Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M06
         (386 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    26   0.42 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    22   9.0  
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    22   9.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   9.0  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    22   9.0  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -2

Query: 358 SENDPRFLNLHHXSFT---GGDTQDLGWHADWALYTQLLFLGSID*VST 221
           +E +P F   H  SF+   G  T  + W + W++++     G+I   ST
Sbjct: 175 AELEPNFTPSHPVSFSEGIGNRTLYMSWPSSWSVFSSASQRGAISFAST 223


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 139 ETPGRGLPYPPHQDHSYFSQCALAR 213
           E PG  +P  PH   SY S   + +
Sbjct: 360 EMPGMSVPPQPHTHPSYGSPAEIPK 384


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 106 GSRCSVRQRHRETPGRGLPYPP 171
           G+ CS     R  P R   YPP
Sbjct: 22  GANCSTITTQRPAPRRDGQYPP 43


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEK 217
           KD+EKP+ E     +   TLT    + ++K
Sbjct: 284 KDLEKPKTEAVEYLKQENTLTRTRNQQIQK 313


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 106 GSRCSVRQRHRETPGRGLPYPP 171
           G+ CS     R  P R   YPP
Sbjct: 22  GADCSTTTTQRPAPRRDGQYPP 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,456
Number of Sequences: 2352
Number of extensions: 8445
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)