Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M06
(386 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 77 2e-14
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 77 2e-14
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 77 2e-14
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 77 2e-14
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 39 0.005
BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein. 33 0.32
AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology dom... 33 0.32
BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein. 31 0.98
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 31 1.7
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 31 1.7
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 28 9.1
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 28 9.1
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 70 CGEGSKTWDRFQMRI 84
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 70 CGEGSKTWDRFQMRI 84
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 70 CGEGSKTWDRFQMRI 84
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/54 (72%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMP
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMP 57
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 70 CGEGSKTWDRFQMRI 84
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 20 CGEGSKTWDRFQMRI 34
>BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein.
Length = 576
Score = 33.1 bits (72), Expect = 0.32
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 473 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 526
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 527 PWLPLTD----GRSPRRSRDPGYDH 547
>AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology domain
containing, family N member 1 protein.
Length = 611
Score = 33.1 bits (72), Expect = 0.32
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 508 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 561
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 562 PWLPLTD----GRSPRRSRDPGYDH 582
>BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein.
Length = 663
Score = 31.5 bits (68), Expect = 0.98
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PN 234
+SC S P +K+ + QRHR + G P PP S AREG P
Sbjct: 560 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSEP- 614
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 615 -WLPLTD----GRSPRRSRDPGYDH 634
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 67 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALAREGL 222
+ +S E + +G R SV QRHR TP R + P +D SY + A EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 67 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALAREGL 222
+ +S E + +G R SV QRHR TP R + P +D SY + A EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = -3
Query: 231 RSAQTFSSERTLREVRVILMRWIGETSAWGFSMSLPDTTAAAMLLVE 91
R Q R+ +L+ W+ E F +LPD T A L++
Sbjct: 4749 RLEQALKQAEVFRDTVHMLLEWLSEAEQLRFRGALPDDTEALQSLID 4795
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 172 HQDHSYFSQCALAREGLC*PNQWSQETEAACKGPSPHANQDPA 300
++D YF AL + + T+ AC PSPH + A
Sbjct: 65 YEDRPYFQSAALQSGRMTAADSGQPGTQEACGQPSPHGSHSHA 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,309,408
Number of Sequences: 237096
Number of extensions: 1314300
Number of successful extensions: 3079
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3079
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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