Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K19
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 208 1e-52
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 189 5e-47
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 174 1e-42
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 157 2e-37
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 144 1e-33
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 132 8e-30
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 126 4e-28
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 123 3e-27
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 123 4e-27
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 115 1e-24
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 96 6e-19
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 89 7e-17
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 83 6e-15
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 1e-13
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 78 1e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 78 2e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 1e-10
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 54 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 51 2e-05
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 51 2e-05
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 50 3e-05
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 50 5e-05
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 48 1e-04
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 48 1e-04
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 48 2e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.002
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 44 0.003
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.003
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 43 0.005
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.014
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 41 0.019
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.058
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 37 0.41
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 36 0.54
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 36 0.72
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 2.2
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 2.9
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 6.7
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 32 8.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 208 bits (507), Expect = 1e-52
Identities = 98/134 (73%), Positives = 116/134 (86%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+ ++ I KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 548 ITRDVTNSELXEVV 589
I R++T+++L VV
Sbjct: 175 IKREITSTDLKGVV 188
Score = 72.5 bits (170), Expect = 7e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 225
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 189 bits (460), Expect = 5e-47
Identities = 95/142 (66%), Positives = 112/142 (78%)
Frame = +2
Query: 167 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 346
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 347 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXI 526
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH VR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 527 XKKMCEIITRDVTNSELXEVVN 592
KKM EI+TR+V ++L EVVN
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVN 186
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 225
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 174 bits (424), Expect = 1e-42
Identities = 87/134 (64%), Positives = 104/134 (77%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ + +R I +KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 548 ITRDVTNSELXEVV 589
+T T+ +L E+V
Sbjct: 567 MTNMATSCDLKELV 580
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1
Query: 91 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 192
DPF +KDWYD+KAPS+F R VG TLV+RTQG +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 157 bits (380), Expect = 2e-37
Identities = 77/135 (57%), Positives = 102/135 (75%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ + V+ I KKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 548 ITRDVTNSELXEVVN 592
+T V++++L VV+
Sbjct: 171 LTETVSSNDLKTVVD 185
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +1
Query: 88 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGNENCFGRIEGKSF 225
VDPFTRK+WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 144 bits (349), Expect = 1e-33
Identities = 70/134 (52%), Positives = 94/134 (70%)
Frame = +2
Query: 191 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 370
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 371 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEII 550
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA + +R I +KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 551 TRDVTNSELXEVVN 592
R+ + L ++ N
Sbjct: 173 QREASTCTLQQLTN 186
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +1
Query: 91 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 225
DPF RKDWY +KAP+ F+ R VG TLVNR+ G +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 132 bits (318), Expect = 8e-30
Identities = 67/135 (49%), Positives = 93/135 (68%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ ++ I K M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 548 ITRDVTNSELXEVVN 592
IT++ + EL + V+
Sbjct: 174 ITKEAASRELTQFVD 188
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 219
I +PF++K+WY+VK P F +R VG +VN+T G +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 126 bits (304), Expect = 4e-28
Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Frame = +2
Query: 167 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 346
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 347 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTXV 517
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ + V
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 518 RXIXKKMCEIITRDVTNSELXE 583
R I +K+ IT + + E
Sbjct: 168 RAIRRKINTFITNEAAKLGIAE 189
Score = 49.2 bits (112), Expect = 7e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 88 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 231
+DP +RK+WYD +AP FS + G TLV ++ GN I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 123 bits (297), Expect = 3e-27
Identities = 53/135 (39%), Positives = 88/135 (65%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ + ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 548 ITRDVTNSELXEVVN 592
I R ++ ++ E V+
Sbjct: 175 IKRRLSKVQIKEAVS 189
Score = 46.0 bits (104), Expect = 7e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 91 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 231
+ RK+WYDV AP+ F KRQ T+ N+TQG + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 123 bits (296), Expect = 4e-27
Identities = 57/134 (42%), Positives = 90/134 (67%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ + ++ I KK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 548 ITRDVTNSELXEVV 589
+ ++V+ + +++
Sbjct: 171 VLKEVSKKSITQLL 184
Score = 36.3 bits (80), Expect = 0.54
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 88 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 219
+DP RK+W+++ AP F+ G T +N++ G I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 115 bits (276), Expect = 1e-24
Identities = 56/105 (53%), Positives = 71/105 (67%)
Frame = +2
Query: 275 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 454
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 455 GFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRDVTNSELXEVV 589
FT K Q+ YAQ T ++ + ++ E++ R+V +L VV
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVV 110
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 95.9 bits (228), Expect = 6e-19
Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Frame = +2
Query: 188 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 367
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 368 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLSQRKTCYAQHTXVRXIXKKMCE 544
V KWQ ++EA+ DVKT D Y+L +FC+G+ TN + R+ AQ+ V I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 545 IITRDVTNSELXEVVN 592
I+ D ++L EV+N
Sbjct: 156 IM--DQRRTDLKEVLN 169
Score = 32.3 bits (70), Expect = 8.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 103 RKDWYDVKAPSMFSKRQVGTTLVNRTQ 183
+KD YDVKA +MF+ R +G T V R Q
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQ 38
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 89.0 bits (211), Expect = 7e-17
Identities = 45/125 (36%), Positives = 73/125 (58%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRDVTNSE 574
IEA D+ DG V RVF +G T + +KTCY +H+ + I K M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 575 LXEVV 589
+ +++
Sbjct: 133 VQKIM 137
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = +2
Query: 191 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 370
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 371 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEII 550
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R + + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 551 TRDV 562
