Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K23
(511 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 84 2e-15
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 82 6e-15
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 79 8e-14
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 77 2e-13
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 74 2e-12
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 62 5e-09
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 52 6e-06
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 50 4e-05
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 49 5e-05
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 40 0.033
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 37 0.31
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 2.2
UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 33 5.0
UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;... 32 6.6
UniRef50_Q6VB59 Cluster: ORF_03R; n=1; Herpes simplex virus 1 st... 32 6.6
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 81.0 bits (191), Expect = 1e-14
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 122
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 123 IVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 82.2 bits (194), Expect = 6e-15
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Frame = +1
Query: 58 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 237
T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH
Sbjct: 54 TQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFH 113
Query: 238 FXKEQEFLSSFELR*ALDISL*TDEAEVCICSRWQGPRHQYCQSWILQVARQRQTPQTTC 417
K Q + + L + T++ E C + Q P I ++ + Q P
Sbjct: 114 KLKNQTVCPTINID-KLWTLVGTEKREECAKNTSQAPVIDLTDHGIFKLLGKGQLPNQPV 172
Query: 418 HSKSKVLLKISREE-NQGCGWCLCT 489
K + + K++ ++ + G C+ T
Sbjct: 173 VVKCRYISKLAEKKIKEVGGACILT 197
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +2
Query: 245 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 424
KN+ CP +N+DKLWTLV + R + A + PVI++ P QPV+V
Sbjct: 116 KNQTVCPTINIDKLWTLVGTEKREECAKNTS-QAPVIDLTDHGIFKLLGKGQLPNQPVVV 174
Query: 425 XXXXXXXXXXXXXXDVGGACVLSA 496
+VGGAC+L+A
Sbjct: 175 KCRYISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 78.6 bits (185), Expect = 8e-14
Identities = 37/69 (53%), Positives = 41/69 (59%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
MAT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 232 FHFXKEQEF 258
FH + + F
Sbjct: 61 FHKLRNKFF 69
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 245 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPK-QPVI 421
+NK FCP++NLDKLW+LV E + K S+ D VP+I++ + P+ +P +
Sbjct: 65 RNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPENKPFV 121
Query: 422 VXXXXXXXXXXXXXXDVGGACVLSA 496
V + GGA VL+A
Sbjct: 122 VKAKLISKTAEKKIKEAGGAVVLTA 146
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = +2
Query: 245 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 424
KN +CP +NLDKLW+LVSE+TR YA D K PVI++VKA PKQPVIV
Sbjct: 51 KNGLYCPTVNLDKLWSLVSEKTRTTYAEKKD-KAPVIDVVKAGYFKVLGKGLLPKQPVIV 109
Query: 425 XXXXXXXXXXXXXXDVGGACVLSA 496
VGGAC+L A
Sbjct: 110 KAKFFSRTAEQKIKGVGGACILVA 133
Score = 70.9 bits (166), Expect = 2e-11
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 246
NAGG+HHHRIN DKYHPGYFGK+GMRNFH K
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRK 51
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 73.7 bits (173), Expect = 2e-12
Identities = 39/86 (45%), Positives = 47/86 (54%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L KN CPV+N+DKLW+LVS+ TR KYA KVPVI++ KA P QPV
Sbjct: 65 LKKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLPNQPV 123
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
+V VGGACVL+A
Sbjct: 124 VVKAKYFSKTAERRIVAVGGACVLTA 149
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/67 (52%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXX--XXXXNAGGEHHHRINMDKYHPGYFGKLGM 225
M + KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGM
Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGM 60
Query: 226 RNFHFXK 246
R FH K
Sbjct: 61 RTFHLKK 67
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR
Sbjct: 1 MPTDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRY 60
Query: 232 FHFXKEQEFLSSFEL 276
+ K+ F S L
Sbjct: 61 YRKLKQNNFNKSINL 75
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 52.4 bits (120), Expect = 6e-06
Identities = 25/50 (50%), Positives = 26/50 (52%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 201
M T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 1 MPTHLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
Score = 48.4 bits (110), Expect = 9e-05
Identities = 30/86 (34%), Positives = 39/86 (45%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N +F PV+NLDKLWTLV + R K +A +VPVI+ + A P P
Sbjct: 103 LTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADSTEVPVIDTLAAGYGKVLGKGRLPALPC 161
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV + GG L A
Sbjct: 162 IVKARWVSSLAEKKIKEAGGVVKLVA 187
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/69 (36%), Positives = 32/69 (46%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M KKTRKLRGHVS AGG H + ++HP Y GK GMR
Sbjct: 1 MTDRVKKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRV 60
Query: 232 FHFXKEQEF 258
+H + ++
Sbjct: 61 YHRKENSDY 69
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 49.2 bits (112), Expect = 5e-05
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M T KK+RK+RG S +GG+HHH+I ++Y YF K GMR
Sbjct: 1 MVTKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRI 60
Query: 232 FHFXK--EQEFLSSFE 273
++ K FL F+
Sbjct: 61 YNLEKTLNSTFLLKFK 76
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 39.9 bits (89), Expect = 0.033
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 204
M+ +KTRK +GHVS NAGGEH HRIN PG
Sbjct: 1 MSGRLRKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 36.7 bits (81), Expect = 0.31
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 187 DKYHPGYFGKLGMRNFH 237
DK+HPG FGK+GMR+FH
Sbjct: 28 DKHHPGNFGKVGMRHFH 44
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 2.2
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 486 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 391
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_A5B3P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 181
Score = 32.7 bits (71), Expect = 5.0
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3
Query: 236 WKFLIPSLPKYPGWYLS 186
WK LIP+ PK PGW LS
Sbjct: 20 WKCLIPTFPKLPGWCLS 36
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGM-RNFHFXKEQEFLSSFEL 276
NAG + H +++ K++P YFGK G RN K+ E ++ EL
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGFNRNPCLIKQLETINIGEL 78
>UniRef50_UPI0000F1F127 Cluster: PREDICTED: hypothetical protein;
n=7; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 656
Score = 32.3 bits (70), Expect = 6.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 254 NFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 346
NFCP L D WT++S+ + Y S+PD V
Sbjct: 116 NFCPWLEED--WTMLSDDSTTPYESSPDNSV 144
>UniRef50_Q6VB59 Cluster: ORF_03R; n=1; Herpes simplex virus 1
strain R-15|Rep: ORF_03R - Human herpesvirus 1 (strain
R15) (HHV-1) (Human herpes simplex virus1)
Length = 172
Score = 32.3 bits (70), Expect = 6.6
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 242 LKWKFLIPSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP 102
L+WK P+ P W +S+ L PP PGCLR +PI P P
Sbjct: 32 LRWKPQNPAGPSLCVWRMSLGSL--TGPPRRAPSPGCLRSWPI-PAP 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,261,311
Number of Sequences: 1657284
Number of extensions: 8951362
Number of successful extensions: 22026
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22008
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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