Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_N09
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.9  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.7  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 175 FNFQHNASYQGFGGHFS*YSAFIYE-KGCL 261
           FN+Q+N +Y  +  +   +S   Y+ K C+
Sbjct: 213 FNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 242


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 175 FNFQHNASYQGFGGHFS*YSAFIYE-KGCL 261
           FN+Q+N +Y  +  +   +S   Y+ K C+
Sbjct: 233 FNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 262


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 455 EMMHIAAPRYDMDRYGVVFRASPRQSDVM 541
           E   I    Y M+ + VVF  S +  DVM
Sbjct: 258 EFDQIVNVAYRMETWNVVFNGSRKNLDVM 286


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 185 SIMQAIKALGATSPNTVLSFMKKGVFTPVVSQIRDTHLPAPNPT 316
           S+   I +  + SP+TV     K    PV+S   +  LP  + T
Sbjct: 194 SLSPGIYSEQSLSPDTVFGDDGKSEDVPVISLKNENELPQQHKT 237


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 94  NLRKTTKNLTISCSICNREYYCCDKICFNFQ-HNAS 198
           +LR  T     +C ICN+ +   D +  + + HN +
Sbjct: 365 HLRTHTGEKRFACPICNKRFMRSDHLAKHVKTHNGN 400


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 452 QRSKLDQRSWAKGNLSSPNSISHQVEPQPSLPYY 351
           QRS    R +  GN++     S   E  P+ PYY
Sbjct: 416 QRSTPSPRVY--GNVNENQDCSTPTENSPTKPYY 447


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 440 ACCAVEMMHIAAPRYDMDRYGVVF-RASPRQSDVMIVAG 553
           AC +  MM   A RYD+    ++F    P   D   +AG
Sbjct: 393 ACSSEVMMFRMARRYDVQTDSILFVNNQPYSRDSYNLAG 431


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 134 QSVIANIIVVTKFVLIFSIMQAIKA 208
           Q V AN+I+ T+F  I +I++ + A
Sbjct: 189 QFVAANVILKTRFKTINNILENLWA 213


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 182 KLKQILSQQ*YSRLQIEQLMVRFFVVL 102
           KLK +L  + Y R QI      FFV+L
Sbjct: 117 KLKHMLIWKSYKRTQIFITCELFFVIL 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,940
Number of Sequences: 336
Number of extensions: 3617
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)