Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K17
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0315 + 20803035-20803154,20803235-20804089,20804171-208043...    29   3.2  
01_06_1147 + 34892415-34893702,34894051-34894676                       28   7.5  
07_03_0189 + 14862848-14862904,14862936-14863071,14864436-148645...    27   9.9  

>01_05_0315 +
           20803035-20803154,20803235-20804089,20804171-20804350,
           20805191-20805286,20805895-20806179
          Length = 511

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 479 CPRLEWLQLRMSSLLYHQ*LRCLHLRQPL-QMPVYRIQ 589
           CP LEWL++ M S L++     LH+ +PL ++   R+Q
Sbjct: 219 CPALEWLEILMCSQLHN-----LHVSEPLPRLEFLRVQ 251


>01_06_1147 + 34892415-34893702,34894051-34894676
          Length = 637

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 394 FLCGADLYPLLWRGASPSFAPTQPS 320
           FLCG  L P      SPS +PT PS
Sbjct: 219 FLCGFPLQPCPGTAPSPSPSPTSPS 243


>07_03_0189 +
           14862848-14862904,14862936-14863071,14864436-14864593,
           14864640-14865533,14865634-14865792,14866342-14866623
          Length = 561

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 479 CPRLEWLQLRMSSLLYH 529
           CP LEWL +RM S L++
Sbjct: 309 CPALEWLTIRMCSQLHN 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,688
Number of Sequences: 37544
Number of extensions: 288027
Number of successful extensions: 704
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)