Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M06
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   4.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   7.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   7.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   9.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   9.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   9.8  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 5/20 (25%), Positives = 15/20 (75%)
 Frame = +2

Query: 128 KDIEKPQAEVSPIHRIRITL 187
           +++EK + ++S +H+  +T+
Sbjct: 92  REVEKAKRDLSSVHKTTLTI 111


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 157 LPYPPHQDHSYFSQCALAR 213
           LPYP +  +SY    +LA+
Sbjct: 36  LPYPQNYINSYLFSLSLAQ 54


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 316 NSCGEGSKTWDRFQMRI 366
           N+CGE    W R Q +I
Sbjct: 69  NTCGEVFSAWVRCQDQI 85


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 185 LTSRNVRSLEKVCADL 232
           L ++N   L+ VCADL
Sbjct: 183 LKAQNSNLLKSVCADL 198


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 284 ACGLGPLHAASVS 246
           +CG  P+HA  +S
Sbjct: 348 SCGYDPMHAQELS 360


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 257 LRVKGPVRMP 286
           +RVK P+RMP
Sbjct: 1   MRVKHPLRMP 10


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 257 LRVKGPVRMP 286
           +RVK P+RMP
Sbjct: 1   MRVKHPLRMP 10


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,368
Number of Sequences: 336
Number of extensions: 1959
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)