Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M14
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 271 3e-73
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 270 4e-73
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 270 4e-73
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 270 4e-73
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 270 4e-73
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 270 4e-73
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 270 4e-73
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 269 9e-73
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 266 6e-72
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 264 3e-71
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 261 2e-70
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 182 1e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 147 5e-36
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 134 5e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 103 1e-22
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 103 1e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 103 1e-22
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 7e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 5e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 35 0.040
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 35 0.040
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 35 0.040
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 35 0.053
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.49
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.49
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.65
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 31 0.86
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 30 1.1
Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 29 2.6
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 3.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 3.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.5
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 28 4.6
AF100663-1|AAC68979.2| 173|Caenorhabditis elegans Hypothetical ... 28 4.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 6.0
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 6.0
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 6.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 6.0
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 271 bits (664), Expect = 3e-73
Identities = 132/160 (82%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 270 bits (663), Expect = 4e-73
Identities = 131/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY 167
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 269 bits (660), Expect = 9e-73
Identities = 130/160 (81%), Positives = 135/160 (84%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
L++DNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 490
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 491 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY 167
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 266 bits (653), Expect = 6e-72
Identities = 128/165 (77%), Positives = 137/165 (83%)
Frame = +2
Query: 116 KKLPRLVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSK 295
+++ LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSK
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 296 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTX 475
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 476 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIY
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIY 166
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 264 bits (647), Expect = 3e-71
Identities = 122/129 (94%), Positives = 125/129 (96%)
Frame = +2
Query: 224 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 403
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 404 PEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 583
PEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGD
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 144
Query: 584 GVSHTVPIY 610
GV+HTVPIY
Sbjct: 145 GVTHTVPIY 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 162 KAGFAGDDAPRAVFPSXRGKAPPSG 236
+AGFAGDDAPRAVFPS G+ G
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 261 bits (640), Expect = 2e-70
Identities = 120/123 (97%), Positives = 122/123 (99%)
Frame = +2
Query: 242 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 421
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 422 LLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 601
LLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 602 PIY 610
PIY
Sbjct: 121 PIY 123
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 182 bits (444), Expect = 1e-46
Identities = 86/161 (53%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEG-PAIRXVMVGMGQKDSYVGDEAQSKRGIL 307
+V+DNGSG ++ V ++ G P VM G D ++G +A+S RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPK--VRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLF 68
Query: 308 TLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTXIMF 484
+++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ I F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 485 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 607
ETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPI 169
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 147 bits (357), Expect = 5e-36
Identities = 78/164 (47%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEG-PAIRXVM-VGMGQ-KDSYVGDEAQSKRG 301
+VVDNG+G+V+ P S G P +R VG + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFP--SMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQ 66
Query: 302 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTXI 478
+L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM +
Sbjct: 67 MLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQV 126
Query: 479 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+Y
Sbjct: 127 MFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVY 170
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 134 bits (324), Expect = 5e-32
Identities = 76/183 (41%), Positives = 102/183 (55%), Gaps = 20/183 (10%)
Frame = +2
Query: 119 KLPRLVVDNGSGYVQGXXXXXXXXXXXVP--------LXSWEGPAIRX---VMVGMGQKD 265
+LP V+DNG+GY + +P + S A+R V G+ D
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLD 64
Query: 266 SYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 442
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PL
Sbjct: 65 FFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Query: 443 NPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHT 598
N NRE IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H
Sbjct: 125 NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184
Query: 599 VPI 607
+P+
Sbjct: 185 IPV 187
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 1e-22
Identities = 53/79 (67%), Positives = 55/79 (69%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKI 367
LKYPIEHGIVTNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 1e-22
Identities = 53/79 (67%), Positives = 55/79 (69%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKI 367
LKYPIEHGIVTNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 103 bits (246), Expect = 1e-22
