Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M08
(454 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 36 0.013
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 36 0.017
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 32 0.16
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 32 0.16
At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family... 32 0.16
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 32 0.16
At1g64300.1 68414.m07287 protein kinase family protein contains ... 32 0.21
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 31 0.28
At2g24590.1 68415.m02936 splicing factor, putative similar to to... 31 0.28
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 31 0.36
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 31 0.48
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 31 0.48
At4g24330.1 68417.m03492 expressed protein hypothetical protein ... 30 0.64
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 30 0.64
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 30 0.64
At2g27060.1 68415.m03251 leucine-rich repeat transmembrane prote... 30 0.64
At2g07505.1 68415.m00868 hypothetical protein and genefinder 30 0.64
At2g01060.2 68415.m00011 myb family transcription factor contain... 30 0.64
At2g01060.1 68415.m00012 myb family transcription factor contain... 30 0.64
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 30 0.64
At1g27430.1 68414.m03343 GYF domain-containing protein contains ... 30 0.64
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 30 0.84
At5g15860.2 68418.m01856 expressed protein 29 1.1
At5g15860.1 68418.m01855 expressed protein 29 1.1
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 29 1.1
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 29 1.1
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 1.1
At1g05450.2 68414.m00553 protease inhibitor/seed storage/lipid t... 29 1.1
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 1.5
At3g16320.1 68416.m02061 cell division cycle family protein / CD... 29 1.5
At3g02420.1 68416.m00229 expressed protein 29 1.5
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 1.9
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 1.9
At5g10550.1 68418.m01221 DNA-binding bromodomain-containing prot... 29 1.9
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 29 1.9
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 29 1.9
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote... 29 1.9
At2g47550.1 68415.m05934 pectinesterase family protein contains ... 29 1.9
At2g18470.1 68415.m02151 protein kinase family protein contains ... 29 1.9
At1g24300.1 68414.m03066 GYF domain-containing protein contains ... 29 1.9
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 2.6
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 28 2.6
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 2.6
At4g09060.1 68417.m01493 expressed protein 28 3.4
At3g53530.1 68416.m05911 heavy-metal-associated domain-containin... 28 3.4
At3g08840.3 68416.m01027 D-alanine--D-alanine ligase family simi... 28 3.4
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi... 28 3.4
At3g08840.1 68416.m01028 D-alanine--D-alanine ligase family simi... 28 3.4
At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger) fa... 28 3.4
At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger) fa... 28 3.4
At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger) fa... 28 3.4
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 28 3.4
At5g38840.1 68418.m04698 forkhead-associated domain-containing p... 27 4.5
At4g15120.1 68417.m02323 VQ motif-containing protein contains PF... 27 4.5
At3g24630.1 68416.m03093 hypothetical protein 27 4.5
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 27 4.5
At3g10010.1 68416.m01201 HhH-GPD base excision DNA repair family... 27 4.5
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 27 4.5
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 27 4.5
At2g39580.1 68415.m04855 expressed protein 27 4.5
At2g28150.1 68415.m03419 expressed protein 27 4.5
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 27 4.5
At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein ... 27 5.9
At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein ... 27 5.9
At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein ... 27 5.9
At4g15890.1 68417.m02415 expressed protein 27 5.9
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 27 5.9
At2g29630.2 68415.m03600 thiamine biosynthesis family protein / ... 27 5.9
At2g29630.1 68415.m03599 thiamine biosynthesis family protein / ... 27 5.9
At1g02080.1 68414.m00130 transcriptional regulator-related conta... 27 5.9
At5g66620.1 68418.m08397 LIM domain-containing protein contains ... 27 7.8
At5g44680.1 68418.m05474 methyladenine glycosylase family protei... 27 7.8
At4g08500.1 68417.m01401 mitogen-activated protein kinase kinase... 27 7.8
