Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M06
(386 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 87 1e-16
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 77 9e-14
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 77 9e-14
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 77 2e-13
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 56 3e-07
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 54 1e-06
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 48 5e-05
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 46 3e-04
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 46 3e-04
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 44 0.001
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 39 0.029
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 38 0.067
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 35 0.63
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 34 1.1
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 34 1.1
UniRef50_Q5SV98 Cluster: Pleckstrin homology domain containing, ... 33 1.9
UniRef50_Q494U2 Cluster: PLEKHN1 protein; n=5; Eutheria|Rep: PLE... 33 1.9
UniRef50_Q0USN9 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_A0YLG8 Cluster: Gamma-butyrobetaine hydroxylase; n=1; L... 32 4.4
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 32 4.4
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 31 5.8
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 31 5.8
UniRef50_A2TXB8 Cluster: Putative uncharacterized protein; n=2; ... 31 5.8
UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole ge... 31 5.8
UniRef50_Q494U1 Cluster: Pleckstrin homology domain-containing f... 31 5.8
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 31 5.8
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 86.6 bits (205), Expect = 1e-16
Identities = 42/54 (77%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMP
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMP 59
Score = 39.1 bits (87), Expect = 0.029
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 72 CGEGSKTWDRFQMRI 86
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 77.4 bits (182), Expect = 9e-14
Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 77.4 bits (182), Expect = 9e-14
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
Score = 39.1 bits (87), Expect = 0.029
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 70 CGEGSKTWDRFQMRI 84
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/50 (70%), Positives = 43/50 (86%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+P
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLP 57
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 55.6 bits (128), Expect = 3e-07
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +2
Query: 110 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMP
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMP 58
Score = 37.9 bits (84), Expect = 0.067
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQ+RI
Sbjct: 71 CGEGSKTWDRFQLRI 85
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 53.6 bits (123), Expect = 1e-06
Identities = 25/54 (46%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMP 286
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMP
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMP 57
Score = 37.9 bits (84), Expect = 0.067
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRF+MRI
Sbjct: 70 CGEGSKTWDRFEMRI 84
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +2
Query: 104 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 283
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 284 P 286
P
Sbjct: 61 P 61
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+P
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLP 54
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 45.6 bits (103), Expect = 3e-04
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+P
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIP 57
Score = 35.9 bits (79), Expect = 0.27
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWD +QMRI
Sbjct: 70 CGEGSKTWDHYQMRI 84
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 44.0 bits (99), Expect = 0.001
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
+RITLTS+++ SLEK C ++I K+ ++GP+R+P
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIP 53
Score = 32.3 bits (70), Expect = 3.3
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEG+ TWD+F+M+I
Sbjct: 66 CGEGTNTWDKFEMKI 80
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 39.1 bits (87), Expect = 0.029
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 434 CGEGSKTWDRFQMRI 448
Score = 34.3 bits (75), Expect = 0.83
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2
Query: 230 LINGAKKQKLRVKGPVRMP 286
LI KKQKL+VKGPVRMP
Sbjct: 403 LIQRGKKQKLKVKGPVRMP 421
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 37.9 bits (84), Expect = 0.067
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRF+MRI
Sbjct: 74 CGEGSKTWDRFEMRI 88
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 34.7 bits (76), Expect = 0.63
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 146 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
QA +IRI L S ++ C ++ AK + RV GPV +P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLP 77
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 176 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
R+ LTS N+ L+ VC +++ K+ +R+KGP +P
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLP 42
>UniRef50_Q5SV98 Cluster: Pleckstrin homology domain containing,
family N member 1; n=7; Theria|Rep: Pleckstrin homology
domain containing, family N member 1 - Homo sapiens
(Human)
Length = 611
Score = 33.1 bits (72), Expect = 1.9
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 508 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 561
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 562 PWLPLTD----GRSPRRSRDPGYDH 582
>UniRef50_Q494U2 Cluster: PLEKHN1 protein; n=5; Eutheria|Rep:
PLEKHN1 protein - Homo sapiens (Human)
Length = 576
Score = 33.1 bits (72), Expect = 1.9
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 473 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 526
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 527 PWLPLTD----GRSPRRSRDPGYDH 547
>UniRef50_Q0USN9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 224
Score = 32.3 bits (70), Expect = 3.3
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 85 PEFNKQHGSRC-SVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQWSQETEAA 261
P FN + G+ + E+PG+ + H Q A +C P QW+
Sbjct: 16 PTFNARGGTFAGNASTSSGESPGQS-----NASHDNGVQAVAALINICLPFQWTTNPLHN 70
Query: 262 CKGPSPHANQDPAYHHP 312
GP PH++ AY+ P
Sbjct: 71 SSGPLPHSSGPAAYNQP 87
>UniRef50_A0YLG8 Cluster: Gamma-butyrobetaine hydroxylase; n=1;
Lyngbya sp. PCC 8106|Rep: Gamma-butyrobetaine
hydroxylase - Lyngbya sp. PCC 8106
Length = 358
Score = 31.9 bits (69), Expect = 4.4
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 64 LKSCLSR--PEFNKQHGSRCSVRQRHRET---PGR-GLPYPPHQDHSYFSQCALAREGLC 225
L+S LS P FN +G+ + R + T P R G P PPH D SY+ L C
Sbjct: 143 LESFLSSIGPIFNADYGTIMPLETRDKTTESLPSRDGCPLPPHHDLSYWGGHRLVEFLYC 202
Query: 226 *PNQ 237
NQ
Sbjct: 203 VENQ 206
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 31.9 bits (69), Expect = 4.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
+ RI L+ N R L+++C+ + A K + + GPV +P
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLP 45
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 31.5 bits (68), Expect = 5.8
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKV 220
KD + IH+IRITL S NV+SLEK+
Sbjct: 4 KDRKNTHGAGGGIHQIRITLISCNVKSLEKM 34
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 31.5 bits (68), Expect = 5.8
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRV 265
E P+ S + R+R L ++ +R++ + A +NG K Q++ +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSI 184
>UniRef50_A2TXB8 Cluster: Putative uncharacterized protein; n=2;
Polaribacter|Rep: Putative uncharacterized protein -
Polaribacter dokdonensis MED152
Length = 115
Score = 31.5 bits (68), Expect = 5.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 18 T*NVRFLRFSAEQFLIEKLFISAGIQQATWQPL 116
T NV FL++S L + S ++Q TWQP+
Sbjct: 53 TFNVAFLKYSGISLLAALVLTSISVEQLTWQPM 85
>UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 215
Score = 31.5 bits (68), Expect = 5.8
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = -3
Query: 276 TGPFTRSFCFLAPLIRSAQTFSSERTLREVRVILMRWIGETSAWGFSMSLPDTTAAAM 103
TG RSF LA RSAQ+F +E T RE+ L+ S+ GF++ + T A M
Sbjct: 107 TGGTPRSFTTLA---RSAQSFGNETTRREIHASLLM---ACSSAGFTLLVTGLTLARM 158
>UniRef50_Q494U1 Cluster: Pleckstrin homology domain-containing
family N member 1; n=6; Eutheria|Rep: Pleckstrin
homology domain-containing family N member 1 - Homo
sapiens (Human)
Length = 663
Score = 31.5 bits (68), Expect = 5.8
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 560 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSEP- 614
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 615 -WLPLTD----GRSPRRSRDPGYDH 634
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 31.5 bits (68), Expect = 5.8
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 161 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
P+ RI RI + N S++ + D+ AKK ++V+GP+ +P
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLP 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,246,429
Number of Sequences: 1657284
Number of extensions: 7884854
Number of successful extensions: 19866
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19859
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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