Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M04
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303585-1|AAO32941.1| 959|Homo sapiens NCOR isoform c protein. 32 2.0
AF087856-1|AAP97166.1| 2343|Homo sapiens nuclear receptor co-rep... 32 2.0
AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor co-rep... 32 2.0
AB019524-1|BAA75814.1| 1467|Homo sapiens nuclear receptor co-rep... 32 2.0
X98265-1|CAA66918.1| 611|Homo sapiens M-phase phosphoprotein 4 ... 31 2.6
X98264-1|CAA66917.1| 440|Homo sapiens M-phase phosphoprotein 4 ... 31 2.6
U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein. 31 2.6
BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein. 31 2.6
AJ271746-1|CAC01406.1| 690|Homo sapiens double-stranded RNA bin... 31 2.6
AJ271745-1|CAC01405.1| 702|Homo sapiens double-stranded RNA bin... 31 2.6
AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein. 31 2.6
AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein pr... 31 2.6
AF320244-1|AAK07424.1| 702|Homo sapiens 90 kDa NFAR protein pro... 31 2.6
AF202445-3|AAF82686.1| 515|Homo sapiens dsRNA binding protein N... 31 2.6
AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein N... 31 2.6
AF202445-1|AAF82687.1| 576|Homo sapiens dsRNA binding protein T... 31 2.6
AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associat... 31 2.6
AF167569-1|AAD51098.1| 702|Homo sapiens nuclear factor associat... 31 2.6
AF147209-1|AAD33966.1| 702|Homo sapiens double-stranded RNA-bin... 31 2.6
AF141870-1|AAD37575.1| 764|Homo sapiens translational control p... 31 2.6
AB209062-1|BAD92299.1| 450|Homo sapiens interleukin enhancer bi... 31 2.6
BC022243-1|AAH22243.1| 937|Homo sapiens MGC22014 protein protein. 31 3.4
AC073263-1|AAX93057.1| 937|Homo sapiens unknown protein. 31 3.4
>AF303585-1|AAO32941.1| 959|Homo sapiens NCOR isoform c protein.
Length = 959
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 DFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD--KFTD 379
D + +R ++ + S + HR T S PA+ PP EKL + + K
Sbjct: 464 DKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQ--EKLQTYQPEVVKANQ 521
Query: 380 SESDADTAGESPLHRPEPRVE 442
+E+D E PLH P+ E
Sbjct: 522 AENDPTRQYEGPLHHYRPQQE 542
>AF087856-1|AAP97166.1| 2343|Homo sapiens nuclear receptor
co-repressor protein.
Length = 2343
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 DFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD--KFTD 379
D + +R ++ + S + HR T S PA+ PP EKL + + K
Sbjct: 1848 DKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQ--EKLQTYQPEVVKANQ 1905
Query: 380 SESDADTAGESPLHRPEPRVE 442
+E+D E PLH P+ E
Sbjct: 1906 AENDPTRQYEGPLHHYRPQQE 1926
>AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor
co-repressor N-CoR protein.
Length = 2440
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 DFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD--KFTD 379
D + +R ++ + S + HR T S PA+ PP EKL + + K
Sbjct: 1944 DKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQ--EKLQTYQPEVVKANQ 2001
Query: 380 SESDADTAGESPLHRPEPRVE 442
+E+D E PLH P+ E
Sbjct: 2002 AENDPTRQYEGPLHHYRPQQE 2022
>AB019524-1|BAA75814.1| 1467|Homo sapiens nuclear receptor
co-repressor protein.
Length = 1467
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 DFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD--KFTD 379
D + +R ++ + S + HR T S PA+ PP EKL + + K
Sbjct: 971 DKDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQ--EKLQTYQPEVVKANQ 1028
Query: 380 SESDADTAGESPLHRPEPRVE 442
+E+D E PLH P+ E
Sbjct: 1029 AENDPTRQYEGPLHHYRPQQE 1049
>X98265-1|CAA66918.1| 611|Homo sapiens M-phase phosphoprotein 4
protein.
Length = 611
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>X98264-1|CAA66917.1| 440|Homo sapiens M-phase phosphoprotein 4
protein.