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 27 7.8
At3g24780.1 68416.m03110 hypothetical protein 27 7.8
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 7.8
At3g22070.1 68416.m02785 proline-rich family protein contains pr... 27 7.8
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 27 7.8
At1g78310.1 68414.m09126 VQ motif-containing protein contains PF... 27 7.8
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 27 7.8
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 27 7.8
At1g20500.1 68414.m02554 4-coumarate--CoA ligase family / 4-coum... 27 7.8
At1g17790.1 68414.m02202 DNA-binding bromodomain-containing prot... 27 7.8
At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)... 27 7.8
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPIS 346
PW D + SP ++ PS + +PST+S PS G ++A SPI+
Sbjct: 37 PW---DHNVSPPPETAPSPTPTSSPSTTSPPSPGPVAAPSPIN 76
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 35.5 bits (78), Expect = 0.017
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +2
Query: 158 EENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASS 337
+E G + E + N D + ++ P T + ++ P+TSS + S+ +
Sbjct: 1971 DEGGDAAEEAADIPNNAN-DQQEAPETDIKPETSAATTSPVSTAPTTSSTLASAITSSGA 2029
Query: 338 PISPDTRRLPDPKGTNPKISKPPFKAADKARSR 436
P + D +R P P G + I +A K R R
Sbjct: 2030 PETEDPKRAPSPGGGSSTIVTLADRAQMKRRER 2062
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 32.3 bits (70), Expect = 0.16
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +2
Query: 212 VDPWSSMDSSNSPLTDS-GPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNP 388
V P +S S +P + P +S +P+TS S S S P+SP T PK T+P
Sbjct: 168 VSPTTSPPGSTTPPGGAHSPKSSSAVSPATSPPGSMAPKSGS-PVSPTTSPPAPPKSTSP 226
Query: 389 ------KISKPPFKAADKARS 433
++ PP A K+ S
Sbjct: 227 VSPSSAPMTSPPAPMAPKSSS 247
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPIS-PDTRRLPDPKGTNPKI 394
P S SS + T G S TPS P +S S PI+ P P G+ P
Sbjct: 490 PGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSP 549
Query: 395 SKP 403
S P
Sbjct: 550 SSP 552
Score = 30.7 bits (66), Expect = 0.48
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGP-SASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKI 394
P S + S +P T P S ++ P S P G SSP P +P P P
Sbjct: 554 PSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFTGPSPPSSPSPPLPPVIPSPPIVGPTP 613
Query: 395 SKPP 406
S PP
Sbjct: 614 SSPP 617
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/67 (26%), Positives = 25/67 (37%)
Frame = +2
Query: 206 VMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN 385
++ P S+ S SP T PS+ + P+ G SSP +P P T
Sbjct: 454 IVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTT 513
Query: 386 PKISKPP 406
P P
Sbjct: 514 PSPGGSP 520
>At3g45230.1 68416.m04881 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to vegetative cell wall
protein gp1 [Chlamydomonas reinhardtii]
gi|12018147|gb|AAG45420
Length = 175
Score = 32.3 bits (70), Expect = 0.16
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN-PKI 394
P S D ++SPL + P + + + P+ + SSP P+T P P N P +
Sbjct: 27 PAPSPDLADSPLIHASPPSKL----GSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSV 82
Query: 395 SKP 403
S P
Sbjct: 83 SPP 85
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 32.3 bits (70), Expect = 0.16
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = +2
Query: 110 RTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCT 289
+T P S S + S + L + D SS S+SP + S S+S D +
Sbjct: 412 KTTSSPVSSSAKTTSTPVSSSPDTSSFLLSLSLAADSSSSDSDSSSPDSSSSVSSSPDSS 471
Query: 290 PSTSSEPSRGRLSASSPIS 346
S SS P +SSP S
Sbjct: 472 SSVSSSPDSYSSFSSSPDS 490
>At1g64300.1 68414.m07287 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 717
Score = 31.9 bits (69), Expect = 0.21
Identities = 24/109 (22%), Positives = 43/109 (39%)
Frame = +2
Query: 119 PPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPST 298
PP T ++ + S ++T + +E + S++ S + + S S +P +
Sbjct: 600 PPTTMPMYTKSLCLDAISEYSDTRSVYSEAPIKKTSALKKSGDTIKNRRNSISGLRSPGS 659
Query: 299 SSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAADKARSRDLT 445
S R SSP+SP R + + ++ P R R LT
Sbjct: 660 SPIKPRSTPKVSSPLSPFGRSSSNKANKDTRLPLSPMSPLSHGRRRQLT 708
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 31.5 bits (68), Expect = 0.28
Identities = 27/99 (27%), Positives = 39/99 (39%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDC 286
P + P S L S EE+ S + + E + + P SS + + S P A
Sbjct: 59 PSSSPEEDSPLPPSSSPEED-SPLAPSSSPEVDSPLAPSSSPEVDSPQPPSSSPEADSPL 117
Query: 287 TPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
PS+S E + + ASSP P P P+ P
Sbjct: 118 PPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESP 156
Score = 30.3 bits (65), Expect = 0.64
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDC 286
P + P S L S EE+ S + + E + + P SS + + S P
Sbjct: 47 PSSSPEEDSPLSPSSSPEED-SPLPPSSSPEEDSPLAPSSSPEVDSPLAPSSSPEVDSPQ 105
Query: 287 TPSTSSE-----PSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
PS+S E P A+SP SP + P+ +P PP
Sbjct: 106 PPSSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPP 150
Score = 29.9 bits (64), Expect = 0.84
Identities = 26/104 (25%), Positives = 43/104 (41%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDC 286
P P S L S EE+ S ++ + E + + P SS + + S P
Sbjct: 35 PGREPSTDSPLSPSSSPEED-SPLSPSSSPEEDSPLPPSSSPEEDSPLAPSSSPEVDSPL 93
Query: 287 TPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAA 418
PS+S E + +SSP + P P ++P+ + P A+
Sbjct: 94 APSSSPEVDSPQPPSSSPEADS----PLPPSSSPEANSPQSPAS 133
>At2g24590.1 68415.m02936 splicing factor, putative similar to to
RSZp22 protein [Arabidopsis thaliana]
gi|2582645|emb|CAA05352
Length = 196
Score = 31.5 bits (68), Expect = 0.28
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 329 ASSPISPDTRRLPDPKGTNPKISKPPFKAADK 424
A SP P RR P P+G N S PP++A D+
Sbjct: 149 ARSP-PPPRRRSPSPRGRNYSRSPPPYRARDE 179
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 31.1 bits (67), Expect = 0.36
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 221 WSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKIS 397
+S S P + S S +PS + PS RLS +SP SP + P+ T+P S
Sbjct: 1713 YSPTSPSYGPTSPSYNPQSAKYSPSIAYSPSNARLSPASPYSPTS---PNYSPTSPSYS 1768
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 30.7 bits (66), Expect = 0.48
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 245 SPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPD-PKGTNPKISKPP 406
SP T S P + TPST S P + SSP SP + P P + P + PP
Sbjct: 124 SPSTPSSPPS----TPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPP 174
Score = 27.9 bits (59), Expect = 3.4
Identities = 23/55 (41%), Positives = 25/55 (45%)
Frame = +2
Query: 239 SNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
S+ P T S PS S TPST S P SP SP + LP P P S P
Sbjct: 129 SSPPSTPSTPS-SPPSTPSTPSSP-------PSPPSPPSPSLP-PSSLPPSASPP 174
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 30.7 bits (66), Expect = 0.48
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 263 GPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
G S CT S S P+ +S S+PI P T P P PK S PP
Sbjct: 56 GDSKVWKCTYSNGSAPAIS-ISPSTPI-PSTPSTPSPPPPAPKKSPPP 101
>At4g24330.1 68417.m03492 expressed protein hypothetical protein -
Caenorhabditis elegans,PID:e1350884
Length = 478
Score = 30.3 bits (65), Expect = 0.64
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 230 MDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPD 352
+ S S + D PS D TP++ S+P + SS IS D
Sbjct: 56 LTQSESTVLDLDPSPDSDSTPASKSDPPTQTVKPSSSISFD 96
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 30.3 bits (65), Expect = 0.64
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 89 CCSLRGPRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSP 250
C S++ R+ +IL CR+A +N T NEV D SS++ N P
Sbjct: 1267 CNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVP 1320
>At2g34680.1 68415.m04260 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; identical to cDNA hypothetical protein
(AIR9) mRNA, partial cds GI:3695020
Length = 1661
Score = 30.3 bits (65), Expect = 0.64
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +2
Query: 176 INETLXLENEVMVDPWSSMDSSNSPLTDSGP----SASEDCTPSTSSEPSRGRLSASSPI 343
+ E L ++V+ S+ S P+ S P S+ + T S+PS S P+
Sbjct: 87 VTENLAGTSKVLPKQVSTTASRTDPVRRSLPELRKSSVSSLSAKTVSKPSLSESKKSVPV 146
Query: 344 SPDTRRLPDPKGTNPKISKPPFKA 415
SP +R L K T +SKP A
Sbjct: 147 SPGSRSL--TKSTGFSLSKPESSA 168
>At2g27060.1 68415.m03251 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1007
Score = 30.3 bits (65), Expect = 0.64
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASED- 283
P+T P ++++ S +EN SS + T + + SS S S +S P E
Sbjct: 596 PKTEPSSSNVIAAKNSVQENESSSSTTSTPSIKAKLPVSSSRFSQYSDSENSSPFLKEPN 655
Query: 284 ---CTPSTSSEPSRGRLSASSPISPDTRRLPD 370
+ S E ++S+S+P P + PD
Sbjct: 656 EELHSESRKDEILSSQVSSSTPSLPKIQNSPD 687
>At2g07505.1 68415.m00868 hypothetical protein and genefinder
Length = 143
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 98 LRGPRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVD 217
LR +T P + + CR EENGS L +EVMV+
Sbjct: 20 LRTSKTVKNPRRLFYACRCGEENGS--GHLFRLTDEVMVE 57
>At2g01060.2 68415.m00011 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 237
Score = 30.3 bits (65), Expect = 0.64
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTR---RLPDPKGTN 385
DP + +S SPL D + +DC P S S P++PD+ PD
Sbjct: 115 DPATPAPTSESPLQDK---SGKDCGPDKSLSVDESLSSYREPLTPDSGCNIGSPDESTGE 171
Query: 386 PKISKPP 406
++SK P
Sbjct: 172 ERLSKKP 178
>At2g01060.1 68415.m00012 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 286
Score = 30.3 bits (65), Expect = 0.64
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 215 DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTR---RLPDPKGTN 385
DP + +S SPL D + +DC P S S P++PD+ PD
Sbjct: 164 DPATPAPTSESPLQDK---SGKDCGPDKSLSVDESLSSYREPLTPDSGCNIGSPDESTGE 220
Query: 386 PKISKPP 406
++SK P
Sbjct: 221 ERLSKKP 227
