Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M21
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280...    28   5.6  
06_02_0239 + 13384451-13387124,13387234-13387631                       28   7.5  

>06_01_0390 +
           2802334-2802339,2802461-2802618,2802755-2802826,
           2802967-2803114,2803234-2803503,2803741-2803904,
           2804184-2804236,2804302-2804496,2804597-2804694,
           2804787-2804891
          Length = 422

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 195 FTNVYNTGLLITLT-NYIGAGSHSFDRTTSFDSIDL 299
           F N  N+ L I LT NYI A S S   T +FD ID+
Sbjct: 85  FANENNSFLAIKLTVNYIIAASSSNIYTKTFDGIDV 120


>06_02_0239 + 13384451-13387124,13387234-13387631
          Length = 1023

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 492 LHSLMTFNS*FNQLIKSTQVLINNNN 569
           LH+L+ +N  FNQ++ +T VL++  N
Sbjct: 325 LHNLVLYNIGFNQIVGNTSVLVDLMN 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,642,780
Number of Sequences: 37544
Number of extensions: 279912
Number of successful extensions: 557
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)