Length = 440
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>U10324-1|AAA20994.1| 671|Homo sapiens NF90 protein protein.
Length = 671
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 297 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 354
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 355 DYTVQIPPSTTYAITPMKRP 374
>BC064836-1|AAH64836.1| 706|Homo sapiens ILF3 protein protein.
Length = 706
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AJ271746-1|CAC01406.1| 690|Homo sapiens double-stranded RNA
binding nuclear protein DRBP76 delta protein.
Length = 690
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AJ271745-1|CAC01405.1| 702|Homo sapiens double-stranded RNA
binding nuclear protein DRBP76 protein.
Length = 702
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AJ271744-1|CAC01404.1| 564|Homo sapiens DRBP76 alpha protein.
Length = 564
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 162 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 219
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 220 DYTVQIPPSTTYAITPMKRP 239
>AF320247-1|AAK07425.1| 894|Homo sapiens 110 kDa NFAR protein
protein.
Length = 894
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AF320244-1|AAK07424.1| 702|Homo sapiens 90 kDa NFAR protein
protein.
Length = 702
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AF202445-3|AAF82686.1| 515|Homo sapiens dsRNA binding protein
NFAR-1/DRB76 protein.
Length = 515
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 109 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 166
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 167 DYTVQIPPSTTYAITPMKRP 186
>AF202445-2|AAF82685.1| 709|Homo sapiens dsRNA binding protein
NFAR-2/MPP4 protein.
Length = 709
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 109 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 166
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 167 DYTVQIPPSTTYAITPMKRP 186
>AF202445-1|AAF82687.1| 576|Homo sapiens dsRNA binding protein
TCP-80 isoform protein.
Length = 576
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 109 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 166
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 167 DYTVQIPPSTTYAITPMKRP 186
>AF167570-1|AAD51099.1| 894|Homo sapiens nuclear factor associated
with dsRNA NFAR-2 protein.
Length = 894
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AF167569-1|AAD51098.1| 702|Homo sapiens nuclear factor associated
with dsRNA NFAR-1 protein.
Length = 702
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AF147209-1|AAD33966.1| 702|Homo sapiens double-stranded
RNA-binding nuclear protein DRBP76 protein.
Length = 702
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AF141870-1|AAD37575.1| 764|Homo sapiens translational control
protein 80 protein.
Length = 764
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 296 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 353
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 354 DYTVQIPPSTTYAITPMKRP 373
>AB209062-1|BAD92299.1| 450|Homo sapiens interleukin enhancer
binding factor 3 isoform c variant protein.
Length = 450
Score = 31.5 bits (68), Expect = 2.6
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +2
Query: 188 DQDSTDDFEHLDRETKQDPADSPVHHHRVATQSFLEMERGPAAEHRPPSVAEKLMDHMAD 367
++++TD HLDR+ ++D S H R+A +F ++ + + P + +K +
Sbjct: 305 EKEATDAIGHLDRQQREDITQSAQHALRLA--AFGQLHKVLGMDPLPSKMPKKPKNENPV 362
Query: 368 KFTDSESDADTAGESPLHRP 427
+T + T +P+ RP
Sbjct: 363 DYTVQIPPSTTYAITPMKRP 382
>BC022243-1|AAH22243.1| 937|Homo sapiens MGC22014 protein protein.
Length = 937
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 250 FTGTPSSRG--HSEFLGDGTWARSGTSAAFRRR 342
+ G PSS S+FLG G W SG+S +F ++
Sbjct: 428 YYGFPSSNPVFPSQFLGPGAWGHSGSSGSFEKK 460
>AC073263-1|AAX93057.1| 937|Homo sapiens unknown protein.
Length = 937
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 250 FTGTPSSRG--HSEFLGDGTWARSGTSAAFRRR 342
+ G PSS S+FLG G W SG+S +F ++
Sbjct: 428 YYGFPSSNPVFPSQFLGPGAWGHSGSSGSFEKK 460
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,727,346
Number of Sequences: 237096
Number of extensions: 1857088
Number of successful extensions: 5723
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5720
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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