Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K20
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 62 6e-10
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 62 6e-10
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 62 6e-10
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 62 6e-10
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 62 6e-10
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 62 6e-10
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 60 2e-09
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSAL+L DD+V
Sbjct: 1 MASVSELACIYSALVLHDDEV 21
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 62.5 bits (145), Expect = 6e-10
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG 66
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELAC+YSALIL DD+V
Sbjct: 1 MASVSELACIYSALILHDDEV 21
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 60.5 bits (140), Expect = 2e-09
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +3
Query: 153 TGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSG 281
T +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI ++G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAG 66
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 83 MVSKAELACVYSALILVDDDV 145
M S +ELA +YSALIL DD+V
Sbjct: 1 MASVSELARIYSALILHDDEV 21
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,997,100
Number of Sequences: 237096
Number of extensions: 887121
Number of successful extensions: 1254
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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