Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M05
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.033
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    28   0.077
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.13 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    26   0.24 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.95 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.033
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -3

Query: 394 YILLPSFFWCCFLYFTILILSICVTGSFPSAFGFLFRYNVL----FINFSFYRLSFRIFN 227
           ++L   +F+C F+ FT+ +L +     F  AF  +F  ++L    FI F+ + L     +
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF-IIFTMHLLFCCAFIFFNMHLLFLLCLD 200

Query: 226 YF 221
           YF
Sbjct: 201 YF 202



 Score = 29.1 bits (62), Expect = 0.033
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = -3

Query: 454 CHFIFN*GFISRFIFHRRFLYILLPSFFWCCFLYFTILILSICVTGSFPSAFGFL----- 290
           C + F   FI   IF    L++L    F+C F+ FT+ +L  C    F     FL     
Sbjct: 145 CIYYFYCAFI---IFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201

Query: 289 FRYNVLFINFSFYRLS-FRIF 230
           F  ++LF+   +Y  S F IF
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIF 222



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = -3

Query: 418 FIFHRRFLYILLPSFFWCCFLYFTILILSICVTGSFPSAFGFLFRYNVLFINFSFYRLSF 239
           F  H  FL  +   +F+  F+ FTI +L  CV       + F +     FI F+ + L  
Sbjct: 202 FTLHLLFLPCIY--YFYSAFIIFTIHLLFYCVLIILLCIYYFYY----AFILFTVHLLLL 255

Query: 238 RIFNYFCF 215
               YF +
Sbjct: 256 VCIYYFYY 263


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 361 FLYFTILILSICVTGSFPSAFGFLFRYNVLFINFSFYRLSFRIFNYF 221
           F +  ILIL+ C+T S  S +  +  Y     NF+   + F +FN F
Sbjct: 224 FGWTLILILAKCITSSLSSLYTCIAGYE-FNANFTISYILFALFNTF 269


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +2

Query: 233 DPETESVEAEVDEKNIVSEKKTKRGRKAAGDTNGQDENGKIEETAPKKGRKKNVEEPPVE 412
           + E    EAE ++K    E K K   K       +DE+ K E+   KK  K+   E    
Sbjct: 220 EKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEEL 279

Query: 413 NKS 421
           NK+
Sbjct: 280 NKT 282



 Score = 24.2 bits (50), Expect = 0.95
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 341 ENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSED 484
           E  + +E +  +  ++  EE   E+K  D+P +ED     +E+   ED
Sbjct: 216 EKEREKELSDDEAEEEKKEEEG-EDKDKDKPKIEDVGEDEDEDTKKED 262


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
 Frame = +2

Query: 263 VDEKNIVSEKKTKRGRKAAGDTNG-----QDENGKIEETAPKKGRKKNVEE 400
           V   ++   K++KR ++  GDTNG      D+N  +E +  +  +  + +E
Sbjct: 66  VQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDE 116


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 341 ENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSETNGHIEEEQ 520
           ++ + E    K+ ++  ++E  +     ++ SV+ E+ + ++     DG + +G  EEE 
Sbjct: 35  DDARFETLVVKQTKQSVLDEARLR---ANDSSVDPEIDIEDKPAQKIDGEDDSGLTEEEV 91

Query: 521 VPS 529
           V S
Sbjct: 92  VLS 94


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = +2

Query: 605 KQEIEDEVEDKP 640
           K+E+++E+ED+P
Sbjct: 214 KKEVKEEIEDEP 225


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 14/58 (24%), Positives = 23/58 (39%)
 Frame = +2

Query: 326 TNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSETN 499
           ++G D+ G  +E    K      +E       T+E S   ++  SEE +     S  N
Sbjct: 6   SSGGDDLGSTDEVKVFKDEGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSNKN 63


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 301 FGFLFRYNVLFINFSFYRLSF 239
           F F ++YN  + N++ Y+  F
Sbjct: 211 FNFNYQYNQAYSNYNNYQEGF 231


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 301 FGFLFRYNVLFINFSFYRLSF 239
           F F ++YN  + N++ Y+  F
Sbjct: 231 FNFNYQYNQAYSNYNNYQEGF 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,137
Number of Sequences: 336
Number of extensions: 2149
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)