Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_L23
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical ... 246 8e-66
AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical... 107 6e-24
AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical... 61 5e-10
U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z81052-3|CAB02871.1| 160|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical pr... 38 0.006
U40420-2|AAK84526.3| 245|Caenorhabditis elegans Hypothetical pr... 34 0.095
Z68014-9|CAI79184.1| 125|Caenorhabditis elegans Hypothetical pr... 30 1.2
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 4.7
>AC024878-1|AAK85513.1| 173|Caenorhabditis elegans Hypothetical
protein Y97E10AL.3 protein.
Length = 173
Score = 246 bits (603), Expect = 8e-66
Identities = 108/172 (62%), Positives = 137/172 (79%)
Frame = +2
Query: 110 MTTLRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGK 289
MTTLRPF DM +FNNVNLD TETYG FY Y+ ++PEY+QV E P+GEIM Y+MGK
Sbjct: 1 MTTLRPFDVMDMFKFNNVNLDINTETYGFQFYLHYMMNYPEYYQVAEHPNGEIMAYVMGK 60
Query: 290 AEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINM 469
EG NWHGHVTAL+V+P++RRLGLAA +M LE SE ++AYFVDLFVRVSNK+AI +
Sbjct: 61 IEGRDTNWHGHVTALSVAPNFRRLGLAAYMMEFLERTSEARRAYFVDLFVRVSNKIAIEL 120
Query: 470 YKNLGYIVYRTVLEYYSGDPDEDAYDMRKACSRDINKQSVIPLSHPVRTXDV 625
YK LGY+VYR ++ YY+GD DEDA+DMRK+ SRD K++++PL++ V + DV
Sbjct: 121 YKKLGYVVYRQIIGYYTGDRDEDAFDMRKSLSRDPEKKAMVPLNYLVHSRDV 172
>AF047659-11|AAC04428.1| 182|Caenorhabditis elegans Hypothetical
protein K07H8.3 protein.
Length = 182
Score = 107 bits (257), Expect = 6e-24
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Frame = +2
Query: 137 EDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGK-AEGHGENW 313
+D++ N NL L E Y + +Y + WP+ + E G ++GY++ K E GE
Sbjct: 9 DDLMSMQNANLMCLPENYQMKYYFYHALSWPQLSYIAEDHKGNVVGYVLAKMEEDPGEEP 68
Query: 314 HGHVTALTVSPDYRRLGLAATLMN-LLEEVSEKKKAYFVDLFVRVSNKVAINMYKN-LGY 487
HGH+T+L V YRRLGLA +M+ + E A +V L VRVSN+ A+N+YKN L +
Sbjct: 69 HGHITSLAVKRSYRRLGLANKMMDQTARAMVETYNAKYVSLHVRVSNRAALNLYKNTLKF 128
Query: 488 IVYRTVLEYYSGDPDEDAYDMRKACSRDINKQSVIPLSHPVRT 616
+ T +YY+ EDAY MR+ ++ ++++ P T
Sbjct: 129 EIVDTEPKYYA--DGEDAYAMRRDLAKWAEERNIEPADREAYT 169
>AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical
protein B0238.10 protein.
Length = 278
Score = 61.3 bits (142), Expect = 5e-10
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Frame = +2
Query: 176 LTETYGLSFYTQYLAHWPEY-FQVVESPSGEIMGYIMGKAE--GHGENWHGHVTALTVSP 346
L+E Y + Y +L +WPEY F + + +G ++ K E +G G++ L V
Sbjct: 117 LSEPYSIYTYRYFLHNWPEYCFLAYDQTNNTYIGAVLCKLELDMYGR-CKGYLAMLAVDE 175
Query: 347 DYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYIVYRTVLEYYSGD 526
RRLG+ L+ + + K + L VSNK A +Y NLG+I + +L+YY
Sbjct: 176 SCRRLGIGTRLVRRALDAMQSKGCDEIVLETEVSNKNAQRLYSNLGFIRQKRLLKYYLNG 235
Query: 527 PD 532
D
Sbjct: 236 GD 237
>U00067-6|AAL08037.1| 167|Caenorhabditis elegans Hypothetical
protein F54E7.9 protein.
