Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M21
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.90 
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    24   3.7  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    24   3.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 88  VWSFCQNLECFEFAQTVITFG 26
           ++ FC+N+EC E  ++  TFG
Sbjct: 438 LYCFCRNVECKELEKSYHTFG 458


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 276 TSFDSIDLEELVHTSKQ*KNAMLC 347
           T +D+IDLEE+  + +   N M C
Sbjct: 25  TKYDNIDLEEIFSSKRLMDNYMNC 48


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 276 TSFDSIDLEELVHTSKQ*KNAMLC 347
           T +D+IDLEE+  + +   N M C
Sbjct: 25  TKYDNIDLEEIFSSKRLMDNYMNC 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,518
Number of Sequences: 2352
Number of extensions: 11767
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)