Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K15
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 215 2e-56
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 3e-32
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 135 3e-32
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 135 3e-32
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 121 4e-28
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 74 7e-14
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 50 1e-06
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 44 9e-05
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 37 0.010
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 35 0.055
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 34 0.072
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.29
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.39
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.89
SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8) 29 2.1
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 2.7
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 4.8
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 28 6.3
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 6.3
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 6.3
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 27 8.3
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 8.3
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 27 8.3
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 8.3
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 8.3
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 8.3
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 8.3
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 8.3
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 8.3
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 27 8.3
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 27 8.3
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 215 bits (526), Expect = 2e-56
Identities = 107/146 (73%), Positives = 111/146 (76%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 240 STLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGE 419
STLHLV NY+TP LAVL++YKVDENGKI RLRREC E
Sbjct: 65 STLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSE 124
Query: 420 QCGAGVFMAVMEDRHYCGKCHSTMVF 497
CGAGVFMA DR YCGKC T VF
Sbjct: 125 SCGAGVFMASHFDRQYCGKCCLTYVF 150
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 240 STLHLV 257
STLHLV
Sbjct: 369 STLHLV 374
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 385 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 240 STLHLV 257
STLHLV
Sbjct: 445 STLHLV 450
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 461 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520
Query: 240 STLHLV 257
STLHLV
Sbjct: 521 STLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 240 STLHLV 257
STLHLV
Sbjct: 369 STLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 135 bits (326), Expect = 3e-32
Identities = 65/66 (98%), Positives = 66/66 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = +3
Query: 78 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL
Sbjct: 86 KTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 121 bits (292), Expect = 4e-28
Identities = 58/59 (98%), Positives = 59/59 (100%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 236
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 83 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +3
Query: 153 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
IPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 57 SVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 233
+V TLTG+ I + + P TI VK I+ K G P +QQRL+F G+ L D T I
Sbjct: 74 AVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIF 133
Query: 234 KESTLHLV 257
+TLHL+
Sbjct: 134 AGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +3
Query: 63 KTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 233
KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L +YNI
Sbjct: 72 KTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNID 131
Query: 234 KES 242
++S
Sbjct: 132 EKS 134
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYN 227
K +V G TL+V +EN +A ++ + G+P ++ L G QL D +TL+ Y+
Sbjct: 2 KVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYS 61
Query: 228 IQKESTLHLV 257
+++ + +V
Sbjct: 62 VKENDVILMV 71
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 144 KEGIPPNQQRLIFAGKQLEDGRTLSDYN 227
+EGIP +QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 123 VKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 236
+K++I+ K GIP + QRL F K+L D TL+ N+++
Sbjct: 32 LKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 72 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 236
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
++TLTG L V P +TI +VKAKIQ E
Sbjct: 5 IQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 150 GIPPNQQRLIFAGKQLEDGRTLSDYN 227
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 39 E*RCKFSVKTLT-----GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 203
E R KF+ KT+ G T+ +E+ ++E++KA+ + + GIP RL LED
Sbjct: 175 EYRLKFARKTMLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLED 234
Query: 204 GRTLSDYNIQKEST 245
+ + +++T
Sbjct: 235 SEKICERGHLQKAT 248
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 254
T+ ++K + +K G+ + RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 75 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
G+ ITL P + ++ + G P ++ K LED T++D + Q +TL +
Sbjct: 175 GQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQPGATLQI 234
>SB_5154| Best HMM Match : zf-C2H2 (HMM E-Value=1.8)
Length = 180
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 101 AVRYHRECES*NSRQRGNPSQSTEVDLCWKAAGRWTYPLGLQY 229
+ Y +E E + RQR +S E D+C K R+T Y
Sbjct: 39 STEYTQESEGLDERQRARGKKSFECDICGKCFSRFTITTKYNY 81
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGR---TLSDYN 227
+V + G+T + P +I +K KI + +QRL++ +L++ + LS++
Sbjct: 59 TVAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFG 118
Query: 228 IQKESTLHLV 257
+ +T+ L+
Sbjct: 119 VPPYATISLI 128
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 375 ENGKIHRLRRECTGEQC 425
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 470 AVVTVLHHRHEHSGA 426
A++TV+HHRH H A
Sbjct: 525 AIITVIHHRHHHHPA 539
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 143 QRGNPSQSTEVDLCWKAAGRWTYPLGLQYPEGIHPPPGVEAS 268
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 464
YK D GK+ L+R C ++C ++ V D +
Sbjct: 364 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 397
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHS 485
YK D GK+ L+R C ++C + + C +C S
Sbjct: 515 YKCDNCGKVGHLKRVCQSKECKKXXXXQGGKPKTACHRCGS 555
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 568 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 599
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRH 464
YK D GK+ L+R C ++C ++ V D +
Sbjct: 207 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVDNN 240
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 63 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 94
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 69 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE 200
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 372 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 403
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 898 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 929
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 245 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 276
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 202 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 233
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 229 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 260
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 66 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 97
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 268 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 299
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 363 YKVDENGKIHRLRRECTGEQCGAGVFMAVMED 458
YK D GK+ L+R C ++C ++ V D
Sbjct: 428 YKCDNCGKVGHLKRVCQSKECKETKYVEVSVD 459
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,269,956
Number of Sequences: 59808
Number of extensions: 344449
Number of successful extensions: 916
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -