Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K17
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24246 Cluster: Dynein intermediate chain, cytosolic; n...    64   3e-09
UniRef50_Q5LLX9 Cluster: Sugar ABC transporter, permease protein...    35   1.5  
UniRef50_A4SQ01 Cluster: Pentapeptide repeat; n=1; Aeromonas sal...    35   2.0  
UniRef50_A4F9C8 Cluster: Probable alpha-glucosidase; n=1; Saccha...    35   2.0  

>UniRef50_Q24246 Cluster: Dynein intermediate chain, cytosolic;
           n=55; Eumetazoa|Rep: Dynein intermediate chain,
           cytosolic - Drosophila melanogaster (Fruit fly)
          Length = 663

 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 45/115 (39%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
 Frame = +1

Query: 316 DRKAELERKKAKLXXXXXXXXXXXXXXXXXXXXXXLQRASATSSLDS--RRDIDEMLSSL 489
           DRKAELERKKAKL                        R    + +D   R+D+DEMLSSL
Sbjct: 2   DRKAELERKKAKLAALREEKDRRRREKEIKDMEEAAGRIGGGAGIDKDQRKDLDEMLSSL 61

Query: 490 GVAPVKDVXXXXXX--XXXXXPPQTASPDASLPHTDKASLQLQGGPKKQPQELQV 648
           GVAPV +V                T +PDASL    +A++  Q G KKQP  L V
Sbjct: 62  GVAPVSEVLSSLSSVNSMTSDNSNTQTPDASL----QATVNGQSGGKKQPLNLSV 112


>UniRef50_Q5LLX9 Cluster: Sugar ABC transporter, permease protein;
           n=2; Rhodobacteraceae|Rep: Sugar ABC transporter,
           permease protein - Silicibacter pomeroyi
          Length = 285

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -1

Query: 442 MWPMPVAVLLQHLSVLFLCGADLYPLLWRGASPSFAPTQPSDPTCSTSW 296
           M P P A+ L++L VL  C   LYPLLW   + +F P          +W
Sbjct: 1   MKPSPGALALKYLFVLLACAVVLYPLLWM-VTMAFKPYPEWTTVAGLTW 48


>UniRef50_A4SQ01 Cluster: Pentapeptide repeat; n=1; Aeromonas
           salmonicida subsp. salmonicida A449|Rep: Pentapeptide
           repeat - Aeromonas salmonicida (strain A449)
          Length = 282

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -1

Query: 637 LEVASLDRLAIVGWLYLYAVNWHLERLSEVETAKSLMIKKRGHP*LEPLQAR 482
           L  A LD + ++G      + WH  RL  + T K LM ++RG    +P QAR
Sbjct: 113 LHCAELDNVNLLG------IRWHNTRLDNLNTGKRLMQERRGRSERDPAQAR 158


>UniRef50_A4F9C8 Cluster: Probable alpha-glucosidase; n=1;
           Saccharopolyspora erythraea NRRL 2338|Rep: Probable
           alpha-glucosidase - Saccharopolyspora erythraea (strain
           NRRL 23338)
          Length = 346

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 433 MPVAVLLQHLSVLFLCGADLYPLLWRGASPSFA-PTQPSD-PTCSTSW*LLINTAKISTS 260
           +P A  L+H   L L GA   P+ W G  P F    +P + P+ S  W      A++   
Sbjct: 204 LPGAACLRHGEELGLPGAQRIPMPWEGQDPPFGFSERPGEWPSISADWASFTVEAQLEDP 263

Query: 259 ESY**LYR 236
           ES   LYR
Sbjct: 264 ESTLSLYR 271


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,425,364
Number of Sequences: 1657284
Number of extensions: 10453282
Number of successful extensions: 25180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25155
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)