Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_L18
(485 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 46 1e-05
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 42 2e-04
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 41 4e-04
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 41 5e-04
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 40 9e-04
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 40 0.001
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 38 0.004
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 38 0.005
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 36 0.014
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 36 0.014
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 36 0.014
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 36 0.019
At3g54470.1 68416.m06026 uridine 5'-monophosphate synthase / UMP... 35 0.033
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 34 0.044
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 34 0.044
At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/PO... 31 0.41
At3g29740.1 68416.m03755 hypothetical protein 30 0.72
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 30 0.95
At3g61600.2 68416.m06901 BTB/POZ domain-containing protein conta... 30 0.95
At3g61600.1 68416.m06900 BTB/POZ domain-containing protein conta... 30 0.95
At3g47320.1 68416.m05143 hypothetical protein several hypothetic... 28 2.9
At3g04710.1 68416.m00505 ankyrin repeat family protein contains ... 28 3.8
At2g46260.1 68415.m05752 BTB/POZ domain-containing protein conta... 28 3.8
At3g27580.1 68416.m03446 protein kinase, putative similar to ser... 27 5.1
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 5.1
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 5.1
At2g05000.1 68415.m00521 hypothetical protein and genefinder 27 5.1
At5g33280.1 68418.m03944 chloride channel-like (CLC) protein, pu... 27 6.7
At5g20370.1 68418.m02423 serine-rich protein-related contains so... 27 6.7
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 27 6.7
At3g50710.1 68416.m05548 F-box family protein contains F-box dom... 27 6.7
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 27 6.7
At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 compone... 27 8.9
At5g54280.1 68418.m06761 myosin heavy chain, putative similar to... 27 8.9
At5g53700.1 68418.m06672 hypothetical protein 27 8.9
At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase... 27 8.9
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 46.0 bits (104), Expect = 1e-05
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVL--SQQYDKHPIIIL 356
S L F LLE G D T +G+T AHK+VL+A S F + L + + II+
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIII 245
Query: 357 KDXKYAELRAMMDYMYRGEVNXSQDQLAALLKAXESL 467
+D + + ++ ++Y E+ QD + LK +L
Sbjct: 246 EDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTL 282
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYD-KHPIIILK 359
S L S F LL+ D T G+ AHK+VL+A SP+F+S +++ + + +
Sbjct: 182 SELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTIN 241
Query: 360 DXKYAELRAMMDYMYR 407
D + +A++ +MY+
Sbjct: 242 DLEPKVFKALLQFMYK 257
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 41.1 bits (92), Expect = 4e-04
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 234 DCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHPI--IILKDXKYAELRAMMDYMYR 407
D T EG+T AH++ L A S F ++ Y + I + + K+ MM ++Y
Sbjct: 542 DVTFLVEGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYT 601
Query: 408 GEVNXSQDQLAALLKAXESLQIRGL 482
G V+ + + LL+A + + GL
Sbjct: 602 GSVDITNEISKDLLRAADQYLLEGL 626
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 40.7 bits (91), Expect = 5e-04
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = +3
Query: 171 NNHQSTLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHPI- 347
N Q T V+ +L + ++ D T+ A ++ AH+ VL+A SP F S+ + +
Sbjct: 144 NQSQVTAVTSLGRMLTESIYTDITINASDGSIGAHRAVLAARSPVFRSMFLHDLKEKELS 203
Query: 348 -IILKDXKYAELRAMMDYMYRGEVNXSQDQL---AALLKAXESLQIRGL 482
I + D +A + Y+Y G + ++D L ALL+A E I L