Length = 167
Score = 54.4 bits (125), Expect = 6e-08
Identities = 33/100 (33%), Positives = 49/100 (49%)
Frame = +2
Query: 257 SGEIMGYIMGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLF 436
+GE + + K E ++ + V P +R GL + LM+ ++E + K L
Sbjct: 65 NGEAIAIVAVKPENFETGRVLYIRSFGVHPRHREAGLGSFLMDFVDEKGKLLKLPHAMLH 124
Query: 437 VRVSNKVAINMYKNLGYIVYRTVLEYYSGDPDEDAYDMRK 556
V+ SNK AI YKN G+ V V +YY DA+ MRK
Sbjct: 125 VQTSNKTAIEFYKNRGFNVDCLVPQYYQRCSPPDAFIMRK 164
>Z81052-3|CAB02871.1| 160|Caenorhabditis elegans Hypothetical
protein D2023.4 protein.
Length = 160
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 320 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYI 490
H+ L + P +RR+GLA TL L E++ K ++ V NK AI +Y + Y+
Sbjct: 80 HMEDLYIRPQFRRMGLARTLWKKLAELARDKGIVRLEWAVLDWNKNAIALYDTVDYV 136
>Z81073-6|CAN86904.2| 215|Caenorhabditis elegans Hypothetical
protein F30F8.10b protein.
Length = 215
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 320 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRV--SNKVAINMYKNLGYIV 493
++ ++ V +RRLGLA L+N L Y +F+ V +N A++ YK G+
Sbjct: 99 YILSIAVDKKFRRLGLATRLLNNLMSSLSDHPPYPRAVFLHVLSTNSAALSFYKMHGFEF 158
Query: 494 YRTVLEYY 517
+ ++ EYY
Sbjct: 159 HASLPEYY 166
>Z81073-5|CAE17804.3| 242|Caenorhabditis elegans Hypothetical
protein F30F8.10a protein.
Length = 242
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 320 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRV--SNKVAINMYKNLGYIV 493
++ ++ V +RRLGLA L+N L Y +F+ V +N A++ YK G+
Sbjct: 126 YILSIAVDKKFRRLGLATRLLNNLMSSLSDHPPYPRAVFLHVLSTNSAALSFYKMHGFEF 185
Query: 494 YRTVLEYY 517
+ ++ EYY
Sbjct: 186 HASLPEYY 193
>U40420-2|AAK84526.3| 245|Caenorhabditis elegans Hypothetical
protein F40F4.7 protein.
Length = 245
Score = 33.9 bits (74), Expect = 0.095
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Frame = +2
Query: 119 LRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEG 298
L T ++L+ +N D Y FY + A + + + ++G + + +
Sbjct: 98 LGEITPHNILQLKKLNEDVFPIAYNDKFYVE--ARYCGELGRLAYYNDVVVGAVCCRIDD 155
Query: 299 HGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEK-KKAYFVDLFVRVSNKVAINMYK 475
+ ++ L YR++G+ L++ ++ K ++ + L V+V+NK A+ Y+
Sbjct: 156 ISDEKSLYLMTLGTLAAYRQIGIGTILIDYALKLCNKMEEIKTMYLHVQVNNKNAVQFYE 215
Query: 476 NLGYIVYRTVLEYYSGDPDEDAY 544
G+ + +YY P DAY
Sbjct: 216 KHGFTNDGIIEDYYRISP-RDAY 237
>Z68014-9|CAI79184.1| 125|Caenorhabditis elegans Hypothetical
protein W04G3.12 protein.
Length = 125
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 431 LFVRVSNKVAINMYKNLGYIVYRTVLEYYSGDPDEDAYDMRKACSRDINKQSVIPLSHPV 610
+FV + N V+++ + G + L + P D Y + K+CS N+ VI +
Sbjct: 5 IFVIIINSVSVSECWDCGGGFFTRGLVFILASPSSDRYQINKSCSVHDNQYDVIEYYESI 64
Query: 611 R 613
R
Sbjct: 65 R 65
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 263 EIMGYIMGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVD 430
++MG + KA G+ ENW A TV+ D + + EV ++K V+
Sbjct: 729 DLMGSALEKAFGNQENWTDKSAAKTVTSDAITNAIETKFTGISREVLLEQKERLVE 784
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,621,054
Number of Sequences: 27780
Number of extensions: 251507
Number of successful extensions: 577
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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