Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_N09
(656 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.4
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 3.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 4.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.8
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 7.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 7.8
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.4
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +2
Query: 287 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 454
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 233 DAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSV 292
Query: 455 EMMHIA 472
EM H A
Sbjct: 293 EMHHEA 298
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 215 ATSPNTVLSFMKKGVFTPVVS 277
AT+PN + + K +FT V S
Sbjct: 76 ATNPNAMKTIFKNTIFTNVAS 96
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = -2
Query: 103 YEDLCNTRNTVTYLNTNYNKGHKYAVYS 20
Y + N N N NYN +K Y+
Sbjct: 327 YNNYNNNYNNYNNYNNNYNNNYKKLYYN 354
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -2
Query: 88 NTRNTVTYLNTNYNKGHKYAVY 23
N N Y N NYNK Y Y
Sbjct: 99 NYNNKYNYNNNNYNKKLYYKNY 120
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 617 WVISMGXCANGGG 655
WV ++G CA GGG
Sbjct: 3 WV-ALGRCAGGGG 14
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 617 WVISMGXCANGGG 655
WV ++G CA GGG
Sbjct: 3 WV-ALGRCAGGGG 14
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 617 WVISMGXCANGGG 655
WV ++G CA GGG
Sbjct: 3 WV-ALGRCAGGGG 14
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 617 WVISMGXCANGGG 655
WV ++G CA GGG
Sbjct: 3 WV-ALGRCAGGGG 14
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.4 bits (43), Expect = 7.8
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +2
Query: 287 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 454
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 176 DAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSV 235
Query: 455 EMMHIA 472
EM H A
Sbjct: 236 EMHHEA 241
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +2
Query: 287 DTHLPAPNPTEKRPYSPFQDA---SNMAEMAVARLD-DLLNWGRKGSLWPMTFGLACCAV 454
D LP PT+K P QD + + V R++ +L G + P +V
Sbjct: 233 DAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSV 292
Query: 455 EMMHIA 472
EM H A
Sbjct: 293 EMHHEA 298
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,910
Number of Sequences: 438
Number of extensions: 4150
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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