Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_L19
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 190 2e-48
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 190 2e-48
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 190 2e-48
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 190 2e-48
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 89 6e-18
BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sortin... 29 7.1
BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sortin... 29 7.1
BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sortin... 29 7.1
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 29 9.3
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 29 9.3
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 190 bits (463), Expect = 2e-48
Identities = 91/118 (77%), Positives = 103/118 (87%), Gaps = 6/118 (5%)
Frame = +2
Query: 26 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 187
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 188 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 120 VQIGDIVTVGECRPLSKTVRFNVLKV 145
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 89.4 bits (212), Expect = 6e-18
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +2
Query: 233 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 361
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 43
Score = 54.8 bits (126), Expect = 2e-07
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = +3
Query: 366 VEIGDIVTIGECRPLSKTVRFNVLKV 443
V+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 45 VQIGDIVTVGECRPLSKTVRFNVLKV 70
>BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 8 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 115
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 8 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 115
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 8 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 115
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 409 KGLHSPIVTISPISTXPEARRQ 344
KG+H P + I+P+ST P R+
Sbjct: 126 KGIHGPFLVIAPLSTIPNWERE 147
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 29.1 bits (62), Expect = 9.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 409 KGLHSPIVTISPISTXPEARRQ 344
KG+H P + I+P+ST P R+
Sbjct: 251 KGIHGPFLVIAPLSTIPNWERE 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,837,397
Number of Sequences: 237096
Number of extensions: 1485302
Number of successful extensions: 6837
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6828
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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