Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L21
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   7.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 109 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 14
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 109 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 14
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 109 ASEWVDNLLLNTFFTALRQAFIFPDRHVQNNK 14
           A  W D +LLN    A+    + P+ H++N K
Sbjct: 339 ADWWKDIMLLNEKTLAVPAPPVLPENHLKNAK 370


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 100 WVDNLLLNTFFTALRQAFIF 41
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -3

Query: 100 WVDNLLLNTFFTALRQAFIF 41
           +++++ LNT++  LRQAF F
Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 292 LNLRKDLSASVSACRSARE 236
           LNLR D+S+S S+  S+ E
Sbjct: 365 LNLRTDISSSSSSISSSEE 383


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 127 QGSVYVQQEASRHH 168
           Q S+Y+QQ+  +HH
Sbjct: 94  QHSLYLQQQQQQHH 107


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 637 AFSMSLAMES-GINLFTTSLSSELVTSRVM 551
           A S+S   E  G +L  T+LSS LV SRV+
Sbjct: 599 ASSVSAGEEGLGNSLAITALSSILVLSRVI 628


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,442
Number of Sequences: 438
Number of extensions: 3697
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)