Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K21
         (361 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    93   8e-20
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     92   1e-19
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    92   1e-19
06_02_0196 - 12898050-12898553,12898689-12900824                       27   3.4  
10_01_0345 - 3811057-3811236,3811342-3811615,3811732-3812289,381...    27   4.4  
09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283     27   4.4  
07_01_0426 + 3239274-3239386,3239472-3239702,3242516-3242642,324...    27   4.4  
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903...    27   5.9  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 92.7 bits (220), Expect = 8e-20
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = +3

Query: 84  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 248
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K+
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 92.3 bits (219), Expect = 1e-19
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 84  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 245
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 92.3 bits (219), Expect = 1e-19
 Identities = 38/54 (70%), Positives = 41/54 (75%)
 Frame = +3

Query: 84  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 245
           MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL  CRQCFR  A DIGF K
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54


>06_02_0196 - 12898050-12898553,12898689-12900824
          Length = 879

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 153 RIGMTEILVRICEGENTKYLRGPF*EIKLFLAN--EQQIRYTFK 28
           R+GM   L R+C+      L G   +IK+ L N  E++IRY  K
Sbjct: 101 RMGMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLK 144


>10_01_0345 -
           3811057-3811236,3811342-3811615,3811732-3812289,
           3812602-3812747,3812930-3813097,3813896-3814003,
           3814859-3815029,3816557-3816949,3817522-3817617,
           3817715-3817774,3818600-3818744,3819296-3819520,
           3820106-3820254
          Length = 890

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 110 RIPNICVAHFKKLNCFSLTSNKLDT 36
           R+P I V H K+ +      NKLDT
Sbjct: 759 RLPEILVVHLKRFSYSRFMKNKLDT 783


>09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283
          Length = 205

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 110 RIPNICVAHFKKLNCFSLTSNKLDT 36
           R+P + V H K+ +    T NKL+T
Sbjct: 130 RLPEVLVIHLKRFSYTQFTRNKLET 154


>07_01_0426 +
           3239274-3239386,3239472-3239702,3242516-3242642,
           3242729-3242788,3242868-3242960,3243073-3243369,
           3243450-3243761,3243857-3244114,3244227-3244375,
           3244470-3245102,3245367-3245640,3245736-3245777,
           3246332-3246586,3246700-3246711
          Length = 951

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 110 RIPNICVAHFKKLNCFSLTSNKLDT 36
           R+P + V H K+ +    T NKL+T
Sbjct: 777 RLPEVLVIHLKRFSYTQFTRNKLET 801


>12_02_1151 +
           26488686-26488792,26488897-26489142,26490246-26490381,
           26490502-26490561,26490648-26490740,26491421-26491663,
           26491828-26491968,26492312-26492482,26492813-26492899,
           26492954-26493211,26493300-26493445,26493535-26493922,
           26493935-26494092,26494267-26494540,26494721-26494894
          Length = 893

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 110 RIPNICVAHFKKLNCFSLTSNKLDT 36
           R+P I + H K+ +    T NKL+T
Sbjct: 764 RLPEILIIHLKRFSYSRYTKNKLET 788


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,912,861
Number of Sequences: 37544
Number of extensions: 152231
Number of successful extensions: 307
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)