Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_M03
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   103   1e-22
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   103   1e-22
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   102   2e-22
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   0.88 
AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p pro...    28   4.7  
AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB...    28   4.7  
AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA...    28   4.7  

>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  103 bits (247), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = +1

Query: 46  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 226 YHQKMKVNLRNHYKNKKYKPLXFKSQE 306
            HQK K NLR  +KNKKYKPL  + ++
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKK 87



 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +2

Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
           R KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 84  RKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  103 bits (247), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = +1

Query: 46  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 226 YHQKMKVNLRNHYKNKKYKPLXFKSQE 306
            HQK K NLR  +KNKKYKPL  + ++
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKK 87



 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +2

Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
           R KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 84  RKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  102 bits (245), Expect = 2e-22
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = +1

Query: 46  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 225
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60

Query: 226 YHQKMKVNLRNHYKNKKYKPLXFKSQE 306
            HQK K NLR  +KNKKYKPL  + ++
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKK 87



 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +2

Query: 296 RAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 415
           R KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 84  RKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 421 YSSFNGIDSRWEERFLSDLFPRLDLCFV 338
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


>AY075535-1|AAL68342.1|  404|Drosophila melanogaster RH07911p
           protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 199 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKS 300
           +A +++ +  H   K N+ +H+K K+Y PL F++
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRN 98


>AE014135-209|ABC65833.1|  404|Drosophila melanogaster CG17471-PB,
           isoform B protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 199 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKS 300
           +A +++ +  H   K N+ +H+K K+Y PL F++
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRN 98


>AE014135-208|ABC65832.1|  404|Drosophila melanogaster CG17471-PA,
           isoform A protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 199 KAIARVYIVYHQKMKVNLRNHYKNKKYKPLXFKS 300
           +A +++ +  H   K N+ +H+K K+Y PL F++
Sbjct: 65  RAYSKIKVDNHLFNKENMPSHFKVKEYCPLVFRN 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,683,965
Number of Sequences: 53049
Number of extensions: 216919
Number of successful extensions: 947
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)