Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L13
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g51850.1 68416.m05686 calcium-dependent protein kinase, putat...    30   1.2  
At3g29635.1 68416.m03729 transferase family protein similar to a...    30   1.5  
At3g13130.1 68416.m01643 hypothetical protein                          29   2.7  
At1g15670.1 68414.m01881 kelch repeat-containing F-box family pr...    28   6.2  
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f...    27   8.2  

>At3g51850.1 68416.m05686 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655;
           contains protein kinase domain, Pfam:PF00069; contains
           EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 528

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 398 LDHRELIGVPEHFDEITTKEEFLKSFTYFFKHG 496
           LD+ E + V  H  ++   E   K+F+YF K G
Sbjct: 411 LDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDG 443


>At3g29635.1 68416.m03729 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 458

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 305 MRIESKQGNMQPRVALGYGACHDLFVNATLLLDHRELIGVPEHFDEITTKE--EFLKSFT 478
           +R ES+  ++ P ++L   +   L +  TL  +    IG+  H   +  K    F+KS+ 
Sbjct: 123 IRPESEIRSLVPELSLSCDSPSVLSLQVTLFPNQGFCIGIASHHSVMDGKTVVRFIKSWA 182

Query: 479 YFFKHGA 499
           +  KHGA
Sbjct: 183 HICKHGA 189


>At3g13130.1 68416.m01643 hypothetical protein
          Length = 201

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = -2

Query: 486 KKYVKLLRNSSLVVISSKCSG-----TPINSRWSNNNVAF 382
           K Y+ LL N  LVV+ +KCSG      PI   WSN +  F
Sbjct: 47  KNYMFLLCNG-LVVVVAKCSGLVASSKPIEKIWSNTDKTF 85


>At1g15670.1 68414.m01881 kelch repeat-containing F-box family
           protein similar to SP|Q9ER30 Kelch-related protein 1
           (Sarcosin) {Rattus norvegicus}; contains Pfam profiles
           PF01344: Kelch motif, PF00646: F-box domain
          Length = 359

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 492 CLKKYVKLLRNSSLVVISSKCSGTP-INSRWSNNNVAFTKRSWH 364
           C   YV + R+ +LVVI S   G P +   W  +N  + K   H
Sbjct: 301 CNVSYVAIRRSGNLVVIGSARYGEPSVGYNWDMSNSRWLKLETH 344


>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
           factor family protein similar to to PRESSED FLOWER
           (GP:17907768) {Arabidopsis thaliana};
          Length = 268

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +3

Query: 336 NRALLWATVHAMTSL*MQRYC*TIVN*LEYQSISTKSQLKRSFSKVLHISSSMALQPRGS 515
           +R LL AT  A TS+  + +       + +Q   + +++   F    ++S++  L    S
Sbjct: 81  HRQLLAATTAAATSIGAEDHQHMTAMSM-HQYPCSNNEIDLGFGSCSNLSANYFLNGSSS 139

Query: 516 CQIPSFMMTTSREPXTFQERNGI 584
            QIPSF +  S      +  NG+
Sbjct: 140 SQIPSFFLGLSSSSGGCENNNGM 162


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,628,067
Number of Sequences: 28952
Number of extensions: 266137
Number of successful extensions: 659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)