 613
G + C +E+ + A + R+G+ F SP +D++++ G + + A+ + ++ MP P
Sbjct: 55 GGSACLLELEALRAAPGLLARHGLRFVTSPLHADILLITGDGCHNLTSAIHQAWEAMPGP 114
Query: 614 XWVISMGXCANGGG 655
W I++G A G G
Sbjct: 115 RWAIAVGDGAAGDG 128
>UniRef50_A6DAC3 Cluster: NADH ubiquinone oxidoreductase, 20 kDa
subunit; n=1; Caminibacter mediatlanticus TB-2|Rep: NADH
ubiquinone oxidoreductase, 20 kDa subunit - Caminibacter
mediatlanticus TB-2
Length = 140
Score = 40.3 bits (90), Expect = 0.040
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 446 CAVEMM-HIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWV 622
C VE+ + + R+D+ + G + + +D+ ++ G +T + P L++V P V
Sbjct: 20 CDVEIAASVMSSRFDLQKLGCEYIETSEDADIFMITGPVTARSLPFLKEVIKNHKKPYVV 79
Query: 623 ISMGXCA 643
IS+G C+
Sbjct: 80 ISLGTCS 86
>UniRef50_Q5FU78 Cluster: Putative uncharacterized protein; n=1;
Gluconobacter oxydans|Rep: Putative uncharacterized
protein - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 161
Score = 39.9 bits (89), Expect = 0.053
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +2
Query: 434 GLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDP 613
G C +E+ + + +++ G V + P +D +++ G +T A + +V+ MP
Sbjct: 46 GCEGCFMEIESLNGSAFALEQAGFVCVSDPADADWLLLTGAVTRVCAEMVDRVWRAMPPG 105
Query: 614 XWVISMGXCANGGG 655
+I++G CA GG
Sbjct: 106 RSLIAVGACAVDGG 119
>UniRef50_A2DFR6 Cluster: Phosphoribulokinase / Uridine kinase
family protein; n=9; Trichomonas vaginalis G3|Rep:
Phosphoribulokinase / Uridine kinase family protein -
Trichomonas vaginalis G3
Length = 868
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 122 PSAVQSVIANIIVVTKFVLIFSIMQAIKALGATSPNTVLSFMKKGVFTP-VVSQIRDTHL 298
P+ ++ + N++ +TK+ L +M + L T NT + MK G F ++ I DT +
Sbjct: 437 PNPIEFLDKNVVELTKYYLNLGLMDKVGVL-KTIVNTTIPCMKLGDFIDYILEPIADT-I 494
Query: 299 PAPNPTEKRPY 331
PA P E PY
Sbjct: 495 PADKPFELHPY 505
>UniRef50_UPI0000E81815 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 187
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 320 KRPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLACC 448
K+ Y P ++ E V +LDDL+NW R+ SLWP C
Sbjct: 71 KKSYVP----TSRGEYIVTKLDDLINWARRTSLWPSMLAQQNC 109
>UniRef50_Q6A6I9 Cluster: NADH dehydrogenase subunit; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase subunit
- Propionibacterium acnes
Length = 132
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 392 LNWGRKGSLWPMTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKM 571
++W GS++ + LACC VE AA + + +P V++V+GT+T +
Sbjct: 4 IDWFADGSVYVVDLALACCGVESG--AAVLANAPVREEIPDGAP---IVVLVSGTVTTGL 58
Query: 572 APALRKVYDXMP--DPXWVISMGXCANGGG 655
AP + + P V++ G CA GG
Sbjct: 59 APVVSDTVHELKRNHPVDVVAFGACACAGG 88
>UniRef50_A7BS42 Cluster: Exoribonuclease II; n=1; Beggiatoa sp.
