Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M08
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 39 3e-04
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 32 0.047
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 31 0.11
SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor |Schizosacc... 30 0.14
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 29 0.25
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 29 0.33
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 29 0.33
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.44
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 0.58
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.77
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 28 0.77
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.0
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 1.3
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 1.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 1.3
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 1.8
SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr 1... 27 1.8
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 26 2.3
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 26 2.3
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 26 2.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 3.1
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 25 4.1
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 25 5.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 5.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 5.4
SPAC17A5.09c |||protein phosphatase regulatory subunit Glc9|Schi... 25 5.4
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 5.4
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc... 25 5.4
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 25 5.4
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 7.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 25 7.2
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.2
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.2
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 24 9.5
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 24 9.5
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 24 9.5
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 9.5
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 24 9.5
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 24 9.5
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 39.1 bits (87), Expect = 3e-04
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 170 SSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISP 349
+S + + E+ S+ SS+SPL PS S CT STS P+ G S S+PI+P
Sbjct: 81 TSASTPIITESTSSTSSASTTGSSSSPL----PSTSTSCTTSTSIPPTGGSSSLSTPITP 136
Query: 350 DTRRLPDPKGTNPKISKPP 406
+P ++ I PP
Sbjct: 137 ---TVPPTSTSSTSIPIPP 152
Score = 37.9 bits (84), Expect = 7e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
SS D++++PL P+ S CT STS P+ G S S+PI+P +P ++ I P
Sbjct: 156 SSTDTNSNPL----PTTSTSCTTSTSIPPTGGSSSLSTPITP---TVPPTSTSSTSIPIP 208
Query: 404 P 406
P
Sbjct: 209 P 209
Score = 35.1 bits (77), Expect = 0.005
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
SS D+++SPL P+ S CT STS P+ G S S+PI+P +P ++ I P
Sbjct: 213 SSTDTNSSPL----PTTSTSCTTSTSI-PTGGSSSLSTPITP---TVPPTSTSSTSIPIP 264
Query: 404 P 406
P
Sbjct: 265 P 265
Score = 30.7 bits (66), Expect = 0.11
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDT 355
SS D+++SPL P+ S CT STS P+ + +P P T
Sbjct: 269 SSTDTNSSPL----PTTSTSCTTSTSIPPTGNSTTPVTPTVPPT 308
Score = 30.3 bits (65), Expect = 0.14
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDT 355
SS +S+SPL PS S CT STS P+ + +P P T
Sbjct: 323 SSTGTSSSPL----PSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
Score = 27.1 bits (57), Expect = 1.3
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDT 355
SS +S+SPL S S CT STS P+ + +P P T
Sbjct: 377 SSTGTSSSPLL----STSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 25.4 bits (53), Expect = 4.1
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Frame = +2
Query: 113 TPPPPTSILH-GCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCT 289
TPPPP S G S+ +S + T + + + + P + S P + +CT
Sbjct: 369 TPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCT 428
Query: 290 PSTSSEPSRGRLSASSPISPD--TRRLPDPKGTNPKISKP 403
ST S P S+P++ T P + P S P
Sbjct: 429 TST-SVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTP 467
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 31.9 bits (69), Expect = 0.047
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 248 PLTDSGPSASEDCTPSTSSEPSRGRLSAS-SP-ISPDTRRLPDPKGTNPKISKPP 406
PL + + P T S PS LS S +P + P + RLP T P+I +PP
Sbjct: 1021 PLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPP 1075
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 30.7 bits (66), Expect = 0.11
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 143 GCRSAEENGSSINETLXLENEVMVD---PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPS 313
G +S + N T+ + + P SS SNS + + P + TP++SS S
Sbjct: 76 GSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILS 135
Query: 314 RGRLSASSPISPDT 355
+ +SS IS T
Sbjct: 136 NSTIPSSSSISAST 149
>SPBC557.03c |pim1|dcd1, ptr2|GDP/GTP exchange factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 539
Score = 30.3 bits (65), Expect = 0.14
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +2
Query: 131 SILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEP 310
SI+ G +A E + ENE + + + +SP+TD+ P + + PST++
Sbjct: 467 SIIAGIPNASEEPVANGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTSNGEPSTATSE 526
Query: 311 SR 316
S+
Sbjct: 527 SK 528
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 29.5 bits (63), Expect = 0.25
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 197 ENEVMVDPWSSMDSSNSPLTDSGPSASE--DCTPSTSSEPSRGRLSASSPISPDTRRLPD 370
EN V+ P+S S S + PSA E D ++ + PS G S + +
Sbjct: 732 ENNVLTKPFSFAPSDKSMFAANIPSAGEGLDQQKTSKALPSTGITKLSENDNEKAEESNE 791
Query: 371 PKGTNPKISKPPFKAA 418
KG N I+K K++
Sbjct: 792 TKGFNTTIAKQNDKSS 807
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 29.1 bits (62), Expect = 0.33
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 245 SPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAADK 424
S ++D+GP + T + SEP + A + P + LP P+ I + + +
Sbjct: 300 SEISDAGPDTNTINTAAKLSEP----VYAKDIVPPPSDNLPKPQLLKRPIDDSDVRISKR 355
Query: 425 ARSRDL 442
+R RDL
Sbjct: 356 SRGRDL 361
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 29.1 bits (62), Expect = 0.33
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA-SSPISPDTRRLPDPKGTNPKISKPPF 409
S NS D SAS+ +P++ S SA S SP + P G +P ISK F
Sbjct: 507 SENSRALDIQLSASDSHSPNSKSTLKSVEGSAFSMSKSPSVLSMTTPSGVSPSISKNGF 565
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 28.7 bits (61), Expect = 0.44
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 254 TDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
TD+ S PS+ S+ L +S T R P P T+PK++ P
Sbjct: 387 TDNKIPESGSDHPSSQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEP 437
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 0.58
Identities = 26/89 (29%), Positives = 36/89 (40%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDC 286
PR PP P+S+ S+ + +S L N++ S+ S P P+ S
Sbjct: 172 PR-PPLPSSV--SSHSSPYSTTSSTSLYSLYNDI------SLSCSPEPYLPLSPTRSPAR 222
Query: 287 TPSTSSEPSRGRLSASSPISPDTRRLPDP 373
TPS S L SP+SP L P
Sbjct: 223 TPSPIRLYSSDALRPQSPLSPSVEYLTPP 251
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 0.77
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 125 PTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSS 304
PTS S+ + SS + TL + SS S+SP + S +S +PS+SS
Sbjct: 300 PTSTSSTISSSSSSSSSFSSTLSSSSMS-----SSSSFSSSPTSSSSTISSSSSSPSSSS 354
Query: 305 EPSRGRLSASS 337
S S SS
Sbjct: 355 FSSTTSSSKSS 365
Score = 25.8 bits (54), Expect = 3.1
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 164 NGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPI 343
+ SS + + L + SS SS+S ++ S S+S STSS S S+SSP
Sbjct: 244 SSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS--PTSTSSTISSSSSSSSSPT 301
Query: 344 S 346
S
Sbjct: 302 S 302
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.9 bits (59), Expect = 0.77
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +2
Query: 125 PTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSS 304
P H A +GSS +E+ +E + DSS+S S+SED S+SS
Sbjct: 92 PPEKAHSSSEASGSGSSSDESDSSSSESESSSEDN-DSSSSSSDSESESSSEDSDSSSSS 150
Query: 305 EPSRGRLSA 331
S S+
Sbjct: 151 SDSESESSS 159
Score = 27.5 bits (58), Expect = 1.0
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Frame = +2
Query: 152 SAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA 331
S+ E+ S + + E+E + DSS+S + S+SED S+SS S S+
Sbjct: 139 SSSEDSDSSSSSSDSESESSSE---GSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS 195
Query: 332 ----SSPISPDTRRLPDPKGTNPKISKPPFKAADKARSRD 439
SS S D+ +G++ S ++ + D
Sbjct: 196 EDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDND 235
Score = 25.0 bits (52), Expect = 5.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 152 SAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA 331
S+ E+ S + + E+E + DSS+S + S+SED S+SS S S+
Sbjct: 193 SSSEDSDSSSSSSDSESESSSE---GSDSSSSSSSSESESSSEDNDSSSSSSDSESESSS 249