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 30.3 bits (65), Expect = 0.64
Identities = 27/94 (28%), Positives = 41/94 (43%)
Frame = +2
Query: 152 SAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA 331
S+E++ SS +E + P ++ DSS+S D SED P+T +A
Sbjct: 157 SSEDDSSSEDEPAKKPAAKIAKP-AAKDSSSSD--DDSDEDSEDEKPATKKAAPAAAKAA 213
Query: 332 SSPISPDTRRLPDPKGTNPKISKPPFKAADKARS 433
SS S D + + P K KA+ K+ S
Sbjct: 214 SSSDSSDEDSDEESEDEKPAQKKADTKASKKSSS 247
>At1g27430.1 68414.m03343 GYF domain-containing protein contains
Pfam profile: PF02213 GYF domain
Length = 1531
Score = 30.3 bits (65), Expect = 0.64
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 444 VRSRDRALSAALNGGLDILGLVP-LGSGKRRVSGEIGEE-ALSRPREGSLEVEGVQSSLA 271
+++ D L + NGGL VP L S G G LS ++ +SS+
Sbjct: 381 MKNNDSGLLGSHNGGLGAASSVPRLNSVASESYGSGGAGYQLSHGSPEAVRSVFTKSSVL 440
Query: 270 DGPESVNGEFEES 232
DG ESV G FE++
Sbjct: 441 DGSESVVGSFEQA 453
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 29.9 bits (64), Expect = 0.84
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 227 SMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
S DSS +P ++ G ++S +P SS PSR S + S + + G S+ P
Sbjct: 18 SSDSSLNPSSEHGNNSSSSLSPLPSSPPSRISSSTGTRFSGHSESSHNFSGG----SREP 73
Query: 407 FKAADKARSR 436
AA++ SR
Sbjct: 74 SVAAEEGHSR 83
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 230 MDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRL 364
M S+ S + + P D T + EP R R+S SP+ RR+
Sbjct: 17 MTSTVSEIEEVLPDEDSDRTTLLNGEPLRRRVSGKSPVDEGPRRI 61
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 230 MDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRL 364
M S+ S + + P D T + EP R R+S SP+ RR+
Sbjct: 17 MTSTVSEIEEVLPDEDSDRTTLLNGEPLRRRVSGKSPVDEGPRRI 61
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -2
Query: 420 SAALNGGLDILGLVPLGSGKRRVSGEIGEEALSRPREGSLEVEGVQSSLADGPESVNGE 244
S A++G D +G L ++ +G+ +S +GSL+ + PE V+GE
Sbjct: 55 SEAVSGNSDKVGADDLSDSEKEKPNLVGDGKVSDEVDGSLKEDSTTPEATPKPEVVSGE 113
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 227 SMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
S SS+SP PS S TP +++ + + SP + P+P P S P
Sbjct: 28 SASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPSPSPSPPKKTPKLNPNPSSNLPARSPSP 87
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN 385
P S S N + PS S +P P + P S D++ P P+G N
Sbjct: 16 PPSPSSSDNQQQSSPPPSDSSSPSPPAPPPPDDSSNGSPQPPSSDSQSPPSPQGNN 71
>At1g05450.2 68414.m00553 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related similar to geranyl
diphosphate synthase large subunit [Mentha x piperita]
GI:6449052
Length = 205
Score = 29.5 bits (63), Expect = 1.1
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +2
Query: 236 SSNSPLTDSGPSASEDCTPSTSSEPS--RGRLSASSPISPDTRRLPDPK-------GTNP 388
+S +PL GP++ T T S+ S G S P SP T + P+ K G +P
Sbjct: 111 ASAAPLPTPGPASFGPTTSPTDSQTSDPEGSASFRPPTSPTTSQTPNDKDLSGSGNGGDP 170
Query: 389 KISKPPFKAADKARSRDLTL 448
PP ++ + S L L
Sbjct: 171 MGFAPPPPSSSPSSSHSLKL 190
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 1.5
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 230 MDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
M ++ SP T PS T ST++ P +ASSP T P P + S PP
Sbjct: 1 MSTAPSPGTTPSPSPPSPPTNSTTTTPPP---AASSPPPTTTPSSPPPSPSTNSTSPPP 56
Score = 26.6 bits (56), Expect = 7.8
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 227 SMDSSNSPLTDSGPSASEDCTPS-TSSEPSRGRLSASSPISPDTRRL-PDPKGTNPKISK 400
S ++ SP S P+ S TP +S P +S P SP T P P P
Sbjct: 6 SPGTTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLP 65
Query: 401 PP 406
PP
Sbjct: 66 PP 67
>At3g16320.1 68416.m02061 cell division cycle family protein / CDC
family protein similar to SP|P30260|CC27_HUMAN Protein
CDC27Hs (Cell division cycle protein 27 homolog) Homo
sapiens, C-terminus similar to C-term of cell division
control protein 27 SP:P38042 (Saccharomyces cerevisiae);
contains Pfam profile PF00515 TPR Domain
Length = 727
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 215 DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN 385
+P S +S PS S + PS SS + R+ +S + PDT L DP T+
Sbjct: 303 NPMSQSFGKDSHWLHLSPSES-NYAPSLSSMIGKCRIQSSKEVIPDTVTLNDPATTS 358
>At3g02420.1 68416.m00229 expressed protein
Length = 348
Score = 29.1 bits (62), Expect = 1.5
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +2
Query: 41 AAKTFFYENGGGRWR--WCCSLRGPRTPPPPTSILHGCRSAEENGSSINETLXLENEVMV 214
AA F YEN RW W L P P + H R + ++ +++V
Sbjct: 15 AAAAFDYENDA-RWADYWSNILIPPHMASRPEVVDHFKRKFYQR--------YIDPDLVV 65
Query: 215 DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSP 340
+P S+ SS+ + SAS + S ++E R R S S P
Sbjct: 66 EPMSTSSSSSQSARPTATSASSTAS-SNANEQVRSRNSGSVP 106
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 248 PLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAAD 421
P SA P + P G P P R P P PK +PP AD
Sbjct: 375 PAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPRPPSGPAD 432
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +2
