Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M09
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 82 8e-15
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 78 1e-13
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 66 3e-10
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 63 3e-09
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 56 5e-07
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 54 2e-06
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 52 1e-05
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 52 1e-05
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 51 2e-05
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 50 2e-05
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 50 3e-05
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 49 7e-05
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 49 7e-05
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 49 7e-05
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 48 1e-04
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 48 1e-04
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 48 1e-04
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 48 1e-04
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 48 2e-04
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 46 4e-04
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 46 4e-04
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 46 4e-04
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 46 4e-04
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 46 4e-04
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 46 7e-04
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 46 7e-04
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 46 7e-04
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 45 9e-04
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 44 0.002
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 44 0.002
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 44 0.002
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 44 0.002
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 44 0.002
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 44 0.003
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 43 0.004
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 43 0.004
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 43 0.005
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 42 0.011
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 42 0.011
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 41 0.015
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 41 0.019
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 38 0.14
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 37 0.31
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 34 1.7
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 34 1.7
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 34 1.7
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 33 2.9
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 33 5.1
UniRef50_UPI0000DB7EB7 Cluster: PREDICTED: similar to CG5989-PA;... 32 8.9
UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein At5... 32 8.9
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 81.8 bits (193), Expect = 8e-15
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 206
MK+ LC++SGYKIYPGHG+ +VDGK F FLN+KCE+A L +RNPR N + + +
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 207 KGPRGRTSKE 236
KG SK+
Sbjct: 61 KGQSEEVSKK 70
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
++ WTVLYRRK KKGQ EE I GASL++I+AKRN KPEV
Sbjct: 48 QINWTVLYRRKHKKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 206
MK+ LC++SGYKIYPGHG+ + DGK F FLN+KCE+A L +RNPR N + + +
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 207 KGPRGRTSKE 236
KG K+
Sbjct: 61 KGQSEEIQKK 70
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
++ WTVLYRRK KKGQ EE I GASL+DIMAKRN KPEV
Sbjct: 48 QINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 66.5 bits (155), Expect = 3e-10
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
KVTWTVLYRRK +KG EEE IVGASL++I+AKRNMKPEV
Sbjct: 7 KVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 206
MK+ C YSGYKI+PGHGK +V+ DGK FL+ K +RRNPR + + +
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 207 KGPRGR 224
KG G+
Sbjct: 61 KGTHGQ 66
Score = 35.1 bits (77), Expect = 0.96
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 172 VTWTVLYRRKFKKG---QEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 312
+ WTVLYR K KKG QE+ + G SL I+AKRN
Sbjct: 49 IRWTVLYRIKNKKGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRN 98
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 56.0 bits (129), Expect = 5e-07
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
+VTWTVLYR K KKG +EE + GASL +I+AKRN KPEV
Sbjct: 28 EVTWTVLYRCKHKKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEV 80
Score = 38.7 bits (86), Expect = 0.078
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 105 KTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 236
K F FLN +CE A LMRRNPR + + +KG + SK+
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKK 50
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + G IYPGHG V+ D K F F SKC + M+RNPR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPR 47
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 51.6 bits (118), Expect = 1e-05
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C Y IYPGHG T V+ D K F F SKC M+ NPR
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPR 52
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
C++ GY+I PG GK +V+ DG F +SKCE ++ M RNPR
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPR 48
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
MK LC YS +KIYP G V+ D K F F+N+K E+ + NPR
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPR 47
Score = 35.5 bits (78), Expect = 0.72
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 172 VTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
+ W+++YRR +K + IVGASL I KR KPEV
Sbjct: 49 IRWSMVYRRIYKNTTTDVSAKKKARKTKKVERNIVGASLEVIQQKRAQKPEV 100
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 50.4 bits (115), Expect = 2e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 164
+K LC+YS Y+IYPG G+ V DG+ TFLN KC + + P
Sbjct: 8 IKTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRP 53
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 45 AYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
++SG KIYPG GK ++ D K F F N K E+ L R+NPR
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPR 47
Score = 45.6 bits (103), Expect = 7e-04
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPE 324
K++WT LYRR KKG EE IVGASL I +R+ +PE
Sbjct: 48 KISWTTLYRRMHKKGISEEVAKKRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 48.8 bits (111), Expect = 7e-05
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M++ C + +YPGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPR 47
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 48.8 bits (111), Expect = 7e-05
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + KIYPGHG V+ D K F F KC A ++NPR
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPR 47
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
MK+ + ++SG KIYPG G V+ D K F F NSK + R+NPR
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPR 47
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEV 327
++ WTVL+R+ KKG EE I GASL I +R++KPEV
Sbjct: 48 RIAWTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + YPGHG V+ D K F F SKC A RRNPR
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M++ C + YPGHG V+ D K F F SKC A RRNPR
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M++ C + IYPGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 137
+K LC +SG KIYPG G ++ D + F FLNSKC+
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCK 39
Score = 36.3 bits (80), Expect = 0.41
