Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_L23
(625 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49056| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-06) 180 6e-46
SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21) 52 5e-07
SB_53416| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21) 39 0.004
SB_51927| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21) 39 0.004
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 30 1.3
SB_55371| Best HMM Match : Acetyltransf_1 (HMM E-Value=7.8e-09) 29 2.3
SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23) 29 2.3
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 2.3
SB_6212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 27 9.4
>SB_49056| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-06)
Length = 118
Score = 180 bits (439), Expect = 6e-46
Identities = 85/117 (72%), Positives = 99/117 (84%), Gaps = 2/117 (1%)
Frame = +2
Query: 281 MGKAEGHG--ENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNK 454
MGKAEG E WHGHVTA++V+P++RRLGLAA LM+ LE +SE K+ +FVDLFVRVSNK
Sbjct: 1 MGKAEGSEAQEQWHGHVTAVSVAPEFRRLGLAAKLMSSLENISEIKEGFFVDLFVRVSNK 60
Query: 455 VAINMYKNLGYIVYRTVLEYYSGDPDEDAYDMRKACSRDINKQSVIPLSHPVRTXDV 625
VA+ MYK LGY+VYRTVLEYYSGDPDEDAYDMRKA SRD +K+SVIPL PVR D+
Sbjct: 61 VAVAMYKQLGYVVYRTVLEYYSGDPDEDAYDMRKALSRDKDKKSVIPLKEPVRPEDI 117
>SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21)
Length = 259
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 176 LTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEGHGENWH-GHVTALTVSPDY 352
L+E Y + Y ++ +WP + + +G I+ K + H H G++ L V D+
Sbjct: 132 LSEPYSIYTYRYFIHNWPNLC-FLAMYKDQCVGAIVCKLDVHKSMVHRGYIAMLAVEKDF 190
Query: 353 RRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYIVYRTVLEYYSGDPD 532
RR + L+ + V L ++NK A+ +Y+NLG++ + + YY D
Sbjct: 191 RRHKIGTALVKKAIRAMIEDNCDEVVLETEITNKAALRLYENLGFVRDKRLFRYYLNGVD 250
>SB_53416| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)
Length = 209
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +2
Query: 236 FQVVESPSGEIMGYIMGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKK 415
F VVE + E+ G++ H + + LTV+P+YRR G+A +L + + + K
Sbjct: 105 FWVVER-NNEVAGFV---GVVHRDTSTIELQRLTVAPEYRRQGIAESLCRYVIALYAEMK 160
Query: 416 AYFVDLFVRVSNKVAINMYKNLGYIVYRTVLEYYS 520
+ L S+ A N+Y+ LG+ + V + Y+
Sbjct: 161 LLRLRLECTESHDAAKNLYRKLGFTLTDCVTDPYA 195
>SB_51927| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-21)
Length = 238
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +2
Query: 236 FQVVESPSGEIMGYIMGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKK 415
F VVE + E+ G++ H + + LTV+P+YRR G+A +L + + + K
Sbjct: 134 FWVVER-NNEVAGFV---GVVHRDTSTIELQRLTVAPEYRRQGIAESLCRYVIALYAEMK 189
Query: 416 AYFVDLFVRVSNKVAINMYKNLGYIVYRTVLEYYS 520
+ L S+ A N+Y+ LG+ + V + Y+
Sbjct: 190 LLRLRLECTESHDAAKNLYRKLGFTLTDCVTDPYA 224
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/114 (22%), Positives = 48/114 (42%)
Frame = +2
Query: 140 DMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEGHGENWHG 319
D L NN+ + +++ L+ + + +VE+ + +G +GK +N
Sbjct: 607 DFLDGNNLTQELSRDSFALNGHNVTYIYRSNGTFLVEAMASNPLGSFLGKCYIFVQNPVQ 666
Query: 320 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNL 481
VT T SP G L N+ + A ++ ++ + VAINM+ L
Sbjct: 667 GVTLTTNSPQIIPTGTIDYLFNVSVGTACPTNATIAMVYGQIDSLVAINMFSTL 720
>SB_55371| Best HMM Match : Acetyltransf_1 (HMM E-Value=7.8e-09)
Length = 95
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 299 HGENWHGHVTAL---TVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINM 469
H EN V L +VS RR G+A L+ L E + + + L + VA M
Sbjct: 6 HSENHPEEVAELQRMSVSSSVRRKGIARKLIFELLEFAREYGYRKIILTTSILQPVARTM 65
Query: 470 YKNLGYIVYR 499
Y+ LG+ V R
Sbjct: 66 YRKLGFQVVR 75
>SB_39776| Best HMM Match : Acetyltransf_1 (HMM E-Value=1e-23)
Length = 237
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 SGEIMGYI-MGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDL 433
+G+++G + + +E H + + ++VS RR G+A L+ L + ++ + L
Sbjct: 134 NGKVVGMVGLIHSENHPDGV-AELQRMSVSSSVRRKGIAGKLIRELLNFAREQNYKKIVL 192
Query: 434 FVRVSNKVAINMYKNLGY 487
+ AI MYK G+
Sbjct: 193 STTGAQHAAIGMYKKFGF 210
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 166 IHIVKSQHIFTRKRS*CCHFRFL 98
IH+VKS + +T CC+++FL
Sbjct: 735 IHVVKSSYNYTTSAGNCCNYKFL 757
>SB_6212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 320 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLG 484
+V + P YR G+ LM + E + V SNK AI+ YK+ G
Sbjct: 61 NVILVYTDPHYRGKGIGRALMKTVAETATANGIRQVMWTTAESNKSAISFYKSFG 115
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = +2
Query: 101 ETKMTTLRPF---TCEDMLRFNNVNLDPLT-ETY 190
E +++TL F TC LR+ +VN +PLT ETY
Sbjct: 180 ENRVSTLTEFSKLTCMSQLRYLSVNGNPLTRETY 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,621,629
Number of Sequences: 59808
Number of extensions: 331957
Number of successful extensions: 618
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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