Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K24
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 212 1e-54
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 212 1e-54
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 212 1e-54
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 212 1e-54
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 212 1e-54
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 212 1e-54
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 6e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 1.5
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 8.2
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 8.2
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 8.2
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 8.2
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 113 FPE 105
FPE
Sbjct: 189 FPE 191
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 74
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 67 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 126
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 127 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 186
Query: 113 FPE 105
FPE
Sbjct: 187 FPE 189
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 19 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 72
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 113 FPE 105
FPE
Sbjct: 189 FPE 191
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 74
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 113 FPE 105
FPE
Sbjct: 189 FPE 191
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 74
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 113 FPE 105
FPE
Sbjct: 189 FPE 191
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 74
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 212 bits (517), Expect = 1e-54
Identities = 98/123 (79%), Positives = 112/123 (91%)
Frame = -2
Query: 473 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 294
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 293 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 114
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 113 FPE 105
FPE
Sbjct: 189 FPE 191
Score = 60.5 bits (140), Expect = 5e-09
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -1
Query: 615 TSISQXXVELETNSDLKAQLRELYITKAKEIEL-HNKKSIIIYVPMPKXEGLSE 457
+ ISQ +ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+ + +
Sbjct: 21 SGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQK 74
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 6e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = -2
Query: 323 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 168
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 151 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 285
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 227 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 144
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 227 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 144
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 227 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 144
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 227 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 144
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,365,132
Number of Sequences: 237096
Number of extensions: 1684049
Number of successful extensions: 2971
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2965
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -