Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M12
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...   147   2e-37
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   1.7  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   1.7  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   1.7  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   1.7  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   1.7  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    25   1.7  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.1  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   9.1  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score =  147 bits (356), Expect = 2e-37
 Identities = 68/78 (87%), Positives = 75/78 (96%)
 Frame = +2

Query: 302 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 481
           IMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ESRIHRLARYYK K+
Sbjct: 74  IMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRLARYYKIKA 133

Query: 482 VLPPNWKYESSTASALVA 535
           VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151



 Score =  137 bits (332), Expect = 2e-34
 Identities = 62/73 (84%), Positives = 70/73 (95%)
 Frame = +1

Query: 82  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 261
           MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60

Query: 262 AQVRFVTGKKILR 300
           AQVRFV G K+LR
Sbjct: 61  AQVRFVNGNKVLR 73


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 186 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 299
           T    W + + + T     +  TWS P+    W   PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 352 PDQESCCNEETLG 390
           P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +3

Query: 135 PPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRN 281
           PP  P  ++ID   C   +L+ ++    ++T     +   WS  S   N
Sbjct: 590 PPDVPNRIDIDVTGCSAVSLRLYEPLEGAITTKFKVQ---WSSRSDFSN 635


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/55 (16%), Positives = 29/55 (52%)
 Frame = +1

Query: 91  MHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 255
           ++  GK     ++ +   +   + + A  +++ +YK G+ G+T + + ++  +S+
Sbjct: 33  LNGTGKSNILDSICFVLGISNLVHVRATSLQDLVYKSGQAGITKATVTLIFDNSN 87


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 121  TGRYPYQERAYDPCLRLF 68
            TG Y Y+ R YDP +  F
Sbjct: 2679 TGLYNYRARLYDPDIGRF 2696


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 121  TGRYPYQERAYDPCLRLF 68
            TG Y Y+ R YDP +  F
Sbjct: 2689 TGLYNYRARLYDPDIGRF 2706


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 157 LKLTADDVKEQIYKL 201
           LKL ADDVK Q+  L
Sbjct: 95  LKLAADDVKGQVESL 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,858
Number of Sequences: 2352
Number of extensions: 10564
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)