Identities = 53/79 (67%), Positives = 55/79 (69%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDMEKI 367
LKYPIEHGIVTNWDDMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 7e-21
Identities = 50/76 (65%), Positives = 52/76 (68%)
Frame = +2
Query: 131 LVVDNGSGYVQGXXXXXXXXXXXVPLXSWEGPAIRXVMVGMGQKDSYVGDEAQSKRGILT 310
LVVDNGSG + P P + VMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 311 LKYPIEHGIVTNWDDM 358
LKYPIEHGIVTNWDDM
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 94.7 bits (225), Expect = 5e-20
Identities = 42/96 (43%), Positives = 63/96 (65%)
Frame = +2
Query: 323 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTP 502
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 503 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 610
A Y++ VLS +A GRT G+++DSG + VP++
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVF 189
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 257 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 430
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 431 EAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 580
+ A + + I+F+ F ++ + L S + +V+DSG
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 257 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 430
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 431 EAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 580
+ A + + I+F+ F ++ + L S + +V+DSG
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 492 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
ST P T+P P S T P VPPV+ TP T + T +T
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 697
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 492 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
ST P T+P P S T P VPPV+ TP T + T +T
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 753
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 492 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
ST P T+P P S T P VPPV+ TP T + T +T
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTT 576
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.053
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 389 ELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 568
EL+V P ++ VLL+ P ++ I E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 569 LDSGDGVSHTVPI 607
+D G+ V + VP+
Sbjct: 326 VDIGERV-NIVPV 337
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 588 TPSPESSTIPVVRPDAYSESTAWMATYMAGVL 493
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 486 KHSTRPPCTSPS-----KPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
K ST PP TS S KP + T P P S T T +P P ST
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTST 625
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Frame = +3
Query: 486 KHSTRPPCTSPS-----KPCSRCTRPVVPPVSCWTPATVSPTPCPST 611
K ST PP TS S KP + T P P S T T +P P ST
Sbjct: 579 KVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTST 625
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.65
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 275 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 454
G + K TL + E + + D + K W T + L + + + PL+ K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 455 NREKMTXIMF-ETFNTPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 607
K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 30.7 bits (66), Expect = 0.86
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 510 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
TSP P + P +PP + T T + PCP
Sbjct: 122 TSPPAPVDQKPPPCIPPTTTTTTTTTTRPPCP 153
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 504 PCTSPSK-PCSRCTRPVVPPVSCWTPATVSPTPCPST 611
PC + PC+ C +P P +C T V TP P T
Sbjct: 182 PCPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPCT 218
>Z77658-2|CAB01156.1| 457|Caenorhabditis elegans Hypothetical
protein F14D7.2 protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 492 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 599
ST+PP T ++ RP +PP+ T SPTP
Sbjct: 109 STKPPVTCRTEFTELEARPAIPPLGNLEGLTDSPTP 144
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 507 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
C +P PC T P PP+ C + P P
Sbjct: 645 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 677
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 507 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
C +P PC T P PP+ C + P P
Sbjct: 290 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 322
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 507 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
C +P PC T P PP+ C + P P
Sbjct: 242 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 274
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 507 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
C +P PC T P PP+ C + P P
Sbjct: 970 CCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAP 1002
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 394 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 519
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 394 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 519
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 394 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 519
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 394 ACRPRGTPSPAH*GSPQPQGQQREDDPXHVRNIQ---HARHVRRH 519
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 604 GHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 500
GH G G H GG G HG G HGG
Sbjct: 175 GHHGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGG 209
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
PP SPS P R RP PA + TP P
Sbjct: 510 PPSPSPSTPGRRGRRPRTLSTMSMEPAAAAVTPAP 544
>AF100663-1|AAC68979.2| 173|Caenorhabditis elegans Hypothetical
protein K08B4.2 protein.
Length = 173
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 13 IGILFLTVSSHCRAFNFHLVTPTSY*FH*FKMCDEEV 123
+ ILFLTVS + AF F ++ T F + DEEV
Sbjct: 6 VAILFLTVSQYGSAFEFQVLDYTPVEFSFNQDIDEEV 42
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/77 (25%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Frame = +3
Query: 390 SCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPP--CTSPSKPCSRCTRPVVP-- 557
+C PR + SC C S P C P P + C P P
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPT 128
Query: 558 --PVSCWTPATVSPTPC 602
P+ C A V PC
Sbjct: 129 PSPLVCCKQAPVPENPC 145
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 480 CSKHSTRPP---CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 608
CS + PP C PS PV P P TV+PT P+
Sbjct: 388 CSPGAKSPPDQSCPKPSPTDPTPVPPVAPTPPSVCPTTVAPTTTPA 433
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +3
Query: 480 CSKHSTRPP---CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 608
CS + PP C PS PV P P TV+PT P+
Sbjct: 391 CSPGAKSPPDQSCPKPSPTDPTPVPPVAPTPPSVCPTTVAPTTTPA 436
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 501 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 605
P C P PC P+ PP C P P P P
Sbjct: 36 PMCAPPPLPCP--PPPICPPQFCPPPPMCPPPPPP 68
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 349 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 239
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,279,524
Number of Sequences: 27780
Number of extensions: 345347
Number of successful extensions: 1576
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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