Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L13
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040642-3|AAN73872.2|  502|Caenorhabditis elegans Hypothetical ...    50   1e-06
U13875-13|AAA21156.2|  470|Caenorhabditis elegans Hypothetical p...    31   0.94 
Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    27   8.8  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    27   8.8  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    27   8.8  
AC024771-3|AAK70660.1|  148|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AF040642-3|AAN73872.2|  502|Caenorhabditis elegans Hypothetical
           protein C50D2.7 protein.
          Length = 502

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +2

Query: 287 IYCPWKMRIESKQGNMQPRVALGYGACHDLFVNATLLLDH-RELIGVPEHFDEITTKEEF 463
           ++  W+  I  K G M  +  +G+    DL V+   ++D         +  + + T  + 
Sbjct: 49  MFLSWERAIV-KPGAMFKKAVIGFNCNVDLIVSGVRVVDALNTTCSEGKDQETLETLADL 107

Query: 464 LKSFTYFFKHGAAAERFMSNSKLYDDYIKRALXIPGTKWNIGGNAPLMAXR 616
            ++F +FF+ GAAAER+MS+   ++  +  +     +  +IGGNA LMA R
Sbjct: 108 HQTFAHFFQRGAAAERYMSSEDQFNLLVAESEASTRSHHHIGGNAALMADR 158


>U13875-13|AAA21156.2|  470|Caenorhabditis elegans Hypothetical
           protein C26E6.2 protein.
          Length = 470

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/55 (21%), Positives = 31/55 (56%)
 Frame = +3

Query: 441 KSQLKRSFSKVLHISSSMALQPRGSCQIPSFMMTTSREPXTFQERNGILVVMHLS 605
           +S ++R  S+  H+S ++ + P+     P  + TT++    FQ+ N ++++  ++
Sbjct: 235 RSYMQRKLSRASHVSQALPIAPQQIKAEPMEVDTTNQTIQNFQQNNNLMLLASIN 289


>Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical
           protein K08F8.4 protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/49 (24%), Positives = 27/49 (55%)
 Frame = +2

Query: 329 NMQPRVALGYGACHDLFVNATLLLDHRELIGVPEHFDEITTKEEFLKSF 475
           +++ R +  +  C+++ V      DHR++ GV EHF +   K+  ++ +
Sbjct: 59  HIESRPSKTHEGCYEVLVEFAEAEDHRKIEGVIEHFQQKAEKKVLVQDW 107


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 350 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 493
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 350 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 493
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 350 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 493
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


>AC024771-3|AAK70660.1|  148|Caenorhabditis elegans Hypothetical
           protein Y40B10A.5 protein.
          Length = 148

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 145 NVIYILVFTMAGFPVKLGTILSFILVFYAIYYRKTDI 255
           N  +IL+  MAG  +    I  FI VF+   Y K  I
Sbjct: 77  NQFFILIVVMAGITLVFTAIDRFICVFFPFRYLKLHI 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,604,889
Number of Sequences: 27780
Number of extensions: 293202
Number of successful extensions: 744
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)