Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_M03
(433 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 85 8e-16
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 73 2e-12
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 62 6e-09
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 61 8e-09
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 58 6e-08
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 55 7e-07
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 49 5e-05
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 46 3e-04
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 40 0.017
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.16
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 36 0.36
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 33 2.6
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 33 3.4
UniRef50_Q97N10 Cluster: Distantly related to cell wall-associat... 32 4.5
UniRef50_Q7NBF8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.5
UniRef50_Q06147 Cluster: Sphingoid long chain base kinase 5; n=2... 32 4.5
UniRef50_A0Q086 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_A0EBY6 Cluster: Chromosome undetermined scaffold_89, wh... 31 7.8
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 84.6 bits (200), Expect = 8e-16
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 226 YHQKMKVNLRNHYKNKKYKPLXFKSQE 306
+Q K NLR YK KKYKPL + ++
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKK 87
Score = 54.8 bits (126), Expect = 7e-07
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
R KKTRAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 84 RPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 73.3 bits (172), Expect = 2e-12
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 226 YHQKMKVNLRNHYKNKKYKPLXFK 297
+Q K LR Y + KYKP+ +
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLR 84
Score = 36.3 bits (80), Expect = 0.28
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
R KKTRA+R+ LT HE +++ K+ K R +AVKA
Sbjct: 84 RLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 61.7 bits (143), Expect = 6e-09
Identities = 36/86 (41%), Positives = 45/86 (52%)
Frame = +1
Query: 46 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 226 YHQKMKVNLRNHYKNKKYKPLXFKSQ 303
Y+QK K+ LR YKNKK+KP + +
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKK 85
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 61.3 bits (142), Expect = 8e-09
Identities = 33/84 (39%), Positives = 45/84 (53%)
Frame = +1
Query: 55 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 234
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 235 KMKVNLRNHYKNKKYKPLXFKSQE 306
K + NLR YK K PL ++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKK 160
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 58.4 bits (135), Expect = 6e-08
Identities = 36/113 (31%), Positives = 52/113 (46%)
Frame = +1
Query: 52 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 231
KVK +L K + LRV K+ G +SK +I VRK+IARV V +
Sbjct: 66 KVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARVLTVIN 125
Query: 232 QKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSKDQDEERDQKEISLP 390
+ LR YKNKKY PL + + + + + E++ +KEI P
Sbjct: 126 ANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFP 178
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 412
R + TRA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 147 RPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 54.8 bits (126), Expect = 7e-07
Identities = 31/82 (37%), Positives = 40/82 (48%)
Frame = +1
Query: 52 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 231
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 232 QKMKVNLRNHYKNKKYKPLXFK 297
Q+ K R YK PL +
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLR 103
Score = 34.3 bits (75), Expect = 1.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
R K TRA RK LT + +KT KE ++ P R YA+ A
Sbjct: 103 RPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 48.8 bits (111), Expect = 5e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +1
Query: 55 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 234
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 235 KMKVNLRNHYKNKKYK 282
+ NL+ Y ++K +
Sbjct: 65 NERSNLKMFYADRKLR 80
Score = 36.7 bits (81), Expect = 0.21
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 412
R K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 88 RTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 46.0 bits (104), Expect = 3e-04
Identities = 25/86 (29%), Positives = 44/86 (51%)
Frame = +1
Query: 133 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDP 312
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PL + +
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 313 CYAQGSY*TRSKDQDEERDQKEISLP 390
+ ++K + +K ++ P
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFP 118
Score = 35.1 bits (77), Expect = 0.64
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
R K TRA R+ALT +AK T K +K FP R +A+ A
Sbjct: 87 RKKLTRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 40.3 bits (90), Expect = 0.017
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
R KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 61 RPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.16
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +1
Query: 136 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFK 297
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL K
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSK 64
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 35.9 bits (79), Expect = 0.36
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +1
Query: 40 VKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVY 219
V M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+ Y
Sbjct: 106 VAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALREAY 164
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 400
R KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 6 RPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 32.7 bits (71), Expect = 3.4
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +2
Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 406
R K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 83 RPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q97N10 Cluster: Distantly related to cell wall-associated
hydrolases, similar to yycO Bacillus subtilis; n=2;
Clostridium acetobutylicum|Rep: Distantly related to
cell wall-associated hydrolases, similar to yycO
Bacillus subtilis - Clostridium acetobutylicum
Length = 233
Score = 32.3 bits (70), Expect = 4.5
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 130 TNLRVAKVTGGVA-SKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQE 306
TN++ VT G+ ++ + ++ + I Y + K K + N YKNK K F S++
Sbjct: 22 TNVKAYAVTNGMTGNERNVLKQYQSNIDNTYNSFGDKKKTKVVNDYKNKVKKAQRFISRD 81
Query: 307 -DPCYAQGSY*TRS 345
D Y G Y TRS
Sbjct: 82 TDENY--GDYPTRS 93
>UniRef50_Q7NBF8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma gallisepticum|Rep: Putative uncharacterized
protein - Mycoplasma gallisepticum
Length = 1931
Score = 32.3 bits (70), Expect = 4.5
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 172 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSKD 351
K SKI ++R I Y Q+ ++ L +KN + + K+QE+ + Q + + +K
Sbjct: 1353 KSSKIALLRSKIYNTYKQQQQQKQILLEEKHKNSQLRKSLLKTQEE-LHQQKAQFSIAKK 1411
Query: 352 QDEE--RDQKEI 381
Q+E+ ++QK++
Sbjct: 1412 QEEKKLKNQKDL 1423
>UniRef50_Q06147 Cluster: Sphingoid long chain base kinase 5; n=2;
Saccharomyces cerevisiae|Rep: Sphingoid long chain base
kinase 5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 687
Score = 32.3 bits (70), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +1
Query: 196 RKAIARVYIVYHQKMKVNLRNHY---KNK---KYKPLXFKSQEDPC---YAQGSY*TRSK 348
+K +Y+ Y K K L+NHY KNK +++ + + C + Y T ++
Sbjct: 453 KKYPCEIYVKYAAKSKNELKNHYLEHKNKGSLEFQHITMNKDNEDCDNYNYENEYETENE 512
Query: 349 DQDEERD 369
D+DE+ D
Sbjct: 513 DEDEDAD 519
>UniRef50_A0Q086 Cluster: Putative uncharacterized protein; n=1;
Clostridium novyi NT|Rep: Putative uncharacterized
protein - Clostridium novyi (strain NT)
Length = 138
Score = 31.9 bits (69), Expect = 5.9
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 187 RVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPC 315
+++ K+ + +YI+ KMK NL+N + KY+ + K +E+PC
Sbjct: 30 KLLNKSKSNLYIMTSSKMK-NLKNKNYDIKYEKIIGKIKENPC 71
>UniRef50_A0EBY6 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 822
Score = 31.5 bits (68), Expect = 7.8
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +1
Query: 172 KLSKIRV-VRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKSQEDPCYAQGSY*TRSK 348
+L +++V +++ ++ + Y++K+K + N Y + + L FK DP Y + + T ++
Sbjct: 235 ELKQLKVKCKESESKATMYYNEKLKKDKLNQYLKNQIESLKFK---DPEYKKQNKITENE 291
Query: 349 DQ-DEERDQKEISLPT 393
Q ++ DQK++ + T
Sbjct: 292 QQLKQDIDQKQVQIDT 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,944,470
Number of Sequences: 1657284
Number of extensions: 4598960
Number of successful extensions: 13395
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13385
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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