Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L13
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006112-1|AAH06112.1|  497|Homo sapiens ADP-dependent glucokina...    56   1e-07
AK075560-1|BAC11699.1|  496|Homo sapiens protein ( Homo sapiens ...    56   1e-07
AF204270-1|AAL31473.1|  347|Homo sapiens RbBP-35 protein.              40   0.006

>BC006112-1|AAH06112.1|  497|Homo sapiens ADP-dependent glucokinase
           protein.
          Length = 497

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = +2

Query: 341 RVALGYGACHDLFVNATLLLDHRELI-GVPEHFDEITTKEEFLKSFTYFFKHGAAAERFM 517
           RVA+G  AC D+ ++   LL    L  G  +    + ++ +  ++F +F   GAAAERF 
Sbjct: 74  RVAVGVNACVDVVLSGVKLLQALGLSPGNGKDHSILHSRNDLEEAFIHFMGKGAAAERFF 133

Query: 518 SNSKLYDDYIKRALXIPGTKWNIGGNAPLMAXRF 619
           S+ + + D  + A   PG +  +GGNA L+  +F
Sbjct: 134 SDKETFHDIAQVASEFPGAQHYVGGNAALIGQKF 167


>AK075560-1|BAC11699.1|  496|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0260 fis, clone NT2RP3004059. ).
          Length = 496

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = +2

Query: 341 RVALGYGACHDLFVNATLLLDHRELI-GVPEHFDEITTKEEFLKSFTYFFKHGAAAERFM 517
           RVA+G  AC D+ ++   LL    L  G  +    + ++ +  ++F +F   GAAAERF 
Sbjct: 74  RVAVGVNACVDVVLSGVKLLQALGLSPGNGKDHSILHSRNDLEEAFIHFMGKGAAAERFF 133

Query: 518 SNSKLYDDYIKRALXIPGTKWNIGGNAPLMAXRF 619
           S+ + + D  + A   PG +  +GGNA L+  +F
Sbjct: 134 SDKETFHDIAQVASEFPGAQHYVGGNAALIGQKF 167


>AF204270-1|AAL31473.1|  347|Homo sapiens RbBP-35 protein.
          Length = 347

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +2

Query: 494 GAAAERFMSNSKLYDDYIKRALXIPGTKWNIGGNAPLMAXRF 619
           GAAAERF S+ + + D  + A   PG +  +GGNA L+  +F
Sbjct: 4   GAAAERFFSDKETFHDIAQVASEFPGAQHYVGGNAALIGQKF 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,471,423
Number of Sequences: 237096
Number of extensions: 1834599
Number of successful extensions: 3082
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3080
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)