Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K23
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a pr... 84 3e-16
BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a ... 84 3e-16
AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a ... 84 3e-16
AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A ... 84 3e-16
BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for IM... 83 5e-16
BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a ... 81 2e-15
AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a ... 46 1e-04
AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein. 30 4.1
AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens ... 29 9.4
>U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 122
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 123 IVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 122
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 123 IVKAKFFSRRAEEKIKSVGGACVLVA 148
>AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a
protein.
Length = 106
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 59.7 bits (138), Expect = 6e-09
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 370
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A
protein.
Length = 148
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
+H + Q F + L
Sbjct: 61 YHLKRNQSFCPTVNL 75
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 122
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 123 IVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for
IMAGE:3543815) protein.
Length = 147
Score = 83.0 bits (196), Expect = 5e-16
Identities = 36/70 (51%), Positives = 43/70 (61%)
Frame = +1
Query: 67 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 246
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H +
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64
Query: 247 EQEFLSSFEL 276
Q F + L
Sbjct: 65 NQSFCPTVNL 74
Score = 81.0 bits (191), Expect = 2e-15
Identities = 39/86 (45%), Positives = 49/86 (56%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 62 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPV 121
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 122 IVKAKFFSRRAEEKIKSVGGACVLVA 147
>BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 81.0 bits (191), Expect = 2e-15
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = +1
Query: 52 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 231
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 232 FHFXKEQEFLSSFEL 276
++ + Q F + L
Sbjct: 61 YNLKRNQSFCPTVNL 75
Score = 77.8 bits (183), Expect = 2e-14
Identities = 38/86 (44%), Positives = 48/86 (55%)
Frame = +2
Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
L +N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ KQPV
Sbjct: 63 LKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQPV 122
Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
IV VGGACVL A
Sbjct: 123 IVKAKLFSRRAEEKIKSVGGACVLVA 148
>AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a
protein.
Length = 34
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 269 LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 370
+NLDKLWTLVSEQTR+ A G P+I++V++
Sbjct: 1 VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34
>AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein.
Length = 126
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -3
Query: 227 LIPSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 69
L P+LPK+PG ++ L W S P P G + + PCP PL FLV+
Sbjct: 53 LSPALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104
>AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ44237 fis, clone THYMU3007845. ).
Length = 139
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +1
Query: 367 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 495
+W L Q PQ + L R + C WC C C
Sbjct: 71 AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,336,909
Number of Sequences: 237096
Number of extensions: 1469509
Number of successful extensions: 6464
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6457
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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