Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_L11
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   167   1e-41
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   167   1e-41
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   167   1e-41
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   167   1e-41
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   167   1e-41
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   167   1e-41
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.7  
AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p pro...    28   9.1  
AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA...    28   9.1  

>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 521
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score =  138 bits (335), Expect = 4e-33
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 563
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 564 VTFEFPEPYL 593
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 521
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score =  138 bits (335), Expect = 4e-33
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 563
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 564 VTFEFPEPYL 593
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score =  138 bits (335), Expect = 4e-33
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 563
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 564 VTFEFPEPYL 593
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  167 bits (406), Expect = 1e-41
 Identities = 81/120 (67%), Positives = 99/120 (82%)
 Frame = +2

Query: 23  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 202
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 203 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 382
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122



 Score =  138 bits (335), Expect = 4e-33
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +3

Query: 384 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGRE 563
           VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 564 VTFEFPEPYL 593
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 176 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 355
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 356 RPRSRT 373
           +P ++T
Sbjct: 625 QPVAQT 630


>AY058244-1|AAL13473.1|  796|Drosophila melanogaster GH01087p
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 17  VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 190
           VK++ + ++ +G+  D F   ++      ETNS ++ QLR  Y  K +      KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371


>AE014297-1919|AAF55113.1|  796|Drosophila melanogaster CG7262-PA
           protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 17  VKMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 190
           VK++ + ++ +G+  D F   ++      ETNS ++ QLR  Y  K +      KK++
Sbjct: 315 VKVAVEFLREAGSSHDEFAQLVADRNAG-ETNSKIENQLRLQYANKIRNSTDAYKKAV 371


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,068,610
Number of Sequences: 53049
Number of extensions: 569291
Number of successful extensions: 1493
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)