Score = 24.2 bits (50), Expect = 9.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 233 DSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA 331
DSS+S S+SED S+SS S S+
Sbjct: 235 DSSSSSSDSESESSSEDSDSSSSSSDSESESSS 267
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.0
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +2
Query: 125 PTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSS 304
PT + S N SS + + + +S S S T+S SAS + TSS
Sbjct: 53 PTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSS 112
Query: 305 EPSRGRLSASSPIS 346
+ L++SS S
Sbjct: 113 SATSSSLASSSTTS 126
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 1.3
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASED- 283
P PPPP + LH RS + + L + + SS ++D
Sbjct: 45 PSNPPPPPTRLHD-RSFKPVSKNYESEGRLTPPPVSMGYRYARSSKQSFQREDSGYNDDV 103
Query: 284 CTPSTSSEPSRGRLSASSPISPDTRRLPDP-KGTNPKISKPPFKAADKARS 433
T S+S R + SP S R P P + S+ P ++ D+ RS
Sbjct: 104 VTNSSSHRTPRHHRRSYSPRSDYGSRSPSPHSSVDSHQSRSPVRSRDRDRS 154
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.1 bits (57), Expect = 1.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +2
Query: 47 KTFFYENGG---GRWRWCCSLRGPRTPPPPT 130
K +FY N + +W C +RG PPPP+
Sbjct: 22 KCYFYVNESDPKAKPQWECPVRGLTIPPPPS 52
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 1.3
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSP---ISPDTRRLPDPKGTNPKISKPP 406
SSNS L P + S P +GR + P +P T R P P ++ +S PP
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPP-QGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 236 SSNSPLTDSGPSA--SEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPF 409
++N+P+ ++ P S TP+T SEP G ++ + +R+ P + P F
Sbjct: 239 ATNTPVENTHPENPDSNTSTPTTRSEPLAGEGASIDAENASSRQETTPSDSRPSTLTSLF 298
Query: 410 KA 415
A
Sbjct: 299 NA 300
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTPSTSSE-PSRGRLSASSPISP 349
SSN P+T + S S T STS++ P+ S ++P P
Sbjct: 310 SSNEPMTSNLTSNSGSMTNSTSTDLPTSNLPSQNAPARP 348
>SPAC23G3.12c |||serine protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 996
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 323 LSASSPISPDT-RRLPDPKGTNPKISKPPFKAADKARSRDLTL 448
L +SP+ T RRL NP+I F+A A++R L L
Sbjct: 717 LGLASPVVLSTLRRLQSGVNVNPRILNVEFRAIQLAQARSLGL 759
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 26.2 bits (55), Expect = 2.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 239 SNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTR 358
+N P + S S + S + P+R A+SP S + R
Sbjct: 156 TNDPQSSQSSSVSRNPASSRAGSPTRDNAPAASPASSEPR 195
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 2.3
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +2
Query: 266 PSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAADKARS 433
PS PS+ SE AS+P+S D P NP P + + S
Sbjct: 527 PSQGSLLPPSSISETKSFSTKASTPLSTDDIATPLSSAPNPPSVMPTYARKTSSHS 582
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 2.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 239 SNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPF 409
+NSPLT S++ TP+++ + + SSP S + P + N +I P F
Sbjct: 256 ANSPLTIQRISSAAPSTPTSTENVNYNMTTPSSP-SYSRQTGPASETINDEIDSPNF 311
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGR 322
P ++ SSN+P+ D PSA + T TS PS R
Sbjct: 371 PSATPGSSNAPVVDMHPSA-DSATYPTSIYPSNVR 404
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 4.1
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTP-STSSEPSRGRLSASSPIS 346
+S+ P +S P E+ T STS EPS + SSP S
Sbjct: 404 NSDMPTANSMPVKLENGTDYSTSQEPSSNANNQSSPTS 441
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 5.4
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 327 LSRPREGSLEVEGVQSSL----ADGPESVNGEFEESILLHGSTI 208
+ RP+EGS +E +Q++L P S+NG F + L G+ +
Sbjct: 529 IPRPQEGSKSMEAIQNALVLVHCRMPYSING-FSSTKLYSGTGV 571
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.0 bits (52), Expect = 5.4
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 212 VDP-WSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPD 352
+DP W DSSN P T PSAS P ++ S R ++PD
Sbjct: 1 MDPHWKRHDSSNIP-TQPSPSAS----PKSNKPSSAQRFGNLPWVAPD 43
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 266 PSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAADKARSR 436
P+A P+ SSE SS SP + P P ++ + P + +++S+
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAPARTSVSRSKSK 1288
>SPAC17A5.09c |||protein phosphatase regulatory subunit
Glc9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 5.4
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 284 CT-PSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
CT P+TS + R+ A +P LP K P+ +KP