Query: 248 PLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPPFKAAD 421
P SA P + P G P P R P P PK +PP AD
Sbjct: 375 PAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPRPPSGPAD 432
>At5g10550.1 68418.m01221 DNA-binding bromodomain-containing protein
low similarity to kinase [Gallus gallus] GI:1370092;
contains Pfam profile PF00439: Bromodomain
Length = 678
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +2
Query: 107 PRTPPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMD---SSNSPLTDSGPSAS 277
PR PP T + + + G + E + + ++ V+ + S++ + G S+S
Sbjct: 557 PRNMPPVTEMGSAEKRGRKGGEAGEEDVDIGEDIPVEDYPSVEIERDGTAAAASGGSSSS 616
Query: 278 EDCTPSTSSEPSRGRLSASSPISPDTRRLPDP 373
+ S SS S +SS D + P
Sbjct: 617 GSFSSSGSSSSSDSESGSSSGSDSDADSVQSP 648
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.7 bits (61), Expect = 1.9
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN----PK 391
SS S T G S S +PS P+RG LS S +SP +GTN +
Sbjct: 332 SSSSISRGMSTSRGVSPSRGLSPSRGLSPTRG-LSPSRGLSPS-------RGTNTSCFAR 383
Query: 392 ISKPPFKAADKARSRDLT 445
S PP + +R R T
Sbjct: 384 PSTPPSRGISPSRIRQTT 401
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.7 bits (61), Expect = 1.9
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTN----PK 391
SS S T G S S +PS P+RG LS S +SP +GTN +
Sbjct: 332 SSSSISRGMSTSRGVSPSRGLSPSRGLSPTRG-LSPSRGLSPS-------RGTNTSCFAR 383
Query: 392 ISKPPFKAADKARSRDLT 445
S PP + +R R T
Sbjct: 384 PSTPPSRGISPSRIRQTT 401
>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich repeat transmembrane
protein kinase 1 GB:AAC27894 from [Zea mays]
Length = 646
Score = 28.7 bits (61), Expect = 1.9
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = +2
Query: 8 VIGXLFERSNSAAKTFFYENGGGRWRWCCSLRGPRTPPPPTSILHGCRSAE-ENGSSINE 184
+I + R NS + F+++ G R P P + +L E +N +++
Sbjct: 254 LIALISRRKNSNDSSHFFDDEKGTNR-----SKPLFTPQSSQMLQFDNMEEFKNQKTVDS 308
Query: 185 TLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTR 358
LE + V SS+ NSP PS TP SS +S SPDTR
Sbjct: 309 NTSLETKPSVKRTSSVSFKNSPTFHLIPSTQVAATPDRSS---------TSQDSPDTR 357
>At2g47550.1 68415.m05934 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 560
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 167 GSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPS-ASEDCTPSTSSEPSRGRLSA 331
G IN+T+ N +VD W++ +S+ L SGP+ + T ++ P++G+ A
Sbjct: 303 GDGINQTVITGNRSVVDGWTTFNSATFIL--SGPNFIGVNITIRNTAGPTKGQAVA 356
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
SS +S+ + S PS + +TSS P+ S + P D+ P P T+P +
Sbjct: 3 SSPESAPPTNSTSSPSPPSNTNSTTSSPPAPSPPSPTPP-QGDSSSSPPPDSTSPPAPQA 61
Query: 404 P 406
P
Sbjct: 62 P 62
>At1g24300.1 68414.m03066 GYF domain-containing protein contains
Pfam profile: PF02213 GYF domain
Length = 1417
Score = 28.7 bits (61), Expect = 1.9
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 444 VRSRDRALSAALNGGLDILGLVP-LGSGKRRVSGEIGEE-ALSRPREGSLEVEGVQSSLA 271
+++ D L + NGGL VP L S G G +S ++ +S +
Sbjct: 303 MKNNDSGLLGSHNGGLGAASSVPRLNSVASESYGSFGAGYQVSHGSPEAVRSVFTKSPVL 362
Query: 270 DGPESVNGEFEESIL 226
DG ESV G FE+ +
Sbjct: 363 DGSESVVGSFEQDYM 377
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +2
Query: 227 SMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
+ ++S S P + +P T PS S+P++P P +P+ PP
Sbjct: 63 TQETSPPTSPSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAPP-QTPSNQSPERPTPP 121
Query: 407 FKAADKARSR 436
A+ R+R
Sbjct: 122 SPGANDDRNR 131
Score = 27.9 bits (59), Expect = 3.4
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
S +DSS +P T +G S +PS S P SSP P + P P + S P
Sbjct: 4 SPVDSSPAPETSNGTPPSNGTSPSNESSPP---TPPSSP-PPSSISAP-PPDISASFSPP 58
Query: 404 P 406
P
Sbjct: 59 P 59
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 263 GPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
GP+ + P+T + R +A +P SP P T P +S+PP
Sbjct: 25 GPAPTISPLPATPTPSQSPRATAPAP-SPSANPPPSAPTTAPPVSQPP 71
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.3 bits (60), Expect = 2.6
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +2
Query: 149 RSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLS 328
++ E ET L ++ + ++ S L S PS D T++EP +
Sbjct: 419 KTEEAESEEEKETWGLLKIMLEEDGNAKTKLRSHLGFSLPSEEND---QTANEP---HAT 472
Query: 329 ASSPISPDTRRLPDPKGTNPKISKPPFKAA 418
SS +T+++P+P+G + S P F A
Sbjct: 473 CSSTNVEETQKVPEPEGEEEESSDPTFDDA 502
>At4g09060.1 68417.m01493 expressed protein
Length = 341
Score = 27.9 bits (59), Expect = 3.4
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +2
Query: 170 SSINETLXLENEVMV-DPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASS--- 337
S++N L EN ++ S + S++ + +++ +P T S P RL SS
Sbjct: 262 STLNRKLDKENRKLLRQQQSPLCSADKNRNSASAKSNKRKSPKTMSSPVEKRLEFSSPEI 321
Query: 338 ---PISPDTRRLPDPKGTN 385
P+SP PD K N
Sbjct: 322 SRKPLSPVWNNSPDSKMNN 340
>At3g53530.1 68416.m05911 heavy-metal-associated domain-containing
protein low similarity to gi:3168840 copper homeostasis
factor; contains Pfam heavy-metal-associated domain
