Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M14
(613 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 4e-73
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 270 8e-73
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 269 1e-72
SB_56| Best HMM Match : Actin (HMM E-Value=0) 269 1e-72
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 269 1e-72
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 9e-36
SB_54| Best HMM Match : Actin (HMM E-Value=0) 130 1e-30
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 116 2e-26
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 9e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 87 1e-17
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 86 2e-17
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 39 0.003
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 37 0.011
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 34 0.079
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.079
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 33 0.18
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 31 0.97
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 31 0.97
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 30 1.3
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.3
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 30 1.7
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 28 6.9
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 6.9
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 27 9.1
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 270 bits (663), Expect = 4e-73
Identities = 131/167 (78%), Positives = 137/167 (82%)
Frame = +2
Query: 110 ATKKLPRLVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQ 289
A + LV+DNGSG + P P + VMVGMGQKDSYVGDEAQ
Sbjct: 2 ADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQ 60
Query: 290 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 469
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 470 TXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
T IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 270 bits (661), Expect = 8e-73
Identities = 130/164 (79%), Positives = 137/164 (83%)
Frame = +2
Query: 119 KLPRLVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKR 298
++ LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKR
Sbjct: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKR 63
Query: 299 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXI 478
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT I
Sbjct: 64 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 123
Query: 479 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
MFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY
Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 269 bits (660), Expect = 1e-72
Identities = 130/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 166
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 269 bits (660), Expect = 1e-72
Identities = 130/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 166
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 269 bits (660), Expect = 1e-72
Identities = 130/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 167
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 146 bits (355), Expect = 9e-36
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEG-PAIRXVM-VG-MGQKDSYVGDEAQSKRG 301
+V DNG+G+V+ P S G P IR VG + KD VGDEA R
Sbjct: 9 IVCDNGTGFVKCGYAGSNFPAHIFP--SMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 302 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTXI 478
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM +
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 479 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+Y
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVY 170
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 130 bits (313), Expect = 1e-30
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +2
Query: 362 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLY 541
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 542 ASGRTTGIVLDSGDGVSHTVPIY 610
ASGRTTG V D GDGVSHTVP+Y
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVY 2211
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 159 CKAGFAGDDAPRAVFPSXRGK 221
CKAG + D++PR VFP+ G+
Sbjct: 2106 CKAGLSTDESPRVVFPAIVGR 2126
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 116 bits (278), Expect = 2e-26
Identities = 49/67 (73%), Positives = 61/67 (91%)
Frame = +2
Query: 410 EHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 589
+HPVLLTEAPLNP+ NREK + FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 590 SHTVPIY 610
SH+VPIY
Sbjct: 186 SHSVPIY 192
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 107 bits (256), Expect = 9e-24
Identities = 54/84 (64%), Positives = 57/84 (67%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LV+DNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTF 382
LKYPIEHGIVTNWDDMEKI TF
Sbjct: 67 LKYPIEHGIVTNWDDMEKIMFETF 90
Score = 94.7 bits (225), Expect = 5e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +2
Query: 455 NREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
N + M IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY 129
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/97 (37%), Positives = 63/97 (64%)
Frame = +2
Query: 320 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNT 499
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T +MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 500 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
PA ++ +VL+ +A+GR+ G+V+DSG + VP++
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVH 99
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/45 (86%), Positives = 42/45 (93%)
Frame = +2
Query: 476 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIY
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIY 45
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 248 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 427
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 557 TGIVLDSGDGVSHTVPI 607
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 365 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYA 544
I H F + L+V P +H V++T +E++ I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 545 SGRTTGIV 568
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.1 bits (82), Expect = 0.011
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Frame = +2
Query: 269 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 442
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 443 NPKANREKMTXIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 604
+ M I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 605 IY 610
++
Sbjct: 373 VF 374
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 156 MCKAGFAGDDAPRAVFPSXRGK 221
M K GFAGDDAP+ VFP G+
Sbjct: 1367 MWKVGFAGDDAPKGVFPPIVGR 1388
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.079
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 489 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 602
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 504 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 602
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPI 607
++ T A+ + S RT TG V+DSGDGV+H +P+
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPV 78
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
PP P P + TRP VP +T PTP P T
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPT 955
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSC 569
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 463
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 521 QAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
Q LSLYASG T G+ L SG + IY
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIY 796
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 30.7 bits (66), Expect = 0.97
Identities = 19/75 (25%), Positives = 26/75 (34%)
Frame = +3
Query: 375 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 554
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 555 PPVSCWTPATVSPTP 599
P + TP T + TP
Sbjct: 145 PTTAATTPTTAATTP 159
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +3
Query: 378 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 557
PST S P + S C+ HST ++PS P + CT P P
Sbjct: 27 PSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCT-HSTPSAPSTPSTPSTPCT-PSTP 84
Query: 558 --PVSCWTPATVSPTPCPST 611
P + TP+T S PST
Sbjct: 85 STPSTPSTPSTPSTPSAPST 104
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 452 ANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 568
A +E++ I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 516 PSKPCSRCTRPVVPP 560
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 480 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 602
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 504 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 602
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 436 SPQPQGQQREDDPXHVRNIQHARHVRRHPSR 528
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 504 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 602
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 504 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 608
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Frame = -2
Query: 597 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMXWVIFSLLALG 445
VWE T P + T+P + D Y S +W+ VL N +++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 444 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 280
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 440 LNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 568
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 206 GEHGARSIISCETGLAH 156
GE+G+ SI+S ETGLAH
Sbjct: 9 GENGSGSIVSGETGLAH 25
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 510 TSPSKPCSRCTRPVVPPVSCWTPATVSPTP 599
+SP KP T+PVVP P+ + P P
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKP 1540
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 596
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 1/79 (1%)
Frame = +3
Query: 378 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 557
P+T S +P + T + + T +P+KP P P
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP 115
Query: 558 PVSCWTPATVSP-TPCPST 611
+ TP +P TP P+T
Sbjct: 116 TPTAHTPTKPTPKTPTPTT 134
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 498 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
+PP T+PSK T P+ P++ TP T T P+T
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKAT-TPTT 415
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 599
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 483 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
S+ ST+ P T KP + RP+ P + P + P P T
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRT 294
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 591 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMXWVIFSLLALG--LRGASVSRT 418
ETPSP + P PDA TAW + L S V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 417 G 415
G
Sbjct: 147 G 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,673,675
Number of Sequences: 59808
Number of extensions: 515740
Number of successful extensions: 3730
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3696
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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