++
Sbjct: 173 HNEL 176
Score = 39.9 bits (89), Expect = 0.044
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 91 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQG 186
DP+ +K+WY V AP+ F R +G T V +T G
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 78.2 bits (184), Expect = 1e-13
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +2
Query: 167 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 346
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 347 LTTDKLRWMVKKWQTLIEANIDVKTTD 427
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 59.3 bits (137), Expect = 7e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 192
+VDPF++KDWYDV AP+MF+ R +G TLV RTQG +
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 78.2 bits (184), Expect = 1e-13
Identities = 38/131 (29%), Positives = 70/131 (53%)
Frame = +2
Query: 200 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 379
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 380 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRD 559
KW TLIE ++ KT DGY L++F I + K + KT Y + R + +++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 560 VTNSELXEVVN 592
N ++ + ++
Sbjct: 172 GINMDIKDFIH 182
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/121 (35%), Positives = 68/121 (56%)
Frame = +2
Query: 191 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 370
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 371 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEII 550
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA R + M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 551 T 553
T
Sbjct: 169 T 169
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 167 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 346
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 347 LTTD 358
L+ D
Sbjct: 105 LSCD 108
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 88 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 225
VD ++KDWYD+KAP+MF+ R +G TLV RTQG + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/110 (30%), Positives = 56/110 (50%)
Frame = +2
Query: 218 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 397
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 398 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEI 547
A +VKT DG V+R+ +G T + +K+ + + + KK E+
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKSA-MRKKMIETLVKKAAEL 161
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/93 (35%), Positives = 51/93 (54%)
Frame = +2
Query: 209 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 388
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 389 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 487
+ I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/92 (31%), Positives = 46/92 (50%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 490
IE +DV T DGY LRV + FT + + +K
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQK 137
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 50.4 bits (115), Expect = 3e-05
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNK 469
I+AN+ V T DG+ +RV I T K
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 33.9 bits (74), Expect = 2.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 88 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 174
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/93 (33%), Positives = 50/93 (53%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 493
I+ +V+T+DGY +RV + ++ S KT
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT 139
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 48.4 bits (110), Expect = 1e-04
Identities = 36/129 (27%), Positives = 60/129 (46%)
Frame = +2
Query: 203 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 382
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 383 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRDV 562
+ I+ IDV T DGY +RV + FT + + + ++ R I K+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTSQQ---------RAIRKEMFKVIEENA 142
Query: 563 TNSELXEVV 589
+ E +
Sbjct: 143 KECDFDEFI 151
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/127 (27%), Positives = 63/127 (49%)
Frame = +2
Query: 209 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 388
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 389 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRDVTN 568
+ + +V T DGY LRV + FT + + KT +Q + +R + +++ E R+ T
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFTRQ----RCKT--SQKSAIRKVMQEIVEQKARESTL 151
Query: 569 SELXEVV 589
EL +++
Sbjct: 152 DELIQLM 158
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 47.6 bits (108), Expect = 2e-04
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = +2
Query: 209 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 388
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 389 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 493
+ I A ++V+T DG+ +RV + T + KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +2
Query: 197 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 376
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 377 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 469
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 490
+EA+I V TTD Y +RV + T K + SQ K
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +2
Query: 212 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 391
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 392 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 490
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 43.2 bits (97), Expect = 0.005
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 395 IEANIDVKTTDGYVLRVFCIGFT 463
I +D+ T DG+ LRV + T
Sbjct: 108 INKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.014
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTT 165
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 41.1 bits (92), Expect = 0.019
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 215 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 394
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 490
+EA I V TTD Y +++ + T K + SQ K
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKKADASQEK 132
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 39.5 bits (88), Expect = 0.058
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +2
Query: 209 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 388
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 389 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 490
+ I+A+ VKT D +++ + T + + S ++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQ 135
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -1
Query: 177 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQ 19
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H +
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 36.3 bits (80), Expect = 0.54
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 203 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 382
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 383 WQTLIEANIDVKTTDG-YVLRVFCIGFT-NKDSLSQ 484
+ +++ I V L+V FT N LSQ
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTINHARLSQ 136
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 35.9 bits (79), Expect = 0.72
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +2
Query: 218 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 394
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 395 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTXVRXIXKKMCEIITRDVTNSE 574
+E +I + T V+ +F + +T +L Y + + +R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 575 L 577
+
Sbjct: 178 I 178
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 34.3 bits (75), Expect = 2.2
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -1
Query: 408 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 229
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 228 SKTLPFNPSEAIFVXLG-TVDKRGADLPLAE-HRRSLDIVPIF 106
++ + E + G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 2.9
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 411 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 247
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.5 bits (73), Expect = 3.8
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -1
Query: 459 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 286
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 285 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVXLG 178
L + + SV + S R S L F P EA+++ +G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 342 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 467
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.3 bits (70), Expect = 8.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 297 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*RQPMDTFYVSSALVSPI 467
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,573,696
Number of Sequences: 1657284
Number of extensions: 11346162
Number of successful extensions: 28781
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 27987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28764
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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