Sbjct: 204 EINVLDMPLDACQAFLSYIY-GNIQ-NEDFLIHRLALLQAAEKYDIADL 250
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 39.9 bits (89), Expect = 9e-04
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +3
Query: 192 VSVFDTLLEKGMH----VDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQY-DKHPIIIL 356
+ V DTL E G D +G+ ++AH+V+LSA SP+F+ ++ D+ +
Sbjct: 156 LDVSDTLSEFGSSNYFPPDVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFS 215
Query: 357 KD-XKYAELRAMMDYMYRGEVNXSQDQLAALLK 452
K+ Y L +++ + Y + S D + L++
Sbjct: 216 KEKLSYPALCSLIHFFYSDRLEISVDDMEDLVR 248
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFES-VLSQQYDKHPIIILK 359
S + S F LLE D T G+ +AH++VL+A SP FES L ++ I +
Sbjct: 200 SDIGSHFGMLLENEDGSDITFNVSGEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVT 259
Query: 360 DXKYAELRAMMDYMYR 407
D + +A++ Y+Y+
Sbjct: 260 DMEPKVFKALLHYIYK 275
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 264 LKAHKVVLSACSPYFESVLSQQYDK--HPIIILKDXKYAELRAMMDYMYRGEVNXSQDQL 437
+ AHK VL + SP F+++L + ++ I + D Y LR + Y+Y E +
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 438 AALLKAXESLQIRGL 482
LL E Q++ L
Sbjct: 140 CDLLVMSEKYQVKHL 154
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVL 320
S L F LLE G D T +G+T AHK+VL+A S F + L
Sbjct: 186 SGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQL 231
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVL 320
S L LLE G D +G+T AHK+VL+ SP F + L
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQL 232
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 LAAEGQTLKAHKVVLSACSPYFESVLSQ-QYDKHP-IIILKDXKYAELRAMMDYMYRGEV 416
L+ T ++HKV+LS S F + + + H I L D +AMM++MY GE+
Sbjct: 357 LSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGEL 416
Query: 417 N 419
N
Sbjct: 417 N 417
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 243 LAAEGQTLKAHKVVLSACSPYFESVLSQ-QYDKHP-IIILKDXKYAELRAMMDYMYRGEV 416
L+ T ++HKV+LS S F + + + H I L D +AMM++MY GE+
Sbjct: 357 LSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGEL 416
Query: 417 N 419
N
Sbjct: 417 N 417
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 35.5 bits (78), Expect = 0.019
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +3
Query: 177 HQSTLVSVFDTLLEKGMHVDCTLAA-----EGQTLKAHKVVLSACSPYFESVLSQQYDKH 341
++ V F +L++ VD L A EG + AHK+VLSA S F+ +L K
Sbjct: 6 NKELFVGGFAKILKEQRQVDVRLKAGDSGDEGASTSAHKLVLSARSEVFKKMLESDEIKA 65
Query: 342 ----PIIILKDXKYAELRAMMDYMY 404
I L + K+ EL A ++++Y
Sbjct: 66 SAQLETITLCEMKHEELEAFIEFIY 90
>At3g54470.1 68416.m06026 uridine 5'-monophosphate synthase / UMP
synthase (PYRE-F) (UMPS) identical to SP|Q42586 Uridine
5'-monophosphate synthase (UMP synthase) [Includes:
Orotate phosphoribosyltransferase (EC 2.4.2.10)
(OPRtase); Orotidine 5'- phosphate decarboxylase (EC
4.1.1.23) (OMPdecase)] {Arabidopsis thaliana}
Length = 476
Score = 34.7 bits (76), Expect = 0.033
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 264 LKAHKVVLSACSPYFESVLSQQYDKHPIIILKDXKYAELRAMMDYMYRGEV 416
LK H +L +P F S L DKH +I +D K+A++ + Y G +
Sbjct: 271 LKTHVDILPDFTPDFGSKLRAIADKHKFLIFEDRKFADIGNTVTMQYEGGI 321
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 34.3 bits (75), Expect = 0.044
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 210 LLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHPI--IILKDXKYAELR 383
LL+ + D +T KAHK++L+A SP F + + + I++ D + + +
Sbjct: 187 LLDSEVGCDIAFQVGDETYKAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFK 246
Query: 384 AMMDYMY 404
AM+ ++Y
Sbjct: 247 AMLSFIY 253
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 34.3 bits (75), Expect = 0.044
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 TLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQY--DKHPIIILK 359
T + +LE+ + D + TL AHK +LSA S F+S+ + I +
Sbjct: 146 TTLKCLSRMLEESILTDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLMEKESSTIHID 205
Query: 360 DXKYAELRAMMDYMY 404
D A++ Y+Y
Sbjct: 206 DMSRESCMALLSYLY 220
>At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to p300/CBP acetyltransferase-related protein
(GI:12597461) [Arabidopsis thaliana]; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 31.1 bits (67), Expect = 0.41
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 192 VSVFDTLLEKGMHVDCTLAAEGQT-LKAHKVVLSACSPYFESVLSQQYDKHPIIILK 359
+ +D L ++G D + + ++ AH VL+A SP ++L+Q DK+ LK
Sbjct: 41 LETWDKLFKEGSGADTYVETDNKSHFPAHSSVLAAASPVIATLLNQSRDKNGNTYLK 97
>At3g29740.1 68416.m03755 hypothetical protein
Length = 87
Score = 30.3 bits (65), Expect = 0.72
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Frame = +3
Query: 210 LLEKGMHVDCTLAA-----EGQTLKAHKVVLSACSPYFESVLSQQYDKH----PIIILKD 362
+L++ VD L A +G ++ AHK+VLSA S F+ +L + K I L +
Sbjct: 17 ILKEQRQVDVRLKAGDSDQKGVSISAHKLVLSARSEVFKMILETEEIKATTTLDTITLSE 76
Query: 363 XKYAELRAMMD 395
K+ EL A+++
Sbjct: 77 LKHTELVALVE 87
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.9 bits (64), Expect = 0.95
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 264 LKAHKVVLSACSPYFESVL-SQQY---DKHPIIILKDXKYAELRAMMDYMY 404
+ AHK +LSA S FE + S +Y K I L + K+ L A +D+ Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
>At3g61600.2 68416.m06901 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
containing-protein AtPOB1 (GI:12006855) [Arabidopsis
thaliana]; similar to actinfilin (GI:21667852) [Rattus
norvegicus]
Length = 561
Score = 29.9 bits (64), Expect = 0.95
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 204 DTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLS----QQYDKHPIIILKDXKY 371
+T E +DC+ + L +L+A SP+F + S + +H + + +
Sbjct: 136 ETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEE 195
Query: 372 AELRAMMDYMYRGEVN-XSQDQLAALLKAXESLQI 473
A L ++++MY V+ + L +L A + ++
Sbjct: 196 AALMELLNFMYSNAVSVTTAPALLDVLMAADKFEV 230
>At3g61600.1 68416.m06900 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
containing-protein AtPOB1 (GI:12006855) [Arabidopsis
thaliana]; similar to actinfilin (GI:21667852) [Rattus
norvegicus]
Length = 561
Score = 29.9 bits (64), Expect = 0.95
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 204 DTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLS----QQYDKHPIIILKDXKY 371
+T E +DC+ + L +L+A SP+F + S + +H + + +
Sbjct: 136 ETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEE 195
Query: 372 AELRAMMDYMYRGEVN-XSQDQLAALLKAXESLQI 473
A L ++++MY V+ + L +L A + ++
Sbjct: 196 AALMELLNFMYSNAVSVTTAPALLDVLMAADKFEV 230
>At3g47320.1 68416.m05143 hypothetical protein several hypothetical
proteins - Arabidopsis thaliana
Length = 142
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 216 PKACRTLKPASTDGCSTAGRTVDRHPLCPLAAHRAHRGPNH 94
P+ C KP + C T R DR CP+ + NH
Sbjct: 29 PEKCFCGKPVKLEVCKTGYRQGDRVYKCPMLKAEEYESRNH 69
>At3g04710.1 68416.m00505 ankyrin repeat family protein contains
Pfam profile: PF00023 ankyrin repeat
Length = 456
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 246 LGCSPHACPSPKACRTLKPASTDGCSTAG 160
LG + HA KACR L P GC G
Sbjct: 375 LGQAEHALSDAKACRELNPDWPKGCFREG 403
>At2g46260.1 68415.m05752 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
containing-protein AtPOB1 (GI:12006855) [Arabidopsis
thaliana]; similar to actinfilin (GI:21667852) [Rattus
norvegicus]
Length = 561
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 204 DTLLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLS----QQYDKHPIIILKDXKY 371
D E +DC+ + L +L+A SP+F + S + +H + + +
Sbjct: 134 DASSEPNWGIDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRISAQEE 193
Query: 372 AELRAMMDYMYRGEVN-XSQDQLAALLKAXESLQI 473
L ++++MY ++ + L +L A + ++
Sbjct: 194 GALMELLNFMYSNSLSVTTAPALLDVLMAADKFEV 228
>At3g27580.1 68416.m03446 protein kinase, putative similar to
serine/threonine protein kinase [Arabidopsis thaliana]
gi|217861|dbj|BAA01715
Length = 578
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 146 RSTVLPAVEQP--SVDAGFSVRHAFGEGH 226
R T P + QP +D SVRH F +GH
Sbjct: 525 RCTSPPQIPQPVKPMDQAHSVRHGFSQGH 553
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKV---VLSACSPYFESVLSQQYDKHPIII 353
+ L SVF EKG++ DC + EG + + + P+ V Q + PI +
Sbjct: 60 NNLASVFSRRGEKGVNQDCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISL 119
Query: 354 LKDXK 368
L + K
Sbjct: 120 LCNWK 124
