Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K23
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.      89   3e-18
U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal prot...    89   3e-18
AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p pro...    89   3e-18
AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA...    89   3e-18
X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal prot...    87   1e-17
D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain pro...    29   2.8  
AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,...    28   8.4  
AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,...    28   8.4  

>U66358-1|AAC47472.1|  149|Drosophila melanogaster RpL27a protein.
          Length = 149

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = +1

Query: 64  KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFX 243
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH  
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 244 KEQEFLSSFEL 276
           ++ +F     L
Sbjct: 66  RQHKFRPEINL 76



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 37/86 (43%)
 Frame = +2

Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
           L +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PV
Sbjct: 64  LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123

Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
           IV                GG C+LSA
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCLLSA 149


>U66357-1|AAC47475.1|  149|Drosophila melanogaster ribosomal protein
           RpL27a protein.
          Length = 149

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = +1

Query: 64  KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFX 243
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH  
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 244 KEQEFLSSFEL 276
           ++ +F     L
Sbjct: 66  RQHKFRPEINL 76



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 37/86 (43%)
 Frame = +2

Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
           L +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PV
Sbjct: 64  LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123

Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
           IV                GG C+LSA
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCLLSA 149


>AY071144-1|AAL48766.1|  149|Drosophila melanogaster RE17991p
           protein.
          Length = 149

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = +1

Query: 64  KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFX 243
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH  
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 244 KEQEFLSSFEL 276
           ++ +F     L
Sbjct: 66  RQHKFRPEINL 76



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 37/86 (43%)
 Frame = +2

Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
           L +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PV
Sbjct: 64  LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123

Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
           IV                GG C+LSA
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCLLSA 149


>AE014134-746|AAF51006.3|  149|Drosophila melanogaster CG15442-PA
           protein.
          Length = 149

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 39/71 (54%), Positives = 44/71 (61%)
 Frame = +1

Query: 64  KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFX 243
           +KKTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GMRNFH  
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 244 KEQEFLSSFEL 276
           ++ +F     L
Sbjct: 66  RQHKFRPEINL 76



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 37/86 (43%)
 Frame = +2

Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
           L +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PV
Sbjct: 64  LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123

Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
           IV                GG C+LSA
Sbjct: 124 IVKAKYFSKKAEDKIKKAGGVCLLSA 149


>X74484-1|CAA52601.1|  149|Drosophila melanogaster ribosomal protein
           L27a protein.
          Length = 149

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 38/71 (53%), Positives = 43/71 (60%)
 Frame = +1

Query: 64  KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFX 243
           +KKTRKLRGHVS                 N GG HHHRIN DKYHPGYFGK+GMRNFH  
Sbjct: 6   RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65

Query: 244 KEQEFLSSFEL 276
           ++ +F     L
Sbjct: 66  RQHKFRPEINL 76



 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 28/86 (32%), Positives = 38/86 (44%)
 Frame = +2

Query: 239 LXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPV 418
           L +   F P +NLDKLW+LV  +   +       K PVI++VK            P +PV
Sbjct: 64  LRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPV 123

Query: 419 IVXXXXXXXXXXXXXXDVGGACVLSA 496
           IV              + GG C+LSA
Sbjct: 124 IVKAKYFSKKAEDKIKEAGGVCLLSA 149


>D10228-1|BAA01080.1|  761|Drosophila melanogaster Ets domain
           protein protein.
          Length = 761

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 349 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 450
           RH  C+   + +A  R+TP  TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743


>AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,
           isoform D protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 245 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 367
           K  N CP++ L K W       RL Y     GK+PV  + K
Sbjct: 143 KANNICPMMCLRKHW------MRLSYCVEKSGKIPVKTLAK 177


>AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,
           isoform C protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 245 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 367
           K  N CP++ L K W       RL Y     GK+PV  + K
Sbjct: 143 KANNICPMMCLRKHW------MRLSYCVEKSGKIPVKTLAK 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,775,668
Number of Sequences: 53049
Number of extensions: 445845
Number of successful extensions: 1594
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)