Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_N08
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 128 2e-30
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 128 2e-30
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 128 2e-30
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 0.84
Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 28 3.4
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.5
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 27 5.9
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 128 bits (310), Expect = 2e-30
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Frame = +1
Query: 154 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 324
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 325 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDXSR 495
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GD SR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 128 bits (310), Expect = 2e-30
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Frame = +1
Query: 154 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 324
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 325 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDXSR 495
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GD SR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 128 bits (310), Expect = 2e-30
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 4/118 (3%)
Frame = +1
Query: 154 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 324
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 325 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDXSR 495
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GD SR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 0.84
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 274 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 432
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical
protein K01D12.1 protein.
Length = 314
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 109 PVRSVPTFCKFYGCLSVKFTSRRKN 35
PV PTF FY C+ K S R N
Sbjct: 52 PVEGTPTFKAFYNCVYPKLASLRGN 76
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 349 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 462
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 349 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 462
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -1
Query: 491 DXSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 318
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,045,200
Number of Sequences: 27780
Number of extensions: 291670
Number of successful extensions: 765
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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