Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M17
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 85 9e-16
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 73 2e-12
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 62 7e-09
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 61 1e-08
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 60 2e-08
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 55 8e-07
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 49 5e-05
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 46 4e-04
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 40 0.019
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 40 0.034
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.18
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 33 2.9
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 33 3.8
UniRef50_Q97N10 Cluster: Distantly related to cell wall-associat... 32 5.1
UniRef50_Q7NBF8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q06147 Cluster: Sphingoid long chain base kinase 5; n=2... 32 5.1
UniRef50_A0Q086 Cluster: Putative uncharacterized protein; n=1; ... 32 6.7
UniRef50_A0EBY6 Cluster: Chromosome undetermined scaffold_89, wh... 31 8.9
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 84.6 bits (200), Expect = 9e-16
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = +3
Query: 42 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 221
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 222 YHQKMKVNLRNHYKNKKYKPLXFKSQE 302
+Q K NLR YK KKYKPL + ++
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK 87
Score = 54.8 bits (126), Expect = 8e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 411
R KKTRAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 84 RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 73.3 bits (172), Expect = 2e-12
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +3
Query: 42 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 221
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 222 YHQKMKVNLRNHYKNKKYKPLXFK 293
+Q K LR Y + KYKP+ +
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLR 84
Score = 36.3 bits (80), Expect = 0.31
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 411
R KKTRA+R+ LT HE +++ K+ K R +AVKA
Sbjct: 84 RLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 61.7 bits (143), Expect = 7e-09
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +3
Query: 42 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 221
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 222 YHQKMKVNLRNHYKNKKYKPLXFKSQ 299
Y+QK K+ LR YKNKK+KP + +
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKK 85
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +3
Query: 51 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 230
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 231 KMKVNLRNHYKNKKYKPLXFKSQE 302
K + NLR YK K PL ++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKK 160
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 60.5 bits (140), Expect = 2e-08
Identities = 37/118 (31%), Positives = 54/118 (45%)
Frame = +3
Query: 33 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 212
T+ KVK +L K + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 213 YIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSKDQDEERDQKEISLP 386
V + + LR YKNKKY PL + + + + + E++ +KEI P
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFP 178
Score = 48.4 bits (110), Expect = 7e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 408
R + TRA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 147 RPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 54.8 bits (126), Expect = 8e-07
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +3
Query: 48 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 227
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 228 QKMKVNLRNHYKNKKYKPLXFK 293
Q+ K R YK PL +
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLR 103
Score = 34.3 bits (75), Expect = 1.3
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 411
R K TRA RK LT + +KT KE ++ P R YA+ A
Sbjct: 103 RPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 51 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 230
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 231 KMKVNLRNHYKNKKYK 278
+ NL+ Y ++K +
Sbjct: 65 NERSNLKMFYADRKLR 80
Score = 36.7 bits (81), Expect = 0.24
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 408
R K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 88 RTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/86 (29%), Positives = 44/86 (51%)
Frame = +3
Query: 129 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDP 308
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PL + +
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 309 CYAQGSY*TRSKDQDEERDQKEISLP 386
+ ++K + +K ++ P
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFP 118
Score = 35.1 bits (77), Expect = 0.72
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 411
R K TRA R+ALT +AK T K +K FP R +A+ A
Sbjct: 87 RKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 40.3 bits (90), Expect = 0.019
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 411
R KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 61 RPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 39.5 bits (88), Expect = 0.034
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 30 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 209
VTV M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 210 VY 215
Y
Sbjct: 163 AY 164
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.18
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 132 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFK 293
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL K
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSK 64
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 396
R KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 6 RPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 32.7 bits (71), Expect = 3.8
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 292 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 402
R K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 83 RPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q97N10 Cluster: Distantly related to cell wall-associated
hydrolases, similar to yycO Bacillus subtilis; n=2;
Clostridium acetobutylicum|Rep: Distantly related to
cell wall-associated hydrolases, similar to yycO
Bacillus subtilis - Clostridium acetobutylicum
Length = 233
Score = 32.3 bits (70), Expect = 5.1
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 126 TNLRVAKVTGGVA-SKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 302
TN++ VT G+ ++ + ++ + I Y + K K + N YKNK K F S++
Sbjct: 22 TNVKAYAVTNGMTGNERNVLKQYQSNIDNTYNSFGDKKKTKVVNDYKNKVKKAQRFISRD 81
Query: 303 -DPCYAQGSY*TRS 341
D Y G Y TRS
Sbjct: 82 TDENY--GDYPTRS 93
>UniRef50_Q7NBF8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma gallisepticum|Rep: Putative uncharacterized
protein - Mycoplasma gallisepticum
Length = 1931
Score = 32.3 bits (70), Expect = 5.1
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 168 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSKD 347
K SKI ++R I Y Q+ ++ L +KN + + K+QE+ + Q + + +K
Sbjct: 1353 KSSKIALLRSKIYNTYKQQQQQKQILLEEKHKNSQLRKSLLKTQEE-LHQQKAQFSIAKK 1411
Query: 348 QDEE--RDQKEI 377
Q+E+ ++QK++
Sbjct: 1412 QEEKKLKNQKDL 1423
>UniRef50_Q06147 Cluster: Sphingoid long chain base kinase 5; n=2;
Saccharomyces cerevisiae|Rep: Sphingoid long chain base
kinase 5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 687
Score = 32.3 bits (70), Expect = 5.1
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 192 RKAIARVYIVYHQKMKVNLRNHY---KNK---KYKPLXFKSQEDPC---YAQGSY*TRSK 344
+K +Y+ Y K K L+NHY KNK +++ + + C + Y T ++
Sbjct: 453 KKYPCEIYVKYAAKSKNELKNHYLEHKNKGSLEFQHITMNKDNEDCDNYNYENEYETENE 512
Query: 345 DQDEERD 365
D+DE+ D
Sbjct: 513 DEDEDAD 519
>UniRef50_A0Q086 Cluster: Putative uncharacterized protein; n=1;
Clostridium novyi NT|Rep: Putative uncharacterized
protein - Clostridium novyi (strain NT)
Length = 138
Score = 31.9 bits (69), Expect = 6.7
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +3
Query: 183 RVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPC 311
+++ K+ + +YI+ KMK NL+N + KY+ + K +E+PC
Sbjct: 30 KLLNKSKSNLYIMTSSKMK-NLKNKNYDIKYEKIIGKIKENPC 71
>UniRef50_A0EBY6 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 822
Score = 31.5 bits (68), Expect = 8.9
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +3
Query: 168 KLSKIRV-VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSK 344
+L +++V +++ ++ + Y++K+K + N Y + + L FK DP Y + + T ++
Sbjct: 235 ELKQLKVKCKESESKATMYYNEKLKKDKLNQYLKNQIESLKFK---DPEYKKQNKITENE 291
Query: 345 DQ-DEERDQKEISLPT 389
Q ++ DQK++ + T
Sbjct: 292 QQLKQDIDQKQVQIDT 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,458,888
Number of Sequences: 1657284
Number of extensions: 4512579
Number of successful extensions: 13325
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13315
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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