Sbjct: 155 CTEPTTSGDRYTVRMKAPTPKYSTDNHLPSKKELFPRETKP 195
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.0 bits (52), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISK 400
+S + D G SA+ SS P +S P+SP + P +PK+S+
Sbjct: 283 ASTAESLDDGHSATTIQQGDVSSYPLSRSVSTPVPMSPISISPAKPSPQSPKLSQ 337
>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.0 bits (52), Expect = 5.4
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +2
Query: 143 GCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGR 322
G S + +S+ + L ENE S +P+T SGP T S +P R
Sbjct: 164 GPSSLASSWASVGQRLGTENEA--------SGSTTPVTQSGPPRENPPTESQPEKPLRRT 215
Query: 323 L 325
L
Sbjct: 216 L 216
>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
E3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 5.4
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -2
Query: 327 LSRPREGSLEVEGVQSSLADGPESVNGEFEESILLHGSTITSFSX*RVSLMLDPFSSAD 151
LS P+ L +QSS DG SV + + +LL GST S LD SS +
Sbjct: 124 LSDPKSSPL----MQSSTLDGVSSVCYKKDTPLLLTGSTSRSVHIIDTRQQLDSVSSVN 178
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 7.2
Identities = 16/84 (19%), Positives = 35/84 (41%)
Frame = +2
Query: 128 TSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSE 307
TS ++ G S+ T+ + + + D+S+ +++ SA++ TP+ +
Sbjct: 866 TSEVNALTLTSRKGQSVRGTISVNCDYRPCLRLNTDNSSKQSSENVQSATDPTTPAKDNS 925
Query: 308 PSRGRLSASSPISPDTRRLPDPKG 379
S S+ + + L P G
Sbjct: 926 TSNAETSSITSVISVNEALQYPSG 949
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 24.6 bits (51), Expect = 7.2
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSI-NETLXLENEVMVDPWSSMDSSNSPLTDSGPSASED 283
P PP PT+ + + E+N S I +T+ + + +D S + + E
Sbjct: 813 PPAPPLPTA-MSSLQKFEKNDSQIFRKTIIIPENISIDDIFKFCSGSESEVYASKIPGEL 871
Query: 284 CTPS 295
C PS
Sbjct: 872 CNPS 875
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 24.6 bits (51), Expect = 7.2
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 242 NSPLT-DSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPK 391
NSP + S P+ + PS+ E + + + S PI+ + +P+ K P+
Sbjct: 196 NSPASITSKPATTSAAQPSSKVEENMAK-ATSQPITTAEKEIPELKPIEPE 245
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 24.6 bits (51), Expect = 7.2
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPST--SSEPSRGRLSASSPISPDTRRLP 367
SS SN+P + + AS + + ++ ++P R P++PDT +P
Sbjct: 131 SSTGLSNAPPSANVSKASSNLSLASLAKTQPERATPEVCVPLNPDTGSVP 180
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 7.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 215 DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISP 349
D SS S+ S ++ SAS + S SS + SASS SP
Sbjct: 251 DDSSSASSATSSVSSVVSSASSALSASASSASASVSSSASSDASP 295
Score = 24.2 bits (50), Expect = 9.5
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +2
Query: 125 PTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSS 304
P+S S+ ++ SS + + + SS SS+S + + PS+S+ + +SS
Sbjct: 165 PSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSS 224
Query: 305 EPSRGRLSASSPIS 346
ASS S
Sbjct: 225 SFITSTTPASSSSS 238
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 24.2 bits (50), Expect = 9.5
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPD 370
+++ S + + + S+S+ + S SS + +S +SP S LP+
Sbjct: 151 TTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASSSATPLPN 199
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 24.2 bits (50), Expect = 9.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 269 SASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPK 391
+AS P +S P + +PI+P+ +P P NPK
Sbjct: 305 AASATAPPQVTS-PMVSQTQPVNPITPNYSSIPLPAERNPK 344
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 24.2 bits (50), Expect = 9.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 300 EVEGVQSSLADGPESVNGEFEESIL 226
E+E +QSS+ PE + G+ ++ L
Sbjct: 231 EIEKLQSSIVHSPEKLKGKIADTSL 255
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 24.2 bits (50), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASS 337
P S+ S SP ++SGP+ S P+++S PS + +S
Sbjct: 374 PHSNHLHSPSPNSNSGPTDSLS-APNSTSSPSMAHANGAS 412
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 18 FCLNVLIVQPKHFFMK 65
FC +L + PK FF+K
Sbjct: 327 FCCTLLCLSPKQFFLK 342
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 24.2 bits (50), Expect = 9.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 345 RLIRAACPTLKAPTLKYLNPHSKQLTRRG 431
RLIRA C T + +PH++++ +G
Sbjct: 159 RLIRAGCAFTDFGTRRRRDPHTQEIVLQG 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,787,483
Number of Sequences: 5004
Number of extensions: 34535
Number of successful extensions: 215
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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