Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M10
(649 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondria... 179 2e-45
At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative / m... 165 3e-41
At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / i... 98 4e-21
At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron supero... 91 6e-19
At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast ... 84 9e-17
At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast ... 84 9e-17
At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast ... 84 9e-17
At1g11170.2 68414.m01279 expressed protein contains Pfam profile... 30 1.5
At1g11170.1 68414.m01280 expressed protein contains Pfam profile... 30 1.5
At1g61240.2 68414.m06901 expressed protein contains Pfam profile... 29 2.0
At1g61240.1 68414.m06900 expressed protein contains Pfam profile... 29 2.0
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 29 3.5
At1g11620.1 68414.m01334 F-box family protein contains F-box dom... 29 3.5
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 29 3.5
At1g08040.1 68414.m00878 expressed protein contains Pfam profile... 29 3.5
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 28 4.7
At2g37890.1 68415.m04651 mitochondrial substrate carrier family ... 28 4.7
At1g32950.1 68414.m04058 subtilase family protein contains simil... 28 4.7
At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SD... 28 6.1
>At3g10920.1 68416.m01317 superoxide dismutase [Mn], mitochondrial
(SODA) / manganese superoxide dismutase (MSD1) identical
to manganese superoxide dismutase [Arabidopsis thaliana]
gi|3273751|gb|AAC24832
Length = 231
Score = 179 bits (435), Expect = 2e-45
Identities = 85/164 (51%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Frame = +3
Query: 123 LIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQA 302
L+R+ G Q TLP+LPY+Y ALEP IS EIM +HH KHH Y+ N N A E+L QA
Sbjct: 22 LLRIRGI--QTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVN 79
Query: 303 KGDIDTIINLAPALKFNGGGHINHSIFWHNLSPN---GGK-PSDVLTKAVEKDFGSWDNI 470
KGD T++ L A+KFNGGGH+NHSIFW NL+P+ GG+ P L A++ FGS + +
Sbjct: 80 KGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGL 139
Query: 471 KNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTG 602
++S AVQGSGW WLG +K++KKL + T NQDPL G
Sbjct: 140 VKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGG 183
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 604 LVPLFGIDVWEHAYY 648
LVPL GIDVWEHAYY
Sbjct: 185 LVPLVGIDVWEHAYY 199
>At3g56350.1 68416.m06266 superoxide dismutase [Mn], putative /
manganese superoxide dismutase, putative similar to
manganese superoxide dismutase (MSD1) [Arabidopsis
thaliana] gi|3273751|gb|AAC24832
Length = 241
Score = 165 bits (400), Expect = 3e-41
Identities = 74/152 (48%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Frame = +3
Query: 144 SRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 323
S + +LP+LPY Y+ALEP IS EIM LHH KHH TY+ N A L A A GD ++
Sbjct: 32 SMKTASLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSAMADGDHSSV 91
Query: 324 INLAPALKFNGGGHINHSIFWHNLSP---NGGK-PSDVLTKAVEKDFGSWDNIKNQLSTA 491
+ L +KFNGGGH+NH+IFW NL+P GGK P D L A++ FGS + + +++
Sbjct: 92 VKLQSLIKFNGGGHVNHAIFWKNLAPVHEGGGKPPHDPLASAIDAHFGSLEGLIQKMNAE 151
Query: 492 SVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 587
AVQGSGW W G ++++K+L + T NQDPL
Sbjct: 152 GAAVQGSGWVWFGLDRELKRLVVETTANQDPL 183
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 604 LVPLFGIDVWEHAYY 648
LVPL GIDVWEHAYY
Sbjct: 190 LVPLIGIDVWEHAYY 204
>At5g51100.1 68418.m06335 superoxide dismutase [Fe], putative / iron
superoxide dismutase, putative similar to Fe-superoxide
dismutase precursor [Medicago sativa]
gi|16974682|gb|AAL32441
