Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_L21
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 246 4e-64
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 228 8e-59
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 203 3e-51
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 176 3e-43
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 165 6e-40
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 142 5e-33
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 138 1e-31
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 137 2e-31
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 136 3e-31
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 130 2e-29
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 128 9e-29
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 102 7e-21
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 93 7e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 88 2e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 87 5e-16
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 2e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 1e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 63 5e-09
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 60 6e-08
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 59 8e-08
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 58 1e-07
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 58 2e-07
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 56 7e-07
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 54 4e-06
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 49 9e-05
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 48 1e-04
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 48 3e-04
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 46 8e-04
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 45 0.001
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.002
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.003
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.017
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 41 0.023
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 40 0.052
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 40 0.069
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 37 0.49
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 36 0.64
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 2.6
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.4
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 7.9
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 7.9
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 246 bits (602), Expect = 4e-64
Identities = 115/154 (74%), Positives = 136/154 (88%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
I R++T+++L+ VV KL+PDSIAKDIEKAC +Y
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVY 208
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2
Query: 89 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 229
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 228 bits (558), Expect = 8e-59
Identities = 113/161 (70%), Positives = 131/161 (81%)
Frame = +3
Query: 171 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 351 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 530
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 531 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IY
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIY 205
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 89 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 229
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 203 bits (496), Expect = 3e-51
Identities = 100/154 (64%), Positives = 121/154 (78%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
+T T+ +L+E+V K IP+SI ++IEKA IY
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIY 600
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 95 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 196
DPF +KDWYD+KAPS+F R VG TLV+RTQG +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 176 bits (429), Expect = 3e-43
Identities = 85/153 (55%), Positives = 113/153 (73%)
Frame = +3
Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 375 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 554
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 555 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
R+ + L+++ NKLIP+ I ++IEKA GIY
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIY 205
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 95 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 229
DPF RKDWY +KAP+ F+ R VG TLVNR+ G +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 165 bits (402), Expect = 6e-40
Identities = 82/142 (57%), Positives = 110/142 (77%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 552 ITRDVTNSELREVVNKLIPDSI 617
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +2
Query: 92 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGNENCFGRIEGKSF 229
VDPFTRK+WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 142 bits (345), Expect = 5e-33
Identities = 73/164 (44%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Frame = +3
Query: 171 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 351 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 521
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 522 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
RAIR+K+ IT + + E LI + K IEK I+
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIF 211
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 92 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 235
+DP +RK+WYD +AP FS + G TLV ++ GN I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 138 bits (333), Expect = 1e-31
Identities = 66/154 (42%), Positives = 103/154 (66%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
+ ++V+ + +++ +S+AK+I KA I+
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIF 204
Score = 36.3 bits (80), Expect = 0.64
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 92 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 223
+DP RK+W+++ AP F+ G T +N++ G I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 137 bits (332), Expect = 2e-31
Identities = 71/146 (48%), Positives = 99/146 (67%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDI 629
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 89 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 223
I +PF++K+WY+VK P F +R VG +VN+T G +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 136 bits (330), Expect = 3e-31
Identities = 66/125 (52%), Positives = 85/125 (68%)
Frame = +3
Query: 279 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 458
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 459 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 638
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 639 CHGIY 653
I+
Sbjct: 126 ASSIF 130
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 130 bits (315), Expect = 2e-29
Identities = 57/153 (37%), Positives = 99/153 (64%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 551
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
I R ++ +++E V+ L + ++ + + C+ I
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPI 207
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 95 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 235
+ RK+WYDV AP+ F KRQ T+ N+TQG + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 128 bits (310), Expect = 9e-29
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCE 548
V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 549 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
I+ D ++L+EV+NKL+PD++ KD+EKAC IY
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIY 188
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 102 bits (245), Expect = 7e-21
Identities = 51/139 (36%), Positives = 84/139 (60%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 579 LREVVNKLIPDSIAKDIEK 635
+++++ KL +++ K IE+
Sbjct: 133 VQKIMKKLANETVGKRIEE 151
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 92.7 bits (220), Expect = 7e-18
Identities = 46/150 (30%), Positives = 83/150 (55%)
Frame = +3
Query: 204 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 383
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 384 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 563
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 564 VTNSELREVVNKLIPDSIAKDIEKACHGIY 653
N ++++ ++++ I + IE C I+
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIF 201
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/136 (33%), Positives = 74/136 (54%)
Frame = +3
Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 375 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 554
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 555 TRDVTNSELREVVNKL 602
++ + +V KL
Sbjct: 173 HNELGKVSIPVLVTKL 188
Score = 39.9 bits (89), Expect = 0.052
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 95 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQG 190
DP+ +K+WY V AP+ F R +G T V +T G
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 86.6 bits (205), Expect = 5e-16
Identities = 48/152 (31%), Positives = 82/152 (53%)
Frame = +3
Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 375 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 554
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 555 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +3
Query: 171 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 351 LTTDKLRWMVKKWQTLIEANIDVKTTD 431
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 528 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 653
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IY
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIY 152
Score = 59.3 bits (137), Expect = 8e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 89 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 196
+VDPF++KDWYDV AP+MF+ R +G TLV RTQG +
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 171 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 351 LTTD 362
L+ D
Sbjct: 105 LSCD 108
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 92 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 229
VD ++KDWYD+KAP+MF+ R +G TLV RTQG + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 63.3 bits (147), Expect = 5e-09
Identities = 43/145 (29%), Positives = 73/145 (50%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 579 LREVVNKLIPDSIAKDIEKACHGIY 653
E +N+++ +A +I K IY
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIY 177
Score = 33.9 bits (74), Expect = 3.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 92 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 178
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 59.7 bits (138), Expect = 6e-08
Identities = 39/136 (28%), Positives = 69/136 (50%)
Frame = +3
Query: 222 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 401
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 402 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 581
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 582 REVVNKLIPDSIAKDI 629
+ + +++ ++A D+
Sbjct: 164 GQFLKEILEGTLAADL 179
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 59.3 bits (137), Expect = 8e-08
Identities = 44/145 (30%), Positives = 69/145 (47%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 579 LREVVNKLIPDSIAKDIEKACHGIY 653
E V +I D +++ K IY
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIY 182
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 58.4 bits (135), Expect = 1e-07
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Frame = +3
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 387 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 566
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 567 TNSELREVVNKLI----PDSIAKDIEKACHGIY 653
+ E + + + +SI + I++A IY
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIY 175
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 58.0 bits (134), Expect = 2e-07
Identities = 43/147 (29%), Positives = 75/147 (51%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 572
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 573 SELREVVNKLIPDSIAKDIEKACHGIY 653
++ + + I ++ I + IY
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIY 178
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 56.0 bits (129), Expect = 7e-07
Identities = 41/145 (28%), Positives = 68/145 (46%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 579 LREVVNKLIPDSIAKDIEKACHGIY 653
+ + + + + +I K IY
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIY 181
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 53.6 bits (123), Expect = 4e-06
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 572
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 573 SELREVVNKLI----PDSIAKDIEKACHGIY 653
S L E++ ++ S+A I+++ IY
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIY 179
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 49.2 bits (112), Expect = 9e-05
Identities = 38/147 (25%), Positives = 67/147 (45%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 572
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 573 SELREVVNKLIPDSIAKDIEKACHGIY 653
+ E V+ ++ + I C ++
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMF 184
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 575
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 576 ELREVVNKLIPDSIAKDI 629
E V ++I ++A +I
Sbjct: 158 TFDEFVQEMIFGNLANNI 175
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 47.6 bits (108), Expect = 3e-04
Identities = 34/145 (23%), Positives = 65/145 (44%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 579 LREVVNKLIPDSIAKDIEKACHGIY 653
++++ ++ ++ I IY
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIY 175
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/137 (25%), Positives = 62/137 (45%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 579 LREVVNKLIPDSIAKDI 629
V+ ++ +++ I
Sbjct: 151 FESFVDAIVEGNLSSAI 167
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 45.2 bits (102), Expect = 0.001
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Frame = +3
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 387 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 563
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 564 VTNSELREVVNKLIPDSIAKDIEKACHGIY 653
++ V+ ++ ++K + C I+
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIF 181
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +3
Query: 201 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 380
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 381 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 473
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +3
Query: 216 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 395
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 396 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 494
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.017
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 89 IVDPFTRKDWYDVKAPSMFSKRQVGTT 169
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 41.1 bits (92), Expect = 0.023
Identities = 33/147 (22%), Positives = 66/147 (44%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 572
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 573 SELREVVNKLIPDSIAKDIEKACHGIY 653
E++ ++ +A ++ IY
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIY 179
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 39.9 bits (89), Expect = 0.052
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 594 NKLIPDSIAKDIEKACHGIY 653
NKLIPDSI KDIEKAC IY
Sbjct: 1 NKLIPDSIGKDIEKACQSIY 20
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 39.5 bits (88), Expect = 0.069
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 222 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 398
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 578
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 579 LREVVNKLIPDSIAKDIEK 635
+ + D I I++
Sbjct: 178 IDFIYKICCSDVIGNSIKR 196
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 36.7 bits (81), Expect = 0.49
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -3
Query: 181 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQ 23
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H +
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 36.3 bits (80), Expect = 0.64
Identities = 37/150 (24%), Positives = 62/150 (41%)
Frame = +3
Query: 204 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 383
S + RV EV +++L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 384 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 563
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 564 VTNSELREVVNKLIPDSIAKDIEKACHGIY 653
+ E V LI D I D+ A IY
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIY 179
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -3
Query: 412 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 233
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 232 SKTLPFNPSEAIFVXLG-TVDKRGADLPLAE-HRRSLDIVPIF 110
++ + E + G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 415 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 251
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -3
Query: 463 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 290
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 289 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVXLG 182
L + + SV + S R S L F P EA+++ +G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +3
Query: 312 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 491
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 492 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 629
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 566 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 459
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 346 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 471
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 489 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 635
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,808,396
Number of Sequences: 1657284
Number of extensions: 13588364
Number of successful extensions: 38043
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 36787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38021
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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