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXX-XXXXIVGASLSDIMAKRNMKPEV 327
K+ WT +YR++ KK +E IVGA+L I KR KPEV
Sbjct: 50 KLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEV 103
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 30 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMR 155
K LC +S YK+YPG G V+ DG+TF FL+ K + H +
Sbjct: 4 KTELCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQK 45
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 172 VTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRN 312
+TWT ++RRK +KG + +VG SL++I RN
Sbjct: 51 LTWTPMWRRKNRKGAYAKAARVRTKRTTRKMKAVVGMSLAEINRIRN 97
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 46.4 bits (105), Expect = 4e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + IYPGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
++I C++ G I+PGHG V+ D K F F SKC + ++NPR
Sbjct: 2 VRIEKCSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPR 48
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 46.4 bits (105), Expect = 4e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEA 140
+K LC++S ++IYPGHG+ V DG+ F +LN K A
Sbjct: 3 IKTDLCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRA 40
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 46.4 bits (105), Expect = 4e-04
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + IYPGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + +YPGHG V+ D K F F SKC ++RNPR
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPR 47
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 45.6 bits (103), Expect = 7e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 21 VKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
+ +K +CA+SG+KI G+ V++D K+FTF+N K L + NPR
Sbjct: 1 MSIKTQVCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPR 49
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 45.6 bits (103), Expect = 7e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M++ C + +YP G T V+ D K+F F SKC A M+R PR
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPR 47
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 45.6 bits (103), Expect = 7e-04
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPR 167
M+ +C++ GY I PG GK V+ DG+ F F + KCE L ++R PR
Sbjct: 1 MEKRVCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPR 48
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 45.2 bits (102), Expect = 9e-04
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M++ C + +YPGHG V+ D K F F +KC ++NPR
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPR 47
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C Y IYPGHG ++ D + F F SKC + NPR
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPR 47
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNP 164
C ++ Y++YPG GK V DGK + F+N K A H + P
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKP 57
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + IYPGHG V+ D K F F SKC + NPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPR 47
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + YPG G T V+ D K F F SKC ++RNPR
Sbjct: 1 MRIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPR 47
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
C+YSG KI PG+GK M + D FLN K +L + NPR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPR 48
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C IYPGHG V+ D K F F SKC + NPR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPR 47
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M I C IYPGHG V+ D K F F SKC + NPR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPR 47
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 30 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
+I C++ +YPG G V+ D + F F SKC M+RNPR
Sbjct: 3 RIEHCSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPR 48
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + YP G T V+ D +TF F SKC M+R PR
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPR 47
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + IYPGHG V+ D F F S+C ++NPR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPR 47
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 41.5 bits (93), Expect = 0.011
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRR 158
+K C++S Y+IYPG G+ + DGK + +L+SK + L ++
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKK 51
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 41.5 bits (93), Expect = 0.011
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRR 158
+K C++S Y+IYPG G+ + DGK + +L+SK + L ++
Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKK 51
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 41.1 bits (92), Expect = 0.015
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
M+I C + IY GHG V+ D K F F KC R NPR
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPR 47
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 40.7 bits (91), Expect = 0.019
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMR 155
++ G C++ Y+IYPG G+ + DG+ F FL K + L +
Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRK 45
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 169 KVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNM 315
K+TWT+ RR +KK + + IVG SL +I ++N+
Sbjct: 50 KITWTIARRRLWKKVKATDIAQKKKKRNVTVARAIVGISLEEINRRKNL 98
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
C + G + PG GK +K DG T+ +SKC + + R PR
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPR 47
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 36.7 bits (81), Expect = 0.31
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPR 167
M+I C+Y G I PG+G V+VDG F + +C + + M +NP+
Sbjct: 1 MRIYNCSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQ 48
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKV----DGKTFTFLNSKCEAAHLMRRNPR 167
C +S + ++PGHG+ V TF KC A ++ ++NPR
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPR 51
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPR 167
C++ G++I PG G V+ DG F +SKC + L R+P+
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPK 49
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +3
Query: 42 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 137
C Y G I PG G V DG T F +SKCE
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCE 38
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 30 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPR 167
K +C +SG+ + GHG+ ++ D F + K +RNPR
Sbjct: 4 KTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPR 49
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 32.7 bits (71), Expect = 5.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 39 LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 137
+C + G IYPGHG V F F ++KC+
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCK 35
>UniRef50_UPI0000DB7EB7 Cluster: PREDICTED: similar to CG5989-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG5989-PA
- Apis mellifera
Length = 346
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 115 VKVFPSTLTMVLPWPGYILYPL*AQSPIFILT 20
VK+FP L LP+ YI++PL P ++LT
Sbjct: 119 VKLFPVLLISALPFTNYIIFPLAYYFPRYLLT 150
>UniRef50_Q9FKZ0 Cluster: Probable disease resistance protein
At5g66910; n=3; Arabidopsis thaliana|Rep: Probable
disease resistance protein At5g66910 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 815
Score = 31.9 bits (69), Expect = 8.9
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -2
Query: 305 LAIMSLSEAPTIARWNFWVLLVRFFACSSSWPFLNLRLYRTVHVTLXRIPPHQMG 141
+A M + TIA F+ + F+C SS P L + V VTL IP Q+G
Sbjct: 572 IAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLDIPQLQLG 626
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,143,197
Number of Sequences: 1657284
Number of extensions: 7088474
Number of successful extensions: 14065
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 13826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14060
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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