PF00403
Length = 247
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 29 RSNSAA--KTFFYENGGGRWRWCCSLRGPRTPPPPTSILHGCRSAEENGSSINETLXLE 199
RSNS + K Y+ R + C + P+TPP T L G GS+ +T+ E
Sbjct: 82 RSNSGSLMKLISYDVSLARKSFGCVVATPKTPPGSTRYLLGSDPVSLAGSTGQDTVATE 140
>At3g08840.3 68416.m01027 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 845
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 122 PPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSN--SPLTDS-GPSASED 283
PP +H +S E S I + L L + +D W +SN SP++++ G + S D
Sbjct: 358 PPRFPIHVIKSIREEASLIFQKLGLRDFARIDGWYLAPNSNLSSPVSETLGGTKSGD 414
>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 937
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 122 PPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSN--SPLTDS-GPSASED 283
PP +H +S E S I + L L + +D W +SN SP++++ G + S D
Sbjct: 358 PPRFPIHVIKSIREEASLIFQKLGLRDFARIDGWYLAPNSNLSSPVSETLGGTKSGD 414
>At3g08840.1 68416.m01028 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 519
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 122 PPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSN--SPLTDS-GPSASED 283
PP +H +S E S I + L L + +D W +SN SP++++ G + S D
Sbjct: 358 PPRFPIHVIKSIREEASLIFQKLGLRDFARIDGWYLAPNSNLSSPVSETLGGTKSGD 414
>At2g40830.3 68415.m05041 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKIS 397
PW +S PSAS + + P+R S+SS S ++R + + NP S
Sbjct: 219 PWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNER-RNPFSS 277
Query: 398 KPPFKAADKARS 433
PF+++ + S
Sbjct: 278 FWPFRSSGSSSS 289
>At2g40830.2 68415.m05040 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKIS 397
PW +S PSAS + + P+R S+SS S ++R + + NP S
Sbjct: 219 PWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNER-RNPFSS 277
Query: 398 KPPFKAADKARS 433
PF+++ + S
Sbjct: 278 FWPFRSSGSSSS 289
>At2g40830.1 68415.m05039 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 328
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 218 PWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKIS 397
PW +S PSAS + + P+R S+SS S ++R + + NP S
Sbjct: 219 PWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNER-RNPFSS 277
Query: 398 KPPFKAADKARS 433
PF+++ + S
Sbjct: 278 FWPFRSSGSSSS 289
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.9 bits (59), Expect = 3.4
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 239 SNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSP----ISPDTRRLPDPKGTNPKISKPP 406
S+SPL+ PS S S+ S LS SSP +SP + P P ++P S P
Sbjct: 74 SSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPP-PPPPSSSPLSSLSP 132
>At5g38840.1 68418.m04698 forkhead-associated domain-containing
protein / FHA domain-containing protein related to
adaptor protein kanadaptin [Homo sapiens]
gi|13562130|gb|AAK29177
Length = 735
Score = 27.5 bits (58), Expect = 4.5
Identities = 26/97 (26%), Positives = 38/97 (39%)
Frame = +2
Query: 116 PPPPTSILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPS 295
PPPP + H E N +SI+++ E M P + N P + E P
Sbjct: 8 PPPPRNPSHDIEPPEPNSTSISQS--DETSTMNPP--PPRNPNPPDLKTTEVVVEP-EPI 62
Query: 296 TSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
S+ + A P+ P T + T P+ S PP
Sbjct: 63 EESKDDSVTVDADKPVRPRTVKQNPVPYTIPEWSGPP 99
>At4g15120.1 68417.m02323 VQ motif-containing protein contains
PF05678: VQ motif
Length = 193
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 293 STSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISK 400
ST + + SA SP+SPD RR+ P + S+
Sbjct: 23 STVTTTTTTATSADSPLSPDNRRVAKPTRRRSRASR 58
>At3g24630.1 68416.m03093 hypothetical protein
Length = 724
Score = 27.5 bits (58), Expect = 4.5
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 155 AEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSAS 334
+E N S ET N++ + +S + N D+G +S T S EP ++S
Sbjct: 506 SENNSCSSQETHGSLNQLSTEETTSSEFHNQGHCDNGEVSSCAATIHHSHEPETSQISLK 565
Query: 335 SPIS 346
S +S
Sbjct: 566 SFLS 569
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSE------PSRGRLSASSPISPDTRRLPDPKGTN 385
S+ S +S L+ + S+ TPS++++ P+R + ASS + T + P +
Sbjct: 90 SASKSKSSNLSSAAKSSKSSTTPSSAAQFGGSYSPARAQSRASSQVGAKTGNIIRPSSNS 149
Query: 386 PKISKPP 406
++ P
Sbjct: 150 ASVTTKP 156
>At3g10010.1 68416.m01201 HhH-GPD base excision DNA repair family
protein similar to DEMETER protein [Arabidopsis thaliana]
GI:21743571; contains Pfam profile PF00730: HhH-GPD
superfamily base excision DNA repair protein
Length = 1309
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 131 SILHGCRSAEENGSSINETLXLENEVMVDPWSSMDSSNSP 250
+IL CR+A G +N T NEV D SS++ + P
Sbjct: 1197 TILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVP 1236
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 290 PSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
P T P+ SAS P P + R+ P+ T+P+++ P
Sbjct: 79 PPTPDRPNP--YSASPPPRPASPRVASPRPTSPRVASP 114
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 290 PSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKP 403
