Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K20
         (435 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    63   1e-10
03_05_0012 + 19702264-19702459,19702478-19702572                       28   2.9  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    27   8.7  
01_06_1007 - 33733500-33733604,33733837-33733917,33734191-337342...    27   8.7  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 62.9 bits (146), Expect = 1e-10
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +3

Query: 144 LPXTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
           +P T EKI+T++KAA + VE YWPGLFAK LE  +V DLI ++GSG
Sbjct: 20  IPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLILSVGSG 65


>03_05_0012 + 19702264-19702459,19702478-19702572
          Length = 96

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +2

Query: 113 YSALILVD--DDVAXNW*ENFHH 175
           Y+A +LVD   D+A NW  N HH
Sbjct: 64  YAACVLVDGASDIAINWSGNMHH 86


>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 98  ELACVYSALILVDDDVAXNW*ENFHHLESGGCRCRAILARSV 223
           EL+        VDDDV  +  EN   + SGG + R  L +S+
Sbjct: 705 ELSAKSKVCHAVDDDVFYSDKENLTPISSGGIKARRCLPKSL 746


>01_06_1007 -
           33733500-33733604,33733837-33733917,33734191-33734238,
           33734364-33734549,33735148-33735678,33735823-33735864,
           33735945-33736065,33736200-33736281,33737169-33737227,
           33738492-33738564,33738694-33738913
          Length = 515

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 217 VCSPKPWKASMSVT*SPTSALEWVLLRPLV 306
           VC  +P         SP  +L WVLLRP++
Sbjct: 482 VCKLRPTALLADGVASPLRSLAWVLLRPIM 511


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,310,855
Number of Sequences: 37544
Number of extensions: 171789
Number of successful extensions: 422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)