PS|Rep: Exoribonuclease II - Beggiatoa sp. PS
Length = 433
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = +2
Query: 143 IANIIVVTKFVLIFSIMQAIKALGATSPNTVLSFMKKGVFTPVVSQIRDTHLPAPNPTEK 322
IA + + L+F I+Q I L + V+ K F+ VV + P PTEK
Sbjct: 229 IAATVKLAPRELVFEILQKIGRLPIDADRDVIVAGLKPDFSAVVMETIQKVQPW-QPTEK 287
Query: 323 RPYSPFQDASNMAEMAVARLDDLLNWGRKGSLWPMTFGLA 442
+ + + ++ + +DD L+ R+GSLW +T +A
Sbjct: 288 QAIT--EVLFSIDDEDTREVDDALSIEREGSLWKITIAIA 325
>UniRef50_Q6MT46 Cluster: Tetrapyrrole methylas family protein; n=3;
Mollicutes|Rep: Tetrapyrrole methylas family protein -
Mycoplasma mycoides subsp. mycoides SC
Length = 295
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -2
Query: 190 YAEN*NKFCHNNNIRDYRLNS*WLGFL*FYEDLCNTRNTVTYLNTNYNKGHKYAVYSPQT 11
+ +N NK N + +N + YE + ++T+T LN NK HK A+ T
Sbjct: 146 FLKNKNKISKQNELNQL-INKYGDSIICLYESVHRLKDTITCLNQLLNKNHKIAIAKELT 204
Query: 10 NIN 2
IN
Sbjct: 205 KIN 207
>UniRef50_A7S1C1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1357
Score = 33.9 bits (74), Expect = 3.5
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -1
Query: 584 SKLEPFCLLKFLLQSLHQTDGEMLGILRHIGPYHSEVQQYASSLQRSKLDQRSWAKGNLS 405
++L F L+F + GEM+ +LR PY +++ +++ K +Q+ AK +
Sbjct: 652 NELHAFLKLRFHAPGIGLKQGEMVPLLRQ-SPYRDTIKEVKKRVKQEKKEQKKAAKQQAN 710
Query: 404 SPNSISHQVEPQ 369
+ ++ EP+
Sbjct: 711 TMRNLERTKEPR 722
>UniRef50_Q8EYD8 Cluster: Formate hydrogenlyase subunit 7; n=4;
Leptospira|Rep: Formate hydrogenlyase subunit 7 -
Leptospira interrogans
Length = 273
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 482 YDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVISMGXCANGGG 655
+D + + ASP+ +D ++ +G + M L ++ MP P +++ G A GG
Sbjct: 161 FDSEASKIRVVASPKHADALVYSGPVGPNMEGPLDTAWETMPSPKALVACGSEAVSGG 218
>UniRef50_Q2H944 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1303
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 293 HLPAPNPTEKRPYSPFQDASNMAEMAVARLDDL 391
H P P P E+R Q A N+A+++VAR D++
Sbjct: 1070 HPPVPRPMEQRSVEELQAALNLAQLSVARDDNV 1102
>UniRef50_Q8ZL73 Cluster: Putative cytoplasmic protein; n=10;
cellular organisms|Rep: Putative cytoplasmic protein -
Salmonella typhimurium
Length = 651
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +2
Query: 449 AVEMMHIAAPRYDMDRYGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDXMPDPXWVIS 628
A+E IAA + D YG+VF+ S + VA +L K PAL K D + + +++
Sbjct: 49 AIENFRIAAGQQTGDFYGMVFQDSDVAKWLEAVAWSLCQKPDPALEKTADEVIE---LVA 105
Query: 629 MGXCANG 649
C +G
Sbjct: 106 AAQCDDG 112
>UniRef50_Q61MI5 Cluster: Putative uncharacterized protein CBG08470;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG08470 - Caenorhabditis
briggsae
Length = 892
Score = 32.7 bits (71), Expect = 8.0
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -2
Query: 232 CIRRSGPQSLDSLHYAEN*NKFCHNNNIRDY-RLNS*WLGFL*FYEDLCNTRNTVTYLNT 56
C R +HY N C+ N++ D N WL FY D+C+ N V
Sbjct: 103 CCRFEDYDPHSGIHYTMNILDECNPNDLVDMDTANFLWLRP--FYSDICSETNEVVVFML 160
Query: 55 NYNKGHKYAVYS--PQT 11
Y + K A YS P+T
Sbjct: 161 KYPETKKLAAYSFNPET 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,056,048
Number of Sequences: 1657284
Number of extensions: 12956450
Number of successful extensions: 33723
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 32464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33683
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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