P T P+ SAS P P + R+ P+ T+P+++ P
Sbjct: 78 PPTPDRPNP--YSASPPPRPASPRVASPRPTSPRVASP 113
>At2g39580.1 68415.m04855 expressed protein
Length = 1567
Score = 27.5 bits (58), Expect = 4.5
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +2
Query: 143 GCRSAEENGSSINETLXLENEVMVDPWSSMD-SSNSPLTDSGPSASEDCTPSTSSEPSRG 319
G R+ G+ NE E ++D D S D+G SE + S EP
Sbjct: 639 GMRAESRGGTCFNE------ETVIDRGDERDFGSEGTQRDNGSPFSEIYLHNDSLEPGAN 692
Query: 320 RLSASSPISPDTRRLPDPKGTNPKIS 397
+L S +P RR + N ++S
Sbjct: 693 KLQGSPSEAPVERRSIEENSLNYQLS 718
>At2g28150.1 68415.m03419 expressed protein
Length = 540
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 203 EVMVDPWSSM---DSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTR 358
+++V+P SS DSS+S ++G ++ P R +SS +SPD+R
Sbjct: 143 QIVVEPPSSRSMDDSSSSSSMNNGKGTNKHSHEDDELSPPALRSVSSSGVSPDSR 197
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 27.5 bits (58), Expect = 4.5
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +2
Query: 167 GSSINETLXLENEVMVDPWSSMDSSNSPLTDS---GPSASEDCTPSTSSEPSRGRLSASS 337
GSS+ E+ N +M S + P D G S SE PS+ S+P GRL S+
Sbjct: 57 GSSVVESGEFRNTLMQS--GSQATGWFPYRDLYGLGASQSEIAEPSSFSDPENGRLGLSA 114
Query: 338 PISPD 352
D
Sbjct: 115 TCYSD 119
>At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 365
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/71 (19%), Positives = 25/71 (35%)
Frame = +2
Query: 155 AEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSAS 334
+E+ S + + + P + P +S P A + PS+ P +
Sbjct: 70 SEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQ 129
Query: 335 SPISPDTRRLP 367
P RR+P
Sbjct: 130 LPPKERERRVP 140
>At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 463
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/71 (19%), Positives = 25/71 (35%)
Frame = +2
Query: 155 AEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSAS 334
+E+ S + + + P + P +S P A + PS+ P +
Sbjct: 168 SEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQ 227
Query: 335 SPISPDTRRLP 367
P RR+P
Sbjct: 228 LPPKERERRVP 238
>At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/71 (19%), Positives = 25/71 (35%)
Frame = +2
Query: 155 AEENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSAS 334
+E+ S + + + P + P +S P A + PS+ P +
Sbjct: 169 SEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSSPPPPKQSAKEPQ 228
Query: 335 SPISPDTRRLP 367
P RR+P
Sbjct: 229 LPPKERERRVP 239
>At4g15890.1 68417.m02415 expressed protein
Length = 1314
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 170 SSINETLXL-ENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPIS 346
S+I+E + +E++ W + S + D+ S E+C L A + +S
Sbjct: 482 SAISEAFRICTDEIVTTEW--LHSVPRMIMDNETSIQEECENVFHELVLERILRAGNVLS 539
Query: 347 PDTRRLPDPKGTNPK 391
PD+ LP+ + T K
Sbjct: 540 PDSASLPNNRNTTSK 554
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
Spastin (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin
(Fragment) (Swiss-Prot:Q9QYY8) [Mus musculus]; similar
to mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 143 GCRSAE-ENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSE 307
G S E E GSS + + E V+ M+ NSP TD+ P TP+ + E
Sbjct: 72 GSESGEPELGSSDPQAMDAEKPVVTTDVPVME--NSPETDANPEVEVLATPTVAGE 125
>At2g29630.2 68415.m03600 thiamine biosynthesis family protein /
thiC family protein contains Pfam profile: PF01964 ThiC
family
Length = 644
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 290 PSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISK 400
P+T+SE ++ R P SPD + +P + PK +K
Sbjct: 61 PTTNSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTK 97
>At2g29630.1 68415.m03599 thiamine biosynthesis family protein /
thiC family protein contains Pfam profile: PF01964 ThiC
family
Length = 644
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 290 PSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISK 400
P+T+SE ++ R P SPD + +P + PK +K
Sbjct: 61 PTTNSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTK 97
>At1g02080.1 68414.m00130 transcriptional regulator-related contains
Pfam PF04054: CCR4-Not complex component, Not1; contains
TIGRFAM TIGR01612: reticulocyte binding protein; similar
to General negative regulator of transcription subunit 1
(SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs
gb|T44328 and gb|AA395265
Length = 2378
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 420 SAALNGGLDILGLVPLGSGKRRVSGEIGEEALSRPREGSLEVEGVQSSLA-DGPES 256
S L+ G V LGSG VSG++ E LS +++ S ++ DG ES
Sbjct: 1486 SHGLSAASSSSGDVALGSGYGPVSGKVASEFLSNAGNARMDMVSRPSDISVDGFES 1541
>At5g66620.1 68418.m08397 LIM domain-containing protein contains
Pfam profile PF00412: LIM domain
Length = 644
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 122 PPTSILHGCRSAEENGSSIN 181
PP S+ GC A E+G S+N
Sbjct: 281 PPPSLCGGCNFAVEHGGSVN 300
>At5g44680.1 68418.m05474 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 353
Score = 26.6 bits (56), Expect = 7.8
