Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L23
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.45 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   5.6  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   5.6  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   5.6  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   5.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.4  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 460 CYFIAHSYKQIHKICFFLFRYLF 392
           CYF AH     H++C F+   +F
Sbjct: 164 CYFTAHVTHPRHRLCVFVAGVVF 186


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 85  YKYNLRNENDNITTVYV*RYAE 150
           YKYN  N N N    Y   Y E
Sbjct: 95  YKYNYNNNNYNKKLYYNINYIE 116


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 85  YKYNLRNENDNITTVYV*RYAE 150
           YKYN  N N N    Y   Y E
Sbjct: 95  YKYNYNNNNYNKKLYYNINYIE 116


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 85  YKYNLRNENDNITTVYV*RYAE 150
           YKYN  N N N    Y   Y E
Sbjct: 95  YKYNYNNNNYNKKLYYNINYIE 116


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 85  YKYNLRNENDNITTVYV*RYAE 150
           YKYN  N N N    Y   Y E
Sbjct: 95  YKYNYNNNNYNKKLYYNINYIE 116


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 380 MNLLEEVSEKKKAYFVDLFV 439
           +++ ++V EKK+  F+DL +
Sbjct: 305 LDIDDDVGEKKRQAFLDLLI 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,513
Number of Sequences: 438
Number of extensions: 3232
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)