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 183 STLVSVFDTLLEKGMHVDCTLAAEGQTLKAHKV---VLSACSPYFESVLSQQYDKHPIII 353
+ L SVF EKG++ DC + EG + + + P+ V Q + PI +
Sbjct: 60 NNLASVFSRRGEKGVNQDCAIVWEGYGCQEDMIFCGIFDGHGPWGHFVSKQVRNSMPISL 119
Query: 354 LKDXK 368
L + K
Sbjct: 120 LCNWK 124
>At2g05000.1 68415.m00521 hypothetical protein and genefinder
Length = 165
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = -3
Query: 216 PKACRTLKPASTDGCSTAGRTVDRHPLCPLAAHRAHRGPNH 94
P C KP + C T R DR CP+ + NH
Sbjct: 29 PVKCFCGKPVKLEVCKTGYRQDDRVYKCPMLKDEEYESRNH 69
>At5g33280.1 68418.m03944 chloride channel-like (CLC) protein,
putative similar to CLC-c, At5g49890 [Arabidopsis
thaliana] and chloride channel protein ClC-1 - Nicotiana
tabacum, PIR:T02939
Length = 763
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 155 VLPAVEQPSVDAGFSVRHAFGEGHACGLHPSSRRT 259
V+P G RH F H GLHPS R+
Sbjct: 716 VIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRS 750
>At5g20370.1 68418.m02423 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 175
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 323 STIRQASNHNIKRXKICGATSHDG 394
S + +SNH KR +C T+H G
Sbjct: 57 SVVTVSSNHQTKRKCLCSPTTHPG 80
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 234 DCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHP 344
D T + EG+ + AH+ +L+A S +F + P
Sbjct: 28 DVTFSVEGRLVHAHRCILAARSLFFRKFFCESDPSQP 64
>At3g50710.1 68416.m05548 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 219 KGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYD 335
K +H+ C E +T K+H+ +LS C E VL + Y+
Sbjct: 157 KSLHLVCV---EYKTKKSHRRLLSGCPVLEELVLDKSYN 192
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 66 TSKSDLIPCSDLGRDGRGERQE--GIMDDDQQFCLRWNNHQST 188
T K ++ D +G E+QE G +++++ C+ + +H ST
Sbjct: 543 TEKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKICVEYKDHHST 585
>At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 component,
putative / oxoglutarate decarboxylase, putative /
alpha-ketoglutaric dehydrogenase, putative similar to
SP|P20967 2-oxoglutarate dehydrogenase E1 component,
mitochondrial precursor (EC 1.2.4.2)
(Alpha-ketoglutarate dehydrogenase) {Saccharomyces
cerevisiae}; contains Pfam profiles PF02779:
Transketolase, pyridine binding domain, PF00676:
Dehydrogenase E1 component
Length = 1025
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 94 VIWAAMGAVSGKRA*WMTINSSACGGTTISRRWFQCSTR 210
++W +G+ K A T++ S CG R C TR
Sbjct: 1 MVWFRIGSSVAKLAIRRTLSQSRCGSYATRTRVLPCQTR 39
>At5g54280.1 68418.m06761 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499045|emb|CAA84065
Length = 1030
Score = 26.6 bits (56), Expect = 8.9
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 66 TSKSDL---IPCSDLGRDGRGERQEGIMDDDQQFCLRWNNHQSTLVSVFDTLLEKGMHVD 236
TS SDL I S+ + E + + +QF RW+ + + S+ +T ++ +
Sbjct: 812 TSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQ 871
Query: 237 CTLAAEGQTLKAHKVVLSACSPYFESVLSQQYD 335
+LAA ++L A + A S+ YD
Sbjct: 872 MSLAAARKSLAAESITGQAGGRQDTSISPFGYD 904
>At5g53700.1 68418.m06672 hypothetical protein
Length = 248
Score = 26.6 bits (56), Expect = 8.9
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 210 LLEKGMHVDCTLAAEGQTLKAHKVVLSACSPYFESVLSQQYDKHPIIILKDXKYAEL--R 383
++ KG VD L G+T K+V+ P L HP I ++ K AEL +
Sbjct: 173 IMGKGC-VDKALELSGRTADGWKIVVYFVVPPAGRKLKPTGSGHPTIGVERMKKAELKKK 231
Query: 384 AMMDYMYRGE 413
A M+ M +G+
Sbjct: 232 AKMEMMDKGK 241
>At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase GB:BAA88472
GI:6624205 from (Cucumis sativus); contains Pfam profile
PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 459
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 108 DGRGERQEGIMDDDQQFCLRWNNHQSTLVSVF 203
D G +G+ DD Q F W+ ST SVF
Sbjct: 69 DTFGAAGDGVSDDTQAFVSAWSKACSTSKSVF 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,275,473
Number of Sequences: 28952
Number of extensions: 173635
Number of successful extensions: 543
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 838967680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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