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 158 EENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSA-S 334
+EN S IN L+ + P ++D NS L S P + P S PS +S S
Sbjct: 11 QENISQINGRPVLQPKSNQVP--TLDRRNS-LKKSPP---KPLNPIASKIPSPRPISLIS 64
Query: 335 SPISPDTRRLPDPKGT 382
P+SP+T+ L P G+
Sbjct: 65 PPLSPNTKSLRKPAGS 80
>At4g08500.1 68417.m01401 mitogen-activated protein kinase kinase,
putative similar to mitogen-activated protein kinase
MEKK1 GP|1255448 [Arabidopsis thaliana]
Length = 608
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 263 GPSASEDCTPSTSSEPSRGRLSASSPISPD 352
G +A E C+ +T+ S +S +SPI PD
Sbjct: 296 GDTADETCSFTTNEGDSSSTVSNTSPIYPD 325
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 114 PRPLPRPFFTGADLPKRMDLASTKP 188
P P PRP F G +R+ L S P
Sbjct: 80 PPPPPRPCFNGVSAAQRLPLPSNTP 104
>At3g24780.1 68416.m03110 hypothetical protein
Length = 715
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPI-SPDTRRLPDPKGTNPKIS 397
S + SN+PLT SGP+ + +P R ++ + + +T R PK +N K S
Sbjct: 9 SEIQDSNAPLTSSGPTNPVNTSPPMGQTEERPHTYLAALLKNINTCRPSVPKVSNIKKS 67
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +2
Query: 281 DCTP-STSSEPSRGRLSASSPISPDTRRLPDPKGTNPKISKPP 406
DCTP S P + P P + P P P KPP
Sbjct: 26 DCTPPKPSPAPHKPPKHPVKPPKPPAVKPPKPPAVKPPTPKPP 68
>At3g22070.1 68416.m02785 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 178
Score = 26.6 bits (56), Expect = 7.8
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 260 SGPSASEDCTPSTSSEPSRGRLSASSP-ISPDTRRLPDPKGTNPKISKPPFKAADKARSR 436
SG S PS+SS S S++SP I+P P+P P + P D + S
Sbjct: 39 SGDYCSSSTDPSSSSSSSS---SSTSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSST 95
Query: 437 DLT 445
++
Sbjct: 96 SIS 98
Score = 26.6 bits (56), Expect = 7.8
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 218 PWSSMDSSNSP-LTDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGTNPKI 394
P S DSS+S ++ + P+ + P S P+ + P DT P P T+ I
Sbjct: 85 PPSPTDSSSSTSISPNPPAPIVNPNPPPPSTPNPPPEFSPPPPDLDTTTAPPPPSTDIPI 144
Query: 395 SKPP 406
PP
Sbjct: 145 PPPP 148
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 221 WSSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSP 340
+S SSN T G +S TP++S+ PS G ++S+P
Sbjct: 37 FSFNQSSNPSSTGFGFGSSVSSTPASSTTPSFGFGASSTP 76
>At1g78310.1 68414.m09126 VQ motif-containing protein contains
PF05678: VQ motif
Length = 311
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 287 TPSTSSEPSRGRLSASSPISPDTRRLPDPK 376
+PS PS G+L P+SP T LP PK
Sbjct: 280 SPSILLSPSSGQLGF--PVSPTTVPLPSPK 307
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 26.6 bits (56), Expect = 7.8
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Frame = +2
Query: 116 PPPPTSILHGCRSAEENGSSINETLX-LENEVMVDPWSSMDSSNSPLTDSGPSASEDCTP 292
PP P H S+ + G S++E ++ + + + P SA+ +
Sbjct: 91 PPKPNVQAH--MSSFQGGGSVHEPANTMQPQAPIRKHPTPQPMPMPPPPPSVSANSAQSQ 148
Query: 293 STSSEPSR-GRL-----SASSPISPDTRRLPDPKGTNPKISKPPFKAAD 421
S P R G L S S P S + P P +P +PPF D
Sbjct: 149 PRFSHPQRQGHLNPAVTSMSHPQSSQVQNAPPPASHHPTSQQPPFHHLD 197
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 224 SSMDSSNSPLTDSGPSASEDCTPSTSSEPSRGRLSASSPI 343
SS S SP+T S P +PSTSS + AS+ +
Sbjct: 33 SSSHFSASPVTSSSPLLRSSPSPSTSSAAASSTAVASTKL 72
>At1g20500.1 68414.m02554 4-coumarate--CoA ligase family /
4-coumaroyl-CoA synthase family similar to SP|Q42524 and
SP|Q9S725; contains Pfam AMP-binding enzyme domain
PF00501
Length = 412
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +2
Query: 197 ENEVMVDPWSSMDSSNSPLTDSG------PSASEDCTPSTSSEPSRGR 322
E ++VDP S SNS P+ S D T SS+P RG+
Sbjct: 5 ERSLIVDPRSGFCKSNSTFYSKRQPLSLPPNLSRDVTTFISSQPHRGK 52
>At1g17790.1 68414.m02202 DNA-binding bromodomain-containing protein
similar to SP|P13709 Female sterile homeotic protein
(Fragile-chorion membrane protein) {Drosophila
melanogaster}; contains Pfam profile PF00439:
Bromodomain
Length = 487
Score = 26.6 bits (56), Expect = 7.8
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 125 PTSILHGCRSAE--ENGSSINETLXLENEVMVDPWSSMDSSNSPLTDSGPSASEDCTPST 298
PT+++ G ++ E+G +I + E + S SSNS +DSG C+ T
Sbjct: 422 PTTLVSGTTTSRVTESGKAIRTSSPARQE---NNASGSSSSNSSSSDSG-----SCSSDT 473
Query: 299 SSEPSRGR 322
S+ S GR
Sbjct: 474 DSDSSSGR 481
>At1g09140.1 68414.m01018 SF2/ASF-like splicing modulator (SRP30)
nearly identical to SF2/ASF-like splicing modulator
Srp30 [Arabidopsis thaliana] GI:4775270
Length = 268
Score = 26.6 bits (56), Expect = 7.8
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 206 VMVDPWSSMDSSNSPL-TDSGPSASEDCTPSTSSEPSRGRLSASSPISPDTRRLPDPKGT 382
+ V + S S SP + S S S PS S +S + ISP +R L +
Sbjct: 180 IRVREYESRSVSRSPDDSKSYRSRSRSRGPSCSYSSKSRSVSPARSISPRSRPLSRSRSL 239
Query: 383 NPKISKPPFKAADKARSR 436
+S+ ++ ++RSR
Sbjct: 240 YSSVSRSQSRSKSRSRSR 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,798,357
Number of Sequences: 28952
Number of extensions: 206424
Number of successful extensions: 1174
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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