Length = 305
Score = 98.3 bits (234), Expect = 4e-21
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Frame = +3
Query: 108 QRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKL 287
+R+G+ + V+G L PY +ALEP +SRE + H KHH TY+ NLN ++ L
Sbjct: 37 RRLGTKVAVSGVITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLN--KQIL 94
Query: 288 AQAQAKGDIDTII-------NLAPALKFNGGGHINHSIFWHNLSP-NGGKPSDVLTKAVE 443
++ ++ N+ PA N NH FW ++ P GGKP+ L + +E
Sbjct: 95 GTDLDALSLEEVVLLSYNKGNMLPAFN-NAAQAWNHEFFWESIQPGGGGKPTGELLRLIE 153
Query: 444 KDFGSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 584
+DFGS++ + +A+ + GSGW WL Y + +L +A N P
Sbjct: 154 RDFGSFEEFLERFKSAAASNFGSGWTWLAY--KANRLDVANAVNPLP 198
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 610 PLFGIDVWEHAYY 648
PL ID WEHAYY
Sbjct: 223 PLLTIDTWEHAYY 235
>At5g23310.1 68418.m02727 superoxide dismutase [Fe] / iron
superoxide dismutase 3 (FSD3) identical to iron
superoxide dismutase 3 [Arabidopsis thaliana]
gi|3273757|gb|AAC24834
Length = 263
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Frame = +3
Query: 174 PYEYNALEPVISREIMSLHHSKHHATYINNLNVA---EEKLAQAQAKGDIDTIINLA-PA 341
PY +ALEP +SR + +H KHH Y++NLN +++L + I N P
Sbjct: 56 PYPLDALEPYMSRRTLEVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPL 115
Query: 342 LKFNGGGHI-NHSIFWHNLSPNGGK-PSDVLTKAVEKDFGSWDNIKNQLSTASVAVQGSG 515
+FN + NH FW ++ P GG P + + ++KDFGS+ N + + + A++ GSG
Sbjct: 116 PEFNNAAQVYNHDFFWESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSG 175
Query: 516 WGWLGYNKQMKKLQIATCQN 575
W WL ++ ++L++ N
Sbjct: 176 WVWLVLKREERRLEVVKTSN 195
Score = 28.7 bits (61), Expect = 3.5
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 607 VPLFGIDVWEHAYY 648
+P+ +DVWEH+YY
Sbjct: 205 IPIICVDVWEHSYY 218
>At4g25100.3 68417.m03608 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 83.8 bits (198), Expect = 9e-17
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 135 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 308
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 309 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNIKNQ 479
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 480 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 587
+ A+ G+GW WL Y+ + K+ + T +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 598 LGLVPLFGIDVWEHAYY 648
LG PL IDVWEHAYY
Sbjct: 160 LGSFPLLTIDVWEHAYY 176
>At4g25100.2 68417.m03607 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 83.8 bits (198), Expect = 9e-17
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 135 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 308
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 309 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNIKNQ 479
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 480 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 587
+ A+ G+GW WL Y+ + K+ + T +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 598 LGLVPLFGIDVWEHAYY 648
LG PL IDVWEHAYY
Sbjct: 160 LGSFPLLTIDVWEHAYY 176
>At4g25100.1 68417.m03606 superoxide dismutase [Fe], chloroplast
(SODB) / iron superoxide dismutase (FSD1) identical to
Fe-superoxide dismutase [Arabidopsis thaliana]
gi|166700|gb|AAA32791; supported by cDNA, Ceres:32935
Length = 212
Score = 83.8 bits (198), Expect = 9e-17
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 135 AGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLN--VAEEKLAQAQAKG 308
+ A + L P+ +ALEP +S++ + H KHH Y++NL V +L +
Sbjct: 4 SSAVTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTELEGKPLEH 63
Query: 309 DIDTIINLAPALK-FNGGGHI-NHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNIKNQ 479
I + N L FN NH FW ++ P GG KPS L +E+DF S++ +
Sbjct: 64 IIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEE 123
