Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M06
(386 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal ... 87 1e-17
AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p pro... 87 1e-17
AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-P... 87 1e-17
AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p pro... 82 3e-16
AY075183-1|AAL68053.1| 388|Drosophila melanogaster AT13019p pro... 27 6.4
AE013599-3908|AAF47233.2| 388|Drosophila melanogaster CG4681-PA... 27 6.4
BT022291-1|AAY54707.1| 336|Drosophila melanogaster IP08195p pro... 27 8.5
AE014296-1731|AAF50208.2| 213|Drosophila melanogaster CG32044-P... 27 8.5
>Y11119-1|CAA72004.1| 120|Drosophila melanogaster S20 ribosomal
protein protein.
Length = 120
Score = 86.6 bits (205), Expect = 1e-17
Identities = 42/54 (77%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMP
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMP 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 72 CGEGSKTWDRFQMRI 86
>AY071742-1|AAL49364.1| 120|Drosophila melanogaster RH47995p
protein.
Length = 120
Score = 86.6 bits (205), Expect = 1e-17
Identities = 42/54 (77%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMP
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMP 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 72 CGEGSKTWDRFQMRI 86
>AE014297-2870|AAF55809.1| 120|Drosophila melanogaster CG15693-PA
protein.
Length = 120
Score = 86.6 bits (205), Expect = 1e-17
Identities = 42/54 (77%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMP
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMP 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 72 CGEGSKTWDRFQMRI 86
>AY071353-1|AAL48975.1| 120|Drosophila melanogaster RE38972p
protein.
Length = 120
Score = 81.8 bits (193), Expect = 3e-16
Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
KDIEKP + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMP
Sbjct: 6 KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMP 59
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 322 CGEGSKTWDRFQMRI 366
CGEGSKTWDRFQMRI
Sbjct: 72 CGEGSKTWDRFQMRI 86
>AY075183-1|AAL68053.1| 388|Drosophila melanogaster AT13019p
protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQ 253
K + + Q + HR + L +R+L++ DL+N KKQ
Sbjct: 310 KLLREEQRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKKQ 351
>AE013599-3908|AAF47233.2| 388|Drosophila melanogaster CG4681-PA
protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQ 253
K + + Q + HR + L +R+L++ DL+N KKQ
Sbjct: 310 KLLREEQRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKKQ 351
>BT022291-1|AAY54707.1| 336|Drosophila melanogaster IP08195p
protein.
Length = 336
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +1
Query: 112 RCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQ-WSQET---EAACKGPSP 279
+C RQ P L P Q H AL+ E L + W Q T E GPS
Sbjct: 3 KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 59
Query: 280 HANQDPAYH 306
H ++P Y+
Sbjct: 60 HQEEEPFYY 68
>AE014296-1731|AAF50208.2| 213|Drosophila melanogaster CG32044-PA
protein.
Length = 213
Score = 27.1 bits (57), Expect = 8.5
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +1
Query: 112 RCSVRQRHRETPGRGLPYPPHQDHSYFSQCALAREGLC*PNQ-WSQET---EAACKGPSP 279
+C RQ P L P Q H AL+ E L + W Q T E GPS
Sbjct: 38 KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 94
Query: 280 HANQDPAYH 306
H ++P Y+
Sbjct: 95 HQEEEPFYY 103
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,737,904
Number of Sequences: 53049
Number of extensions: 387897
Number of successful extensions: 1128
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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