Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K18
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    26   0.32 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.2  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.0  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.0  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 115 FFVENYFIKRTCSLMFHKHNP 53
           F V + FIKR CS +F K  P
Sbjct: 92  FVVPHQFIKRICSALFGKIKP 112


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 LASNYKEDGNFNFKHKNYRLAILGY 573
           + + Y  D +  F   NYRL ILG+
Sbjct: 141 MGAKYLMDSDVIFVTINYRLGILGF 165


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 LASNYKEDGNFNFKHKNYRLAILGY 573
           + + Y  D +  F   NYRL ILG+
Sbjct: 12  MGAKYLMDSDVIFVTINYRLGILGF 36


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 499 LASNYKEDGNFNFKHKNYRLAILGY 573
           + + Y  D +  F   NYRL ILG+
Sbjct: 141 MGAKYLMDSDVIFVTINYRLGILGF 165


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 499 LASNYKEDGNFNFKHKNY 552
           L++NY  + N+N  + NY
Sbjct: 88  LSNNYNYNNNYNNYNNNY 105


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 SNYKEDGNFNFKHKNYR 555
           SNY    N N+ + NY+
Sbjct: 92  SNYNNYNNNNYNNNNYK 108


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 SNYKEDGNFNFKHKNYR 555
           SNY    N N+ + NY+
Sbjct: 92  SNYNNYNNNNYNNNNYK 108


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 SNYKEDGNFNFKHKNYR 555
           SNY    N N+ + NY+
Sbjct: 92  SNYNNYNNNNYNNNNYK 108


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 505 SNYKEDGNFNFKHKNYR 555
           SNY    N N+ + NY+
Sbjct: 92  SNYNNYNNNNYNNNNYK 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,267
Number of Sequences: 438
Number of extensions: 3132
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)