Query: 480 LSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPL 587
+ A+ G+GW WL Y+ + K+ + T +PL
Sbjct: 124 FNAAAATQFGAGWAWLAYSNEKLKV-VKTPNAVNPL 158
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 598 LGLVPLFGIDVWEHAYY 648
LG PL IDVWEHAYY
Sbjct: 160 LGSFPLLTIDVWEHAYY 176
>At1g11170.2 68414.m01279 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 335
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 350 QWW---WSHQPLDLLAQPVTKWWQA 415
+WW WS + + ++AQ TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181
>At1g11170.1 68414.m01280 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 438
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +2
Query: 350 QWW---WSHQPLDLLAQPVTKWWQA 415
+WW WS + + ++AQ TKWW A
Sbjct: 157 KWWDLEWSSKSIHIVAQNQTKWWFA 181
>At1g61240.2 68414.m06901 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 425
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +2
Query: 350 QWW---WSHQPLDLLAQPVTKWWQA 415
QWW WS + + ++A TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178
>At1g61240.1 68414.m06900 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 425
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = +2
Query: 350 QWW---WSHQPLDLLAQPVTKWWQA 415
QWW WS + + ++A TKWW A
Sbjct: 154 QWWDLEWSSKAIHIVAHNQTKWWFA 178
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 586 RGSWFWHVAICNFFICLL*PSQPQP 512
+G+WF+H ICNF + L Q P
Sbjct: 241 QGNWFYHCPICNFCLDLSCSQQSVP 265
>At1g11620.1 68414.m01334 F-box family protein contains F-box domain
Pfam:PF00646
Length = 363
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 417 SDVLTKAVEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKL 554
SD V+ +FG +D L +SV ++G+ + WLGYNK +L
Sbjct: 181 SDSWKVVVDTNFGGFDG----LPLSSVCLRGTPY-WLGYNKSGNEL 221
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 479 LILYVIPGSKVFLNGFGENIRRLATIW*QVVPKDRVVDVTTTIEFQGWCKVDNGVDITFS 300
L ++ GS ++ GF R TI +V KD+VV + GW + D +++ S
Sbjct: 388 LQIFSSSGSSIWCIGFQRMSHRRITILGDLVLKDKVVVYDLVRQRIGWAEYDCSLEVNVS 447
>At1g08040.1 68414.m00878 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 382
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 320 HYQPCTSLEIQWWWSHQPLDLLAQPVTKWWQA 415
HY T+ Q+ WS + + A+ TKWW A
Sbjct: 155 HYDGRTTEWDQFEWSKNAIHISAKKQTKWWYA 186
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 138 GASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDID 317
G ++H E ++ EPV+ +E + H K A+ + N N + Q +K D +
Sbjct: 27 GGQEKEHVPVEKSFDSEEREPVVLKEEKPVKHEK-EASILGNKNQMDTGDVQEVSKNDFE 85
Query: 318 TIIN 329
++
Sbjct: 86 ATLD 89
>At2g37890.1 68415.m04651 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 337
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 303 KGDIDTIINLAPALKFNGGGHINHSIFWHNLSPN 404
KG T++ + P+L N + + +FWH+ PN
Sbjct: 206 KGLGATLLGVGPSLAINFAAYESMKLFWHSHRPN 239
>At1g32950.1 68414.m04058 subtilase family protein contains
similarity to SBT1 GI:1771160 from [Lycopersicon
esculentum]
Length = 773
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 454 PKSFSTALVRTSEGLPPFGDRLCQKIEWLM*PPPLNFKAG 335
P +F +A+V T+ PFG+++ + L P P ++ G
Sbjct: 573 PAAFRSAIVTTAWRTDPFGEQIAAESSSLKVPDPFDYGGG 612
>At4g05530.1 68417.m00842 short-chain dehydrogenase/reductase (SDR)
family protein similar to peroxisomal short-chain
alcohol dehydrogenase GI:4105190 from [Homo sapiens]
Length = 254
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 552 ISSFVCCSQANPSLSPVLPQKLSTVDSLCYPRIQS 448
I VC + ANPS P+L K + +D L ++S
Sbjct: 89 IDIVVCNAAANPSTDPILSSKEAVLDKLWEINVKS 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,686
Number of Sequences: 28952
Number of extensions: 324401
